RNA–Protein interactions for RNA: ENST00000529011.1

TRIM29-211, Transcript of tripartite motif containing 29, humanhuman

TSL 4

Gene TRIM29, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-211ENST00000529011 NISCHQ9Y2I1 1504 aa24.89■■□□□ 1.57
TRIM29-211ENST00000529011 CCDC180Q9P1Z9 1646 aa21.98■■□□□ 1.11
TRIM29-211ENST00000529011 ABCC9O60706 1549 aa21.78■■□□□ 1.08
TRIM29-211ENST00000529011 DCAF8L2P0C7V8 631 aa21.07■□□□□ 0.96
TRIM29-211ENST00000529011 RB1CC1Q8TDY2 1594 aa20.82■□□□□ 0.92
TRIM29-211ENST00000529011 NACADO15069 1562 aa20.8■□□□□ 0.92
TRIM29-211ENST00000529011 ZCCHC6Q5VYS8 1495 aaKnown RBP20.68■□□□□ 0.9
TRIM29-211ENST00000529011 MYO15BQ96JP2 1530 aa20.64■□□□□ 0.9
TRIM29-211ENST00000529011 DCAF1Q9Y4B6 1507 aa20.53■□□□□ 0.88
TRIM29-211ENST00000529011 CHIC1Q5VXU3 224 aa20.53■□□□□ 0.88
TRIM29-211ENST00000529011 PABPN1Q86U42 306 aaKnown RBP eCLIP20.47■□□□□ 0.87
TRIM29-211ENST00000529011 UNC13AQ9UPW8 1703 aa20.21■□□□□ 0.83
TRIM29-211ENST00000529011 BICRAQ9NZM4 1560 aa20.19■□□□□ 0.82
TRIM29-211ENST00000529011 SCRIBQ14160 1630 aa20.16■□□□□ 0.82
TRIM29-211ENST00000529011 DNAJC5BQ9UF47 199 aa20.16■□□□□ 0.82
TRIM29-211ENST00000529011 AEBP2Q6ZN18 517 aaPredicted RBP20.05■□□□□ 0.8
TRIM29-211ENST00000529011 SHROOM4Q9ULL8 1493 aa19.92■□□□□ 0.78
TRIM29-211ENST00000529011 EIF4G1Q04637 1599 aaKnown RBP19.68■□□□□ 0.74
TRIM29-211ENST00000529011 CC2D2AQ9P2K1 1620 aa19.61■□□□□ 0.73
TRIM29-211ENST00000529011 CECR2Q9BXF3 1484 aa19.56■□□□□ 0.72
TRIM29-211ENST00000529011 NCAPD3P42695 1498 aa19.27■□□□□ 0.67
TRIM29-211ENST00000529011 ATAD2BQ9ULI0 1458 aa19.26■□□□□ 0.67
TRIM29-211ENST00000529011 BAZ1AQ9NRL2 1556 aaPredicted RBP19.26■□□□□ 0.67
TRIM29-211ENST00000529011 SMARCA4P51532 1647 aa19.25■□□□□ 0.67
TRIM29-211ENST00000529011 MROH2BQ7Z745 1585 aa19.19■□□□□ 0.66
TRIM29-211ENST00000529011 SMARCA2P51531 1590 aa19.17■□□□□ 0.66
TRIM29-211ENST00000529011 BAZ1BQ9UIG0 1483 aaKnown RBP19.08■□□□□ 0.64
TRIM29-211ENST00000529011 PEG3Q9GZU2 1588 aa19.06■□□□□ 0.64
TRIM29-211ENST00000529011 HMGXB3Q12766 1538 aa19.05■□□□□ 0.64
TRIM29-211ENST00000529011 RSF1Q96T23 1441 aaPredicted RBP19■□□□□ 0.63
TRIM29-211ENST00000529011 WIZO95785 1651 aa18.92■□□□□ 0.62
TRIM29-211ENST00000529011 NESP48681 1621 aa18.82■□□□□ 0.6
TRIM29-211ENST00000529011 ERCC6Q03468 1493 aa18.77■□□□□ 0.59
TRIM29-211ENST00000529011 CADPSQ9ULU8 1353 aa18.74■□□□□ 0.59
TRIM29-211ENST00000529011 TOP2AP11388 1531 aaKnown RBP18.72■□□□□ 0.59
TRIM29-211ENST00000529011 LAMC3Q9Y6N6 1575 aa18.68■□□□□ 0.58
TRIM29-211ENST00000529011 PDS5BQ9NTI5 1447 aa18.66■□□□□ 0.58
TRIM29-211ENST00000529011 SUPT5HO00267 1087 aaKnown RBP18.62■□□□□ 0.57
TRIM29-211ENST00000529011 CCDC88BA6NC98 1476 aa18.6■□□□□ 0.57
TRIM29-211ENST00000529011 CFTRP13569 1480 aa18.57■□□□□ 0.56
TRIM29-211ENST00000529011 CUX2O14529 1486 aa18.52■□□□□ 0.56
TRIM29-211ENST00000529011 FANCD2Q9BXW9 1451 aa18.47■□□□□ 0.55
TRIM29-211ENST00000529011 KIF21AQ7Z4S6 1674 aa18.44■□□□□ 0.54
TRIM29-211ENST00000529011 CEP164Q9UPV0 1460 aa18.43■□□□□ 0.54
TRIM29-211ENST00000529011 MRC2Q9UBG0 1479 aa18.41■□□□□ 0.54
TRIM29-211ENST00000529011 THOC2Q8NI27 1593 aaKnown RBP18.41■□□□□ 0.54
TRIM29-211ENST00000529011 WDR62O43379 1518 aa18.3■□□□□ 0.52
TRIM29-211ENST00000529011 URB2Q14146 1524 aaKnown RBP18.28■□□□□ 0.52
TRIM29-211ENST00000529011 DNAJC5Q9H3Z4 198 aa18.19■□□□□ 0.5
TRIM29-211ENST00000529011 ABCC8Q09428 1581 aa18.17■□□□□ 0.5
TRIM29-211ENST00000529011 PRDM2Q13029 1718 aa18.16■□□□□ 0.5
TRIM29-211ENST00000529011 TOPBP1Q92547 1522 aa18.15■□□□□ 0.5
TRIM29-211ENST00000529011 PHF23Q9BUL5 403 aaPredicted RBP18.14■□□□□ 0.49
TRIM29-211ENST00000529011 DNMBPQ6XZF7 1577 aa18.08■□□□□ 0.48
TRIM29-211ENST00000529011 IFT140Q96RY7 1462 aa18.07■□□□□ 0.48
TRIM29-211ENST00000529011 SOGA1O94964 1423 aa18.01■□□□□ 0.47
TRIM29-211ENST00000529011 ZNF608Q9ULD9 1512 aaPredicted RBP18.01■□□□□ 0.47
TRIM29-211ENST00000529011 POLA1P09884 1462 aaPredicted RBP18■□□□□ 0.47
TRIM29-211ENST00000529011 CUX1P39880 1505 aa17.98■□□□□ 0.47
TRIM29-211ENST00000529011 RAD54L2Q9Y4B4 1467 aa17.98■□□□□ 0.47
TRIM29-211ENST00000529011 FGD5Q6ZNL6 1462 aa17.95■□□□□ 0.46
TRIM29-211ENST00000529011 AQRO60306 1485 aaKnown RBP eCLIP17.95■□□□□ 0.46
TRIM29-211ENST00000529011 TDRD9Q8NDG6 1382 aaKnown RBP17.94■□□□□ 0.46
TRIM29-211ENST00000529011 OSCARQ8IYS5 282 aa17.93■□□□□ 0.46
TRIM29-211ENST00000529011 WRNQ14191 1432 aaPredicted RBP eCLIP17.9■□□□□ 0.46
TRIM29-211ENST00000529011 TARBP1Q13395 1621 aaKnown RBP17.9■□□□□ 0.46
TRIM29-211ENST00000529011 FBLN2P98095 1184 aa17.84■□□□□ 0.45
TRIM29-211ENST00000529011 EIF4G3O43432 1585 aaKnown RBP17.82■□□□□ 0.44
TRIM29-211ENST00000529011 SYNJ1O43426 1573 aa17.78■□□□□ 0.44
TRIM29-211ENST00000529011 TOP2BQ02880 1626 aa17.77■□□□□ 0.44
TRIM29-211ENST00000529011 ABCA10Q8WWZ4 1543 aa17.77■□□□□ 0.43
TRIM29-211ENST00000529011 CHMP7Q8WUX9 453 aaPredicted RBP17.76■□□□□ 0.43
TRIM29-211ENST00000529011 GAPVD1Q14C86 1478 aa17.75■□□□□ 0.43
TRIM29-211ENST00000529011 GRIN2BQ13224 1484 aa17.74■□□□□ 0.43
TRIM29-211ENST00000529011 BIVM-ERCC5R4GMW8 1640 aa17.72■□□□□ 0.43
TRIM29-211ENST00000529011 SNAPC4Q5SXM2 1469 aa17.7■□□□□ 0.42
TRIM29-211ENST00000529011 WDR97A6NE52 1622 aa17.7■□□□□ 0.42
TRIM29-211ENST00000529011 MAGI1Q96QZ7 1491 aaPredicted RBP17.66■□□□□ 0.42
TRIM29-211ENST00000529011 SYNJ2O15056 1496 aa17.62■□□□□ 0.41
TRIM29-211ENST00000529011 ABCA5Q8WWZ7 1642 aa17.61■□□□□ 0.41
TRIM29-211ENST00000529011 TRIM41Q8WV44 630 aa17.6■□□□□ 0.41
TRIM29-211ENST00000529011 CHD1O14646 1710 aa17.55■□□□□ 0.4
TRIM29-211ENST00000529011 FHAD1B1AJZ9 1412 aa17.55■□□□□ 0.4
TRIM29-211ENST00000529011 KIF27Q86VH2 1401 aa17.55■□□□□ 0.4
TRIM29-211ENST00000529011 IGF1RP08069 1367 aa17.54■□□□□ 0.4
TRIM29-211ENST00000529011 PBRM1Q86U86 1689 aa17.53■□□□□ 0.4
TRIM29-211ENST00000529011 ERICH3Q5RHP9 1530 aa17.52■□□□□ 0.4
TRIM29-211ENST00000529011 CYB5RLQ6IPT4 315 aa17.5■□□□□ 0.39
TRIM29-211ENST00000529011 GRIN2AQ12879 1464 aa17.49■□□□□ 0.39
TRIM29-211ENST00000529011 ARHGEF11O15085 1522 aa17.47■□□□□ 0.39
TRIM29-211ENST00000529011 ADAMTS12P58397 1594 aa17.45■□□□□ 0.38
TRIM29-211ENST00000529011 RIMBP3CA6NJZ7 1639 aa17.43■□□□□ 0.38
TRIM29-211ENST00000529011 RIMBP3BA6NNM3 1639 aa17.43■□□□□ 0.38
TRIM29-211ENST00000529011 RIMBP3Q9UFD9 1639 aa17.43■□□□□ 0.38
TRIM29-211ENST00000529011 CLASP1Q7Z460 1538 aa17.43■□□□□ 0.38
TRIM29-211ENST00000529011 CARMIL1Q5VZK9 1371 aa17.42■□□□□ 0.38
TRIM29-211ENST00000529011 NUP160Q12769 1436 aa17.42■□□□□ 0.38
TRIM29-211ENST00000529011 RUSC2Q8N2Y8 1516 aa17.39■□□□□ 0.37
TRIM29-211ENST00000529011 JPH4Q96JJ6 628 aa17.39■□□□□ 0.37
TRIM29-211ENST00000529011 CEP170Q5SW79 1584 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms