RNA–Protein interactions for RNA: ENST00000528942.1

CCDC18-210, Transcript of coiled-coil domain containing 18, humanhuman

TSL 4

Gene CCDC18, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-210ENST00000528942 NISCHQ9Y2I1 1504 aa36.39■■■■□ 3.42
CCDC18-210ENST00000528942 CCDC180Q9P1Z9 1646 aa32.48■■■□□ 2.79
CCDC18-210ENST00000528942 ABCC9O60706 1549 aa31.7■■■□□ 2.66
CCDC18-210ENST00000528942 RB1CC1Q8TDY2 1594 aa30.55■■■□□ 2.48
CCDC18-210ENST00000528942 NACADO15069 1562 aa30.49■■■□□ 2.47
CCDC18-210ENST00000528942 ZCCHC6Q5VYS8 1495 aaKnown RBP30.33■■■□□ 2.45
CCDC18-210ENST00000528942 MYO15BQ96JP2 1530 aa30.29■■■□□ 2.44
CCDC18-210ENST00000528942 DCAF8L2P0C7V8 631 aa30.29■■■□□ 2.44
CCDC18-210ENST00000528942 DCAF1Q9Y4B6 1507 aa30.14■■■□□ 2.42
CCDC18-210ENST00000528942 UNC13AQ9UPW8 1703 aa29.88■■■□□ 2.37
CCDC18-210ENST00000528942 BICRAQ9NZM4 1560 aa29.59■■■□□ 2.33
CCDC18-210ENST00000528942 SCRIBQ14160 1630 aa29.58■■■□□ 2.33
CCDC18-210ENST00000528942 PABPN1Q86U42 306 aaKnown RBP eCLIP29.53■■■□□ 2.32
CCDC18-210ENST00000528942 SHROOM4Q9ULL8 1493 aa29.36■■■□□ 2.29
CCDC18-210ENST00000528942 DNAJC5BQ9UF47 199 aa29.01■■■□□ 2.23
CCDC18-210ENST00000528942 EIF4G1Q04637 1599 aaKnown RBP28.83■■■□□ 2.21
CCDC18-210ENST00000528942 CC2D2AQ9P2K1 1620 aa28.72■■■□□ 2.19
CCDC18-210ENST00000528942 CECR2Q9BXF3 1484 aa28.51■■■□□ 2.15
CCDC18-210ENST00000528942 SMARCA4P51532 1647 aa28.29■■■□□ 2.12
CCDC18-210ENST00000528942 BAZ1AQ9NRL2 1556 aaPredicted RBP28.24■■■□□ 2.11
CCDC18-210ENST00000528942 SMARCA2P51531 1590 aa28.11■■■□□ 2.09
CCDC18-210ENST00000528942 ATAD2BQ9ULI0 1458 aa28.08■■■□□ 2.09
CCDC18-210ENST00000528942 NCAPD3P42695 1498 aa28.08■■■□□ 2.09
CCDC18-210ENST00000528942 MROH2BQ7Z745 1585 aa28.03■■■□□ 2.08
CCDC18-210ENST00000528942 PEG3Q9GZU2 1588 aa28.02■■■□□ 2.08
CCDC18-210ENST00000528942 HMGXB3Q12766 1538 aa28.02■■■□□ 2.08
CCDC18-210ENST00000528942 BAZ1BQ9UIG0 1483 aaKnown RBP27.89■■■□□ 2.06
CCDC18-210ENST00000528942 WIZO95785 1651 aa27.75■■■□□ 2.03
CCDC18-210ENST00000528942 RSF1Q96T23 1441 aaPredicted RBP27.67■■■□□ 2.02
CCDC18-210ENST00000528942 TOP2AP11388 1531 aaKnown RBP27.48■■□□□ 1.99
CCDC18-210ENST00000528942 NESP48681 1621 aa27.41■■□□□ 1.98
CCDC18-210ENST00000528942 LAMC3Q9Y6N6 1575 aa27.41■■□□□ 1.98
CCDC18-210ENST00000528942 ERCC6Q03468 1493 aa27.38■■□□□ 1.97
CCDC18-210ENST00000528942 CADPSQ9ULU8 1353 aa27.23■■□□□ 1.95
CCDC18-210ENST00000528942 PDS5BQ9NTI5 1447 aa27.18■■□□□ 1.94
CCDC18-210ENST00000528942 KIF21AQ7Z4S6 1674 aa27.17■■□□□ 1.94
CCDC18-210ENST00000528942 CUX2O14529 1486 aa27.11■■□□□ 1.93
CCDC18-210ENST00000528942 CFTRP13569 1480 aa27.1■■□□□ 1.93
CCDC18-210ENST00000528942 THOC2Q8NI27 1593 aaKnown RBP27.09■■□□□ 1.93
CCDC18-210ENST00000528942 CCDC88BA6NC98 1476 aa27.09■■□□□ 1.93
CCDC18-210ENST00000528942 PRDM2Q13029 1718 aa27.02■■□□□ 1.92
CCDC18-210ENST00000528942 FANCD2Q9BXW9 1451 aa26.97■■□□□ 1.91
CCDC18-210ENST00000528942 CEP164Q9UPV0 1460 aa26.97■■□□□ 1.91
CCDC18-210ENST00000528942 MRC2Q9UBG0 1479 aa26.93■■□□□ 1.9
CCDC18-210ENST00000528942 WDR62O43379 1518 aa26.86■■□□□ 1.89
CCDC18-210ENST00000528942 SUPT5HO00267 1087 aaKnown RBP26.86■■□□□ 1.89
CCDC18-210ENST00000528942 URB2Q14146 1524 aaKnown RBP26.7■■□□□ 1.86
CCDC18-210ENST00000528942 ABCC8Q09428 1581 aa26.54■■□□□ 1.84
CCDC18-210ENST00000528942 DNMBPQ6XZF7 1577 aa26.54■■□□□ 1.84
CCDC18-210ENST00000528942 TOPBP1Q92547 1522 aa26.53■■□□□ 1.84
CCDC18-210ENST00000528942 IFT140Q96RY7 1462 aa26.38■■□□□ 1.81
CCDC18-210ENST00000528942 CUX1P39880 1505 aa26.32■■□□□ 1.8
CCDC18-210ENST00000528942 POLA1P09884 1462 aaPredicted RBP26.3■■□□□ 1.8
CCDC18-210ENST00000528942 TARBP1Q13395 1621 aaKnown RBP26.28■■□□□ 1.8
CCDC18-210ENST00000528942 ZNF608Q9ULD9 1512 aaPredicted RBP26.24■■□□□ 1.79
CCDC18-210ENST00000528942 FGD5Q6ZNL6 1462 aa26.23■■□□□ 1.79
CCDC18-210ENST00000528942 EIF4G3O43432 1585 aaKnown RBP26.22■■□□□ 1.79
CCDC18-210ENST00000528942 DNAJC5Q9H3Z4 198 aa26.2■■□□□ 1.78
CCDC18-210ENST00000528942 RAD54L2Q9Y4B4 1467 aa26.15■■□□□ 1.78
CCDC18-210ENST00000528942 SOGA1O94964 1423 aa26.14■■□□□ 1.78
CCDC18-210ENST00000528942 BIVM-ERCC5R4GMW8 1640 aa26.13■■□□□ 1.77
CCDC18-210ENST00000528942 WDR97A6NE52 1622 aa26.12■■□□□ 1.77
CCDC18-210ENST00000528942 TOP2BQ02880 1626 aa26.12■■□□□ 1.77
CCDC18-210ENST00000528942 WRNQ14191 1432 aaPredicted RBP eCLIP26.12■■□□□ 1.77
CCDC18-210ENST00000528942 SYNJ1O43426 1573 aa26.09■■□□□ 1.77
CCDC18-210ENST00000528942 AQRO60306 1485 aaKnown RBP eCLIP26.06■■□□□ 1.76
CCDC18-210ENST00000528942 TDRD9Q8NDG6 1382 aaKnown RBP25.99■■□□□ 1.75
CCDC18-210ENST00000528942 ABCA10Q8WWZ4 1543 aa25.98■■□□□ 1.75
CCDC18-210ENST00000528942 ABCA5Q8WWZ7 1642 aa25.94■■□□□ 1.74
CCDC18-210ENST00000528942 PBRM1Q86U86 1689 aa25.92■■□□□ 1.74
CCDC18-210ENST00000528942 CHD1O14646 1710 aa25.9■■□□□ 1.74
CCDC18-210ENST00000528942 GRIN2BQ13224 1484 aa25.9■■□□□ 1.74
CCDC18-210ENST00000528942 GAPVD1Q14C86 1478 aa25.88■■□□□ 1.73
CCDC18-210ENST00000528942 SNAPC4Q5SXM2 1469 aa25.87■■□□□ 1.73
CCDC18-210ENST00000528942 OSCARQ8IYS5 282 aa25.87■■□□□ 1.73
CCDC18-210ENST00000528942 MAGI1Q96QZ7 1491 aaPredicted RBP25.86■■□□□ 1.73
CCDC18-210ENST00000528942 SYNJ2O15056 1496 aa25.75■■□□□ 1.71
CCDC18-210ENST00000528942 FBLN2P98095 1184 aa25.73■■□□□ 1.71
CCDC18-210ENST00000528942 ADAMTS12P58397 1594 aa25.69■■□□□ 1.7
CCDC18-210ENST00000528942 ERICH3Q5RHP9 1530 aa25.69■■□□□ 1.7
CCDC18-210ENST00000528942 CHMP7Q8WUX9 453 aaPredicted RBP25.66■■□□□ 1.7
CCDC18-210ENST00000528942 CLASP1Q7Z460 1538 aa25.59■■□□□ 1.69
CCDC18-210ENST00000528942 FHAD1B1AJZ9 1412 aa25.58■■□□□ 1.69
CCDC18-210ENST00000528942 KIF27Q86VH2 1401 aa25.58■■□□□ 1.69
CCDC18-210ENST00000528942 GRIN2AQ12879 1464 aa25.58■■□□□ 1.69
CCDC18-210ENST00000528942 RIMBP3CA6NJZ7 1639 aa25.57■■□□□ 1.68
CCDC18-210ENST00000528942 RIMBP3BA6NNM3 1639 aa25.57■■□□□ 1.68
CCDC18-210ENST00000528942 RIMBP3Q9UFD9 1639 aa25.57■■□□□ 1.68
CCDC18-210ENST00000528942 ARHGEF11O15085 1522 aa25.54■■□□□ 1.68
CCDC18-210ENST00000528942 CUL7Q14999 1698 aa25.5■■□□□ 1.67
CCDC18-210ENST00000528942 CEP170Q5SW79 1584 aa25.47■■□□□ 1.67
CCDC18-210ENST00000528942 NUP160Q12769 1436 aa25.45■■□□□ 1.66
CCDC18-210ENST00000528942 IGF1RP08069 1367 aa25.42■■□□□ 1.66
CCDC18-210ENST00000528942 TRIM41Q8WV44 630 aa25.39■■□□□ 1.66
CCDC18-210ENST00000528942 RUSC2Q8N2Y8 1516 aa25.33■■□□□ 1.65
CCDC18-210ENST00000528942 SHROOM2Q13796 1616 aa25.32■■□□□ 1.64
CCDC18-210ENST00000528942 ARAP1Q96P48 1450 aa25.32■■□□□ 1.64
CCDC18-210ENST00000528942 CARMIL1Q5VZK9 1371 aa25.28■■□□□ 1.64
CCDC18-210ENST00000528942 CYB5RLQ6IPT4 315 aa25.2■■□□□ 1.62
CCDC18-210ENST00000528942 ERCC6L2Q5T890 1561 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms