RNA–Protein interactions for RNA: ENST00000528979.1

SLC39A13-208, Transcript of solute carrier family 39 member 13, humanhuman

TSL 2

Gene SLC39A13, Length 499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A13-208ENST00000528979 NISCHQ9Y2I1 1504 aa36.49■■■■□ 3.43
SLC39A13-208ENST00000528979 ABCC9O60706 1549 aa33.59■■■□□ 2.97
SLC39A13-208ENST00000528979 CCDC180Q9P1Z9 1646 aa32.84■■■□□ 2.85
SLC39A13-208ENST00000528979 DNAJC5BQ9UF47 199 aa32.04■■■□□ 2.72
SLC39A13-208ENST00000528979 RB1CC1Q8TDY2 1594 aa31.61■■■□□ 2.65
SLC39A13-208ENST00000528979 DCAF8L2P0C7V8 631 aa31.3■■■□□ 2.6
SLC39A13-208ENST00000528979 PABPN1Q86U42 306 aaKnown RBP eCLIP31.29■■■□□ 2.6
SLC39A13-208ENST00000528979 NACADO15069 1562 aa31.25■■■□□ 2.59
SLC39A13-208ENST00000528979 UNC13AQ9UPW8 1703 aa30.82■■■□□ 2.52
SLC39A13-208ENST00000528979 BICRAQ9NZM4 1560 aa30.72■■■□□ 2.51
SLC39A13-208ENST00000528979 MYO15BQ96JP2 1530 aa30.58■■■□□ 2.49
SLC39A13-208ENST00000528979 CECR2Q9BXF3 1484 aa30.28■■■□□ 2.44
SLC39A13-208ENST00000528979 CC2D2AQ9P2K1 1620 aa30.22■■■□□ 2.43
SLC39A13-208ENST00000528979 SHROOM4Q9ULL8 1493 aa30.15■■■□□ 2.42
SLC39A13-208ENST00000528979 ZCCHC6Q5VYS8 1495 aaKnown RBP30.11■■■□□ 2.41
SLC39A13-208ENST00000528979 SCRIBQ14160 1630 aa30.06■■■□□ 2.4
SLC39A13-208ENST00000528979 EIF4G1Q04637 1599 aaKnown RBP30.03■■■□□ 2.4
SLC39A13-208ENST00000528979 DCAF1Q9Y4B6 1507 aa30.02■■■□□ 2.4
SLC39A13-208ENST00000528979 DNAJC5Q9H3Z4 198 aa29.75■■■□□ 2.35
SLC39A13-208ENST00000528979 CUX2O14529 1486 aa29.05■■■□□ 2.24
SLC39A13-208ENST00000528979 ERCC6Q03468 1493 aa29.03■■■□□ 2.24
SLC39A13-208ENST00000528979 NCAPD3P42695 1498 aa28.91■■■□□ 2.22
SLC39A13-208ENST00000528979 ATAD2BQ9ULI0 1458 aa28.77■■■□□ 2.2
SLC39A13-208ENST00000528979 NESP48681 1621 aa28.7■■■□□ 2.19
SLC39A13-208ENST00000528979 SMARCA2P51531 1590 aa28.6■■■□□ 2.17
SLC39A13-208ENST00000528979 HMGXB3Q12766 1538 aa28.58■■■□□ 2.17
SLC39A13-208ENST00000528979 SMARCA4P51532 1647 aa28.55■■■□□ 2.16
SLC39A13-208ENST00000528979 BAZ1BQ9UIG0 1483 aaKnown RBP28.46■■■□□ 2.15
SLC39A13-208ENST00000528979 THOC2Q8NI27 1593 aaKnown RBP28.39■■■□□ 2.14
SLC39A13-208ENST00000528979 TRIM41Q8WV44 630 aa28.35■■■□□ 2.13
SLC39A13-208ENST00000528979 BAZ1AQ9NRL2 1556 aaPredicted RBP28.34■■■□□ 2.13
SLC39A13-208ENST00000528979 LAMC3Q9Y6N6 1575 aa28.29■■■□□ 2.12
SLC39A13-208ENST00000528979 PDS5BQ9NTI5 1447 aa28.23■■■□□ 2.11
SLC39A13-208ENST00000528979 PEG3Q9GZU2 1588 aa28.22■■■□□ 2.11
SLC39A13-208ENST00000528979 KIF21AQ7Z4S6 1674 aa28.19■■■□□ 2.1
SLC39A13-208ENST00000528979 MROH2BQ7Z745 1585 aa28.16■■■□□ 2.1
SLC39A13-208ENST00000528979 CADPSQ9ULU8 1353 aa28.05■■■□□ 2.08
SLC39A13-208ENST00000528979 MRC2Q9UBG0 1479 aa27.99■■■□□ 2.07
SLC39A13-208ENST00000528979 WDR62O43379 1518 aa27.89■■■□□ 2.06
SLC39A13-208ENST00000528979 CEP164Q9UPV0 1460 aa27.78■■■□□ 2.04
SLC39A13-208ENST00000528979 OSCARQ8IYS5 282 aa27.77■■■□□ 2.04
SLC39A13-208ENST00000528979 WIZO95785 1651 aa27.77■■■□□ 2.04
SLC39A13-208ENST00000528979 FANCD2Q9BXW9 1451 aa27.73■■■□□ 2.03
SLC39A13-208ENST00000528979 CFTRP13569 1480 aa27.57■■■□□ 2
SLC39A13-208ENST00000528979 URB2Q14146 1524 aaKnown RBP27.52■■■□□ 2
SLC39A13-208ENST00000528979 RSF1Q96T23 1441 aaPredicted RBP27.4■■□□□ 1.98
SLC39A13-208ENST00000528979 RIMBP3CA6NJZ7 1639 aa27.36■■□□□ 1.97
SLC39A13-208ENST00000528979 RIMBP3BA6NNM3 1639 aa27.36■■□□□ 1.97
SLC39A13-208ENST00000528979 RIMBP3Q9UFD9 1639 aa27.36■■□□□ 1.97
SLC39A13-208ENST00000528979 TOP2AP11388 1531 aaKnown RBP27.35■■□□□ 1.97
SLC39A13-208ENST00000528979 ZNF608Q9ULD9 1512 aaPredicted RBP27.31■■□□□ 1.96
SLC39A13-208ENST00000528979 ARHGEF11O15085 1522 aa27.25■■□□□ 1.95
SLC39A13-208ENST00000528979 IFT140Q96RY7 1462 aa27.24■■□□□ 1.95
SLC39A13-208ENST00000528979 CYB5RLQ6IPT4 315 aa27.22■■□□□ 1.95
SLC39A13-208ENST00000528979 CCDC88BA6NC98 1476 aa27.13■■□□□ 1.93
SLC39A13-208ENST00000528979 TOPBP1Q92547 1522 aa27.12■■□□□ 1.93
SLC39A13-208ENST00000528979 TRHP20396 242 aaPredicted RBP27.12■■□□□ 1.93
SLC39A13-208ENST00000528979 PRDM2Q13029 1718 aa27.09■■□□□ 1.93
SLC39A13-208ENST00000528979 FBLN2P98095 1184 aa27.05■■□□□ 1.92
SLC39A13-208ENST00000528979 EIF4G3O43432 1585 aaKnown RBP27.04■■□□□ 1.92
SLC39A13-208ENST00000528979 AQRO60306 1485 aaKnown RBP eCLIP27.02■■□□□ 1.922e-6■■■□□ 18.3
SLC39A13-208ENST00000528979 ABCC8Q09428 1581 aa26.98■■□□□ 1.91
SLC39A13-208ENST00000528979 ARAP1Q96P48 1450 aa26.95■■□□□ 1.91
SLC39A13-208ENST00000528979 DNMBPQ6XZF7 1577 aa26.93■■□□□ 1.9
SLC39A13-208ENST00000528979 CHD1O14646 1710 aa26.92■■□□□ 1.9
SLC39A13-208ENST00000528979 TARBP1Q13395 1621 aaKnown RBP26.88■■□□□ 1.89
SLC39A13-208ENST00000528979 POLA1P09884 1462 aaPredicted RBP26.82■■□□□ 1.88
SLC39A13-208ENST00000528979 TDRD9Q8NDG6 1382 aaKnown RBP26.8■■□□□ 1.88
SLC39A13-208ENST00000528979 RAD54L2Q9Y4B4 1467 aa26.8■■□□□ 1.88
SLC39A13-208ENST00000528979 SOGA1O94964 1423 aa26.74■■□□□ 1.87
SLC39A13-208ENST00000528979 CHMP7Q8WUX9 453 aaPredicted RBP26.71■■□□□ 1.87
SLC39A13-208ENST00000528979 AEBP2Q6ZN18 517 aaPredicted RBP26.7■■□□□ 1.86
SLC39A13-208ENST00000528979 SNAPC4Q5SXM2 1469 aa26.68■■□□□ 1.86
SLC39A13-208ENST00000528979 CLASP1Q7Z460 1538 aa26.61■■□□□ 1.85
SLC39A13-208ENST00000528979 FGD5Q6ZNL6 1462 aa26.59■■□□□ 1.85
SLC39A13-208ENST00000528979 SYNJ1O43426 1573 aa26.56■■□□□ 1.84
SLC39A13-208ENST00000528979 MAGI1Q96QZ7 1491 aaPredicted RBP26.53■■□□□ 1.84
SLC39A13-208ENST00000528979 GRIN2BQ13224 1484 aa26.52■■□□□ 1.84
SLC39A13-208ENST00000528979 SYNJ2O15056 1496 aa26.48■■□□□ 1.83
SLC39A13-208ENST00000528979 WDR97A6NE52 1622 aa26.47■■□□□ 1.83
SLC39A13-208ENST00000528979 CUX1P39880 1505 aa26.47■■□□□ 1.83
SLC39A13-208ENST00000528979 GAPVD1Q14C86 1478 aa26.44■■□□□ 1.82
SLC39A13-208ENST00000528979 PBRM1Q86U86 1689 aa26.29■■□□□ 1.8
SLC39A13-208ENST00000528979 ERCC6L2Q5T890 1561 aa26.24■■□□□ 1.79
SLC39A13-208ENST00000528979 ABCA10Q8WWZ4 1543 aa26.21■■□□□ 1.79
SLC39A13-208ENST00000528979 ABCA5Q8WWZ7 1642 aa26.18■■□□□ 1.78
SLC39A13-208ENST00000528979 GRIN2AQ12879 1464 aa26.17■■□□□ 1.78
SLC39A13-208ENST00000528979 CEP170Q5SW79 1584 aa26.11■■□□□ 1.77
SLC39A13-208ENST00000528979 NUP160Q12769 1436 aa26.08■■□□□ 1.77
SLC39A13-208ENST00000528979 WRNQ14191 1432 aaPredicted RBP eCLIP26.06■■□□□ 1.76
SLC39A13-208ENST00000528979 ADAMTS12P58397 1594 aa26.04■■□□□ 1.76
SLC39A13-208ENST00000528979 FHAD1B1AJZ9 1412 aa26■■□□□ 1.75
SLC39A13-208ENST00000528979 SUPT5HO00267 1087 aaKnown RBP25.97■■□□□ 1.75
SLC39A13-208ENST00000528979 SHROOM2Q13796 1616 aa25.96■■□□□ 1.75
SLC39A13-208ENST00000528979 PRG4Q92954 1404 aaPredicted RBP25.96■■□□□ 1.75
SLC39A13-208ENST00000528979 JPH4Q96JJ6 628 aa25.93■■□□□ 1.74
SLC39A13-208ENST00000528979 FAM69CQ0P6D2 419 aa25.92■■□□□ 1.74
SLC39A13-208ENST00000528979 KIF13AQ9H1H9 1805 aa25.91■■□□□ 1.74
SLC39A13-208ENST00000528979 NPM1P06748 294 aaKnown RBP eCLIP25.87■■□□□ 1.73
SLC39A13-208ENST00000528979 ERICH3Q5RHP9 1530 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 197.4 ms