RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 NISCHQ9Y2I1 1504 aa48.61■■■■■ 5.37
SSRP1-204ENST00000529002 ABCC9O60706 1549 aa44.65■■■■■ 4.74
SSRP1-204ENST00000529002 CCDC180Q9P1Z9 1646 aa43.86■■■■■ 4.61
SSRP1-204ENST00000529002 DNAJC5BQ9UF47 199 aa42.54■■■■■ 4.4
SSRP1-204ENST00000529002 RB1CC1Q8TDY2 1594 aa42.07■■■■■ 4.33
SSRP1-204ENST00000529002 NACADO15069 1562 aa41.59■■■■■ 4.25
SSRP1-204ENST00000529002 PABPN1Q86U42 306 aaKnown RBP eCLIP41.49■■■■■ 4.23
SSRP1-204ENST00000529002 DCAF8L2P0C7V8 631 aa41.44■■■■■ 4.22
SSRP1-204ENST00000529002 UNC13AQ9UPW8 1703 aa41.32■■■■■ 4.21
SSRP1-204ENST00000529002 BICRAQ9NZM4 1560 aa40.99■■■■■ 4.15
SSRP1-204ENST00000529002 MYO15BQ96JP2 1530 aa40.72■■■■■ 4.11
SSRP1-204ENST00000529002 CC2D2AQ9P2K1 1620 aa40.27■■■■■ 4.04
SSRP1-204ENST00000529002 CECR2Q9BXF3 1484 aa40.21■■■■■ 4.03
SSRP1-204ENST00000529002 ZCCHC6Q5VYS8 1495 aaKnown RBP40.13■■■■■ 4.02
SSRP1-204ENST00000529002 SHROOM4Q9ULL8 1493 aa40.09■■■■■ 4.01
SSRP1-204ENST00000529002 SCRIBQ14160 1630 aa40.07■■■■■ 4.01
SSRP1-204ENST00000529002 DCAF1Q9Y4B6 1507 aa40■■■■□ 3.99
SSRP1-204ENST00000529002 EIF4G1Q04637 1599 aaKnown RBP39.97■■■■□ 3.99
SSRP1-204ENST00000529002 DNAJC5Q9H3Z4 198 aa39.38■■■■□ 3.89
SSRP1-204ENST00000529002 CUX2O14529 1486 aa38.58■■■■□ 3.77
SSRP1-204ENST00000529002 ERCC6Q03468 1493 aa38.5■■■■□ 3.75
SSRP1-204ENST00000529002 NCAPD3P42695 1498 aa38.42■■■■□ 3.74
SSRP1-204ENST00000529002 ATAD2BQ9ULI0 1458 aa38.27■■■■□ 3.72
SSRP1-204ENST00000529002 NESP48681 1621 aa38.2■■■■□ 3.71
SSRP1-204ENST00000529002 SMARCA4P51532 1647 aa38.09■■■■□ 3.69
SSRP1-204ENST00000529002 HMGXB3Q12766 1538 aa38.07■■■■□ 3.68
SSRP1-204ENST00000529002 SMARCA2P51531 1590 aa38.06■■■■□ 3.68
SSRP1-204ENST00000529002 THOC2Q8NI27 1593 aaKnown RBP37.88■■■■□ 3.65
SSRP1-204ENST00000529002 BAZ1BQ9UIG0 1483 aaKnown RBP37.85■■■■□ 3.65
SSRP1-204ENST00000529002 BAZ1AQ9NRL2 1556 aaPredicted RBP37.73■■■■□ 3.63
SSRP1-204ENST00000529002 KIF21AQ7Z4S6 1674 aa37.69■■■■□ 3.62
SSRP1-204ENST00000529002 LAMC3Q9Y6N6 1575 aa37.66■■■■□ 3.62
SSRP1-204ENST00000529002 PEG3Q9GZU2 1588 aa37.64■■■■□ 3.62
SSRP1-204ENST00000529002 MROH2BQ7Z745 1585 aa37.53■■■■□ 3.6
SSRP1-204ENST00000529002 TRIM41Q8WV44 630 aa37.5■■■■□ 3.59
SSRP1-204ENST00000529002 PDS5BQ9NTI5 1447 aa37.44■■■■□ 3.58
SSRP1-204ENST00000529002 CADPSQ9ULU8 1353 aa37.24■■■■□ 3.55
SSRP1-204ENST00000529002 MRC2Q9UBG0 1479 aa37.21■■■■□ 3.55
SSRP1-204ENST00000529002 WDR62O43379 1518 aa37.15■■■■□ 3.54
SSRP1-204ENST00000529002 WIZO95785 1651 aa37.09■■■■□ 3.53
SSRP1-204ENST00000529002 CEP164Q9UPV0 1460 aa36.93■■■■□ 3.5
SSRP1-204ENST00000529002 FANCD2Q9BXW9 1451 aa36.86■■■■□ 3.49
SSRP1-204ENST00000529002 OSCARQ8IYS5 282 aa36.75■■■■□ 3.47
SSRP1-204ENST00000529002 CFTRP13569 1480 aa36.68■■■■□ 3.46
SSRP1-204ENST00000529002 URB2Q14146 1524 aaKnown RBP36.65■■■■□ 3.46
SSRP1-204ENST00000529002 RSF1Q96T23 1441 aaPredicted RBP36.46■■■■□ 3.43
SSRP1-204ENST00000529002 RIMBP3CA6NJZ7 1639 aa36.45■■■■□ 3.43
SSRP1-204ENST00000529002 RIMBP3BA6NNM3 1639 aa36.45■■■■□ 3.43
SSRP1-204ENST00000529002 RIMBP3Q9UFD9 1639 aa36.45■■■■□ 3.43
SSRP1-204ENST00000529002 TOP2AP11388 1531 aaKnown RBP36.45■■■■□ 3.43
SSRP1-204ENST00000529002 PRDM2Q13029 1718 aa36.34■■■■□ 3.41
SSRP1-204ENST00000529002 ZNF608Q9ULD9 1512 aaPredicted RBP36.34■■■■□ 3.41
SSRP1-204ENST00000529002 ARHGEF11O15085 1522 aa36.23■■■■□ 3.39
SSRP1-204ENST00000529002 IFT140Q96RY7 1462 aa36.18■■■■□ 3.38
SSRP1-204ENST00000529002 TOPBP1Q92547 1522 aa36.11■■■■□ 3.37
SSRP1-204ENST00000529002 CCDC88BA6NC98 1476 aa36.1■■■■□ 3.37
SSRP1-204ENST00000529002 EIF4G3O43432 1585 aaKnown RBP36.06■■■■□ 3.36
SSRP1-204ENST00000529002 CYB5RLQ6IPT4 315 aa36.04■■■■□ 3.36
SSRP1-204ENST00000529002 CHD1O14646 1710 aa35.99■■■■□ 3.35
SSRP1-204ENST00000529002 AQRO60306 1485 aaKnown RBP eCLIP35.91■■■■□ 3.341e-8■■■■■ 37.7
SSRP1-204ENST00000529002 DNMBPQ6XZF7 1577 aa35.89■■■■□ 3.34
SSRP1-204ENST00000529002 TARBP1Q13395 1621 aaKnown RBP35.85■■■■□ 3.33
SSRP1-204ENST00000529002 ARAP1Q96P48 1450 aa35.85■■■■□ 3.33
SSRP1-204ENST00000529002 TRHP20396 242 aaPredicted RBP35.84■■■■□ 3.33
SSRP1-204ENST00000529002 ABCC8Q09428 1581 aa35.84■■■■□ 3.33
SSRP1-204ENST00000529002 FBLN2P98095 1184 aa35.81■■■■□ 3.32
SSRP1-204ENST00000529002 POLA1P09884 1462 aaPredicted RBP35.69■■■■□ 3.3
SSRP1-204ENST00000529002 RAD54L2Q9Y4B4 1467 aa35.66■■■■□ 3.3
SSRP1-204ENST00000529002 TDRD9Q8NDG6 1382 aaKnown RBP35.58■■■■□ 3.29
SSRP1-204ENST00000529002 SOGA1O94964 1423 aa35.5■■■■□ 3.27
SSRP1-204ENST00000529002 SNAPC4Q5SXM2 1469 aa35.48■■■■□ 3.27
SSRP1-204ENST00000529002 CLASP1Q7Z460 1538 aa35.46■■■■□ 3.27
SSRP1-204ENST00000529002 FGD5Q6ZNL6 1462 aa35.4■■■■□ 3.26
SSRP1-204ENST00000529002 CHMP7Q8WUX9 453 aaPredicted RBP35.36■■■■□ 3.25
SSRP1-204ENST00000529002 SYNJ1O43426 1573 aa35.33■■■■□ 3.25
SSRP1-204ENST00000529002 CUX1P39880 1505 aa35.28■■■■□ 3.24
SSRP1-204ENST00000529002 WDR97A6NE52 1622 aa35.27■■■■□ 3.24
SSRP1-204ENST00000529002 MAGI1Q96QZ7 1491 aaPredicted RBP35.27■■■■□ 3.24
SSRP1-204ENST00000529002 GRIN2BQ13224 1484 aa35.23■■■■□ 3.23
SSRP1-204ENST00000529002 AEBP2Q6ZN18 517 aaPredicted RBP35.22■■■■□ 3.23
SSRP1-204ENST00000529002 SYNJ2O15056 1496 aa35.19■■■■□ 3.22
SSRP1-204ENST00000529002 PBRM1Q86U86 1689 aa35.16■■■■□ 3.22
SSRP1-204ENST00000529002 GAPVD1Q14C86 1478 aa35.12■■■■□ 3.21
SSRP1-204ENST00000529002 ERCC6L2Q5T890 1561 aa34.99■■■■□ 3.19
SSRP1-204ENST00000529002 ABCA5Q8WWZ7 1642 aa34.95■■■■□ 3.18
SSRP1-204ENST00000529002 ABCA10Q8WWZ4 1543 aa34.9■■■■□ 3.18
SSRP1-204ENST00000529002 GRIN2AQ12879 1464 aa34.81■■■■□ 3.16
SSRP1-204ENST00000529002 CEP170Q5SW79 1584 aa34.79■■■■□ 3.16
SSRP1-204ENST00000529002 ADAMTS12P58397 1594 aa34.74■■■■□ 3.15
SSRP1-204ENST00000529002 NUP160Q12769 1436 aa34.7■■■■□ 3.15
SSRP1-204ENST00000529002 KIF13AQ9H1H9 1805 aa34.66■■■■□ 3.14
SSRP1-204ENST00000529002 SHROOM2Q13796 1616 aa34.66■■■■□ 3.14
SSRP1-204ENST00000529002 WRNQ14191 1432 aaPredicted RBP eCLIP34.6■■■■□ 3.13
SSRP1-204ENST00000529002 FHAD1B1AJZ9 1412 aa34.54■■■■□ 3.12
SSRP1-204ENST00000529002 BIVM-ERCC5R4GMW8 1640 aa34.51■■■■□ 3.11
SSRP1-204ENST00000529002 TOP2BQ02880 1626 aa34.48■■■■□ 3.11
SSRP1-204ENST00000529002 SUPT5HO00267 1087 aaKnown RBP34.47■■■■□ 3.11
SSRP1-204ENST00000529002 PRG4Q92954 1404 aaPredicted RBP34.47■■■■□ 3.11
SSRP1-204ENST00000529002 ERICH3Q5RHP9 1530 aa34.41■■■■□ 3.1
SSRP1-204ENST00000529002 JPH4Q96JJ6 628 aa34.37■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms