RNA–Protein interactions for RNA: ENST00000528953.1

AP002008.2-203, humanhuman

TSL 1 (best)

Gene AP002008.2, Length 707 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.2-203ENST00000528953 NISCHQ9Y2I1 1504 aa43.58■■■■■ 4.57
AP002008.2-203ENST00000528953 CCDC180Q9P1Z9 1646 aa38.96■■■■□ 3.83
AP002008.2-203ENST00000528953 ABCC9O60706 1549 aa38.79■■■■□ 3.8
AP002008.2-203ENST00000528953 RB1CC1Q8TDY2 1594 aa37.01■■■■□ 3.52
AP002008.2-203ENST00000528953 NACADO15069 1562 aa36.83■■■■□ 3.49
AP002008.2-203ENST00000528953 DCAF8L2P0C7V8 631 aa36.71■■■■□ 3.47
AP002008.2-203ENST00000528953 MYO15BQ96JP2 1530 aa36.42■■■■□ 3.42
AP002008.2-203ENST00000528953 DNAJC5BQ9UF47 199 aa36.19■■■■□ 3.38
AP002008.2-203ENST00000528953 ZCCHC6Q5VYS8 1495 aaKnown RBP36.18■■■■□ 3.38
AP002008.2-203ENST00000528953 PABPN1Q86U42 306 aaKnown RBP eCLIP36.17■■■■□ 3.38
AP002008.2-203ENST00000528953 UNC13AQ9UPW8 1703 aa36.06■■■■□ 3.36
AP002008.2-203ENST00000528953 DCAF1Q9Y4B6 1507 aa36.03■■■■□ 3.36
AP002008.2-203ENST00000528953 BICRAQ9NZM4 1560 aa35.9■■■■□ 3.34
AP002008.2-203ENST00000528953 SCRIBQ14160 1630 aa35.54■■■■□ 3.28
AP002008.2-203ENST00000528953 SHROOM4Q9ULL8 1493 aa35.51■■■■□ 3.28
AP002008.2-203ENST00000528953 EIF4G1Q04637 1599 aaKnown RBP35.03■■■■□ 3.2
AP002008.2-203ENST00000528953 CC2D2AQ9P2K1 1620 aa35.03■■■■□ 3.2
AP002008.2-203ENST00000528953 CECR2Q9BXF3 1484 aa34.94■■■■□ 3.18
AP002008.2-203ENST00000528953 NCAPD3P42695 1498 aa34.02■■■■□ 3.04
AP002008.2-203ENST00000528953 ATAD2BQ9ULI0 1458 aa33.95■■■■□ 3.02
AP002008.2-203ENST00000528953 SMARCA4P51532 1647 aa33.92■■■■□ 3.02
AP002008.2-203ENST00000528953 SMARCA2P51531 1590 aa33.85■■■■□ 3.01
AP002008.2-203ENST00000528953 BAZ1AQ9NRL2 1556 aaPredicted RBP33.82■■■■□ 3
AP002008.2-203ENST00000528953 HMGXB3Q12766 1538 aa33.77■■■■□ 3
AP002008.2-203ENST00000528953 BAZ1BQ9UIG0 1483 aaKnown RBP33.63■■■□□ 2.97
AP002008.2-203ENST00000528953 PEG3Q9GZU2 1588 aa33.61■■■□□ 2.97
AP002008.2-203ENST00000528953 MROH2BQ7Z745 1585 aa33.57■■■□□ 2.96
AP002008.2-203ENST00000528953 ERCC6Q03468 1493 aa33.5■■■□□ 2.95
AP002008.2-203ENST00000528953 NESP48681 1621 aa33.38■■■□□ 2.93
AP002008.2-203ENST00000528953 CUX2O14529 1486 aa33.37■■■□□ 2.93
AP002008.2-203ENST00000528953 LAMC3Q9Y6N6 1575 aa33.18■■■□□ 2.9
AP002008.2-203ENST00000528953 WIZO95785 1651 aa33.14■■■□□ 2.9
AP002008.2-203ENST00000528953 DNAJC5Q9H3Z4 198 aa33.1■■■□□ 2.89
AP002008.2-203ENST00000528953 PDS5BQ9NTI5 1447 aa33.03■■■□□ 2.88
AP002008.2-203ENST00000528953 CADPSQ9ULU8 1353 aa33.01■■■□□ 2.88
AP002008.2-203ENST00000528953 RSF1Q96T23 1441 aaPredicted RBP32.99■■■□□ 2.87
AP002008.2-203ENST00000528953 THOC2Q8NI27 1593 aaKnown RBP32.97■■■□□ 2.87
AP002008.2-203ENST00000528953 KIF21AQ7Z4S6 1674 aa32.89■■■□□ 2.86
AP002008.2-203ENST00000528953 TOP2AP11388 1531 aaKnown RBP32.79■■■□□ 2.84
AP002008.2-203ENST00000528953 MRC2Q9UBG0 1479 aa32.72■■■□□ 2.83
AP002008.2-203ENST00000528953 CFTRP13569 1480 aa32.67■■■□□ 2.82
AP002008.2-203ENST00000528953 CEP164Q9UPV0 1460 aa32.62■■■□□ 2.81
AP002008.2-203ENST00000528953 FANCD2Q9BXW9 1451 aa32.61■■■□□ 2.81
AP002008.2-203ENST00000528953 WDR62O43379 1518 aa32.61■■■□□ 2.81
AP002008.2-203ENST00000528953 CCDC88BA6NC98 1476 aa32.42■■■□□ 2.78
AP002008.2-203ENST00000528953 URB2Q14146 1524 aaKnown RBP32.31■■■□□ 2.76
AP002008.2-203ENST00000528953 PRDM2Q13029 1718 aa32.23■■■□□ 2.75
AP002008.2-203ENST00000528953 TOPBP1Q92547 1522 aa32.01■■■□□ 2.72
AP002008.2-203ENST00000528953 IFT140Q96RY7 1462 aa31.97■■■□□ 2.71
AP002008.2-203ENST00000528953 ABCC8Q09428 1581 aa31.97■■■□□ 2.71
AP002008.2-203ENST00000528953 DNMBPQ6XZF7 1577 aa31.9■■■□□ 2.7
AP002008.2-203ENST00000528953 OSCARQ8IYS5 282 aa31.89■■■□□ 2.7
AP002008.2-203ENST00000528953 ZNF608Q9ULD9 1512 aaPredicted RBP31.88■■■□□ 2.69
AP002008.2-203ENST00000528953 TRIM41Q8WV44 630 aa31.73■■■□□ 2.67
AP002008.2-203ENST00000528953 POLA1P09884 1462 aaPredicted RBP31.71■■■□□ 2.67
AP002008.2-203ENST00000528953 SUPT5HO00267 1087 aaKnown RBP31.7■■■□□ 2.67
AP002008.2-203ENST00000528953 EIF4G3O43432 1585 aaKnown RBP31.68■■■□□ 2.66
AP002008.2-203ENST00000528953 TARBP1Q13395 1621 aaKnown RBP31.67■■■□□ 2.66
AP002008.2-203ENST00000528953 AQRO60306 1485 aaKnown RBP eCLIP31.63■■■□□ 2.65
AP002008.2-203ENST00000528953 RAD54L2Q9Y4B4 1467 aa31.59■■■□□ 2.65
AP002008.2-203ENST00000528953 SOGA1O94964 1423 aa31.58■■■□□ 2.65
AP002008.2-203ENST00000528953 CUX1P39880 1505 aa31.54■■■□□ 2.64
AP002008.2-203ENST00000528953 FGD5Q6ZNL6 1462 aa31.53■■■□□ 2.64
AP002008.2-203ENST00000528953 TDRD9Q8NDG6 1382 aaKnown RBP31.49■■■□□ 2.63
AP002008.2-203ENST00000528953 WDR97A6NE52 1622 aa31.4■■■□□ 2.62
AP002008.2-203ENST00000528953 FBLN2P98095 1184 aa31.4■■■□□ 2.62
AP002008.2-203ENST00000528953 RIMBP3CA6NJZ7 1639 aa31.38■■■□□ 2.61
AP002008.2-203ENST00000528953 RIMBP3BA6NNM3 1639 aa31.38■■■□□ 2.61
AP002008.2-203ENST00000528953 RIMBP3Q9UFD9 1639 aa31.38■■■□□ 2.61
AP002008.2-203ENST00000528953 CHD1O14646 1710 aa31.36■■■□□ 2.61
AP002008.2-203ENST00000528953 ARHGEF11O15085 1522 aa31.35■■■□□ 2.61
AP002008.2-203ENST00000528953 SNAPC4Q5SXM2 1469 aa31.32■■■□□ 2.6
AP002008.2-203ENST00000528953 GRIN2BQ13224 1484 aa31.28■■■□□ 2.6
AP002008.2-203ENST00000528953 MAGI1Q96QZ7 1491 aaPredicted RBP31.25■■■□□ 2.59
AP002008.2-203ENST00000528953 CHMP7Q8WUX9 453 aaPredicted RBP31.21■■■□□ 2.59
AP002008.2-203ENST00000528953 ABCA10Q8WWZ4 1543 aa31.2■■■□□ 2.59
AP002008.2-203ENST00000528953 GAPVD1Q14C86 1478 aa31.19■■■□□ 2.58
AP002008.2-203ENST00000528953 WRNQ14191 1432 aaPredicted RBP eCLIP31.15■■■□□ 2.58
AP002008.2-203ENST00000528953 SYNJ2O15056 1496 aa31.14■■■□□ 2.58
AP002008.2-203ENST00000528953 CYB5RLQ6IPT4 315 aa31.12■■■□□ 2.57
AP002008.2-203ENST00000528953 ABCA5Q8WWZ7 1642 aa31.09■■■□□ 2.57
AP002008.2-203ENST00000528953 SYNJ1O43426 1573 aa31.09■■■□□ 2.57
AP002008.2-203ENST00000528953 PBRM1Q86U86 1689 aa31.08■■■□□ 2.57
AP002008.2-203ENST00000528953 TOP2BQ02880 1626 aa31.08■■■□□ 2.57
AP002008.2-203ENST00000528953 CLASP1Q7Z460 1538 aa31.08■■■□□ 2.57
AP002008.2-203ENST00000528953 ARAP1Q96P48 1450 aa31.06■■■□□ 2.56
AP002008.2-203ENST00000528953 BIVM-ERCC5R4GMW8 1640 aa31.05■■■□□ 2.56
AP002008.2-203ENST00000528953 GRIN2AQ12879 1464 aa30.87■■■□□ 2.53
AP002008.2-203ENST00000528953 ADAMTS12P58397 1594 aa30.85■■■□□ 2.53
AP002008.2-203ENST00000528953 FHAD1B1AJZ9 1412 aa30.81■■■□□ 2.52
AP002008.2-203ENST00000528953 ERICH3Q5RHP9 1530 aa30.81■■■□□ 2.52
AP002008.2-203ENST00000528953 NUP160Q12769 1436 aa30.77■■■□□ 2.52
AP002008.2-203ENST00000528953 CEP170Q5SW79 1584 aa30.71■■■□□ 2.51
AP002008.2-203ENST00000528953 TRHP20396 242 aaPredicted RBP30.71■■■□□ 2.51
AP002008.2-203ENST00000528953 ERCC6L2Q5T890 1561 aa30.59■■■□□ 2.49
AP002008.2-203ENST00000528953 SHROOM2Q13796 1616 aa30.55■■■□□ 2.48
AP002008.2-203ENST00000528953 KIF27Q86VH2 1401 aa30.53■■■□□ 2.48
AP002008.2-203ENST00000528953 IGF1RP08069 1367 aa30.5■■■□□ 2.47
AP002008.2-203ENST00000528953 JPH4Q96JJ6 628 aa30.46■■■□□ 2.47
AP002008.2-203ENST00000528953 PRG4Q92954 1404 aaPredicted RBP30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms