RNA–Protein interactions for RNA: ENST00000528935.1

PACS1-207, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-207ENST00000528935 NISCHQ9Y2I1 1504 aa35.88■■■■□ 3.33
PACS1-207ENST00000528935 CCDC180Q9P1Z9 1646 aa32.02■■■□□ 2.72
PACS1-207ENST00000528935 ABCC9O60706 1549 aa31.71■■■□□ 2.67
PACS1-207ENST00000528935 RB1CC1Q8TDY2 1594 aa30.34■■■□□ 2.45
PACS1-207ENST00000528935 NACADO15069 1562 aa30.23■■■□□ 2.43
PACS1-207ENST00000528935 DCAF8L2P0C7V8 631 aa30.17■■■□□ 2.42
PACS1-207ENST00000528935 MYO15BQ96JP2 1530 aa29.94■■■□□ 2.38
PACS1-207ENST00000528935 ZCCHC6Q5VYS8 1495 aaKnown RBP29.79■■■□□ 2.36
PACS1-207ENST00000528935 DCAF1Q9Y4B6 1507 aa29.66■■■□□ 2.34
PACS1-207ENST00000528935 PABPN1Q86U42 306 aaKnown RBP eCLIP29.61■■■□□ 2.33
PACS1-207ENST00000528935 UNC13AQ9UPW8 1703 aa29.59■■■□□ 2.33
PACS1-207ENST00000528935 DNAJC5BQ9UF47 199 aa29.49■■■□□ 2.31
PACS1-207ENST00000528935 BICRAQ9NZM4 1560 aa29.43■■■□□ 2.3
PACS1-207ENST00000528935 SCRIBQ14160 1630 aa29.19■■■□□ 2.26
PACS1-207ENST00000528935 SHROOM4Q9ULL8 1493 aa29.1■■■□□ 2.25
PACS1-207ENST00000528935 EIF4G1Q04637 1599 aaKnown RBP28.68■■■□□ 2.18
PACS1-207ENST00000528935 CC2D2AQ9P2K1 1620 aa28.65■■■□□ 2.18
PACS1-207ENST00000528935 CECR2Q9BXF3 1484 aa28.55■■■□□ 2.16
PACS1-207ENST00000528935 NCAPD3P42695 1498 aa27.92■■■□□ 2.06
PACS1-207ENST00000528935 SMARCA4P51532 1647 aa27.89■■■□□ 2.06
PACS1-207ENST00000528935 ATAD2BQ9ULI0 1458 aa27.86■■■□□ 2.05
PACS1-207ENST00000528935 BAZ1AQ9NRL2 1556 aaPredicted RBP27.82■■■□□ 2.04
PACS1-207ENST00000528935 SMARCA2P51531 1590 aa27.8■■■□□ 2.04
PACS1-207ENST00000528935 HMGXB3Q12766 1538 aa27.71■■■□□ 2.03
PACS1-207ENST00000528935 MROH2BQ7Z745 1585 aa27.64■■■□□ 2.01
PACS1-207ENST00000528935 PEG3Q9GZU2 1588 aa27.64■■■□□ 2.01
PACS1-207ENST00000528935 BAZ1BQ9UIG0 1483 aaKnown RBP27.61■■■□□ 2.01
PACS1-207ENST00000528935 ERCC6Q03468 1493 aa27.37■■□□□ 1.97
PACS1-207ENST00000528935 NESP48681 1621 aa27.34■■□□□ 1.97
PACS1-207ENST00000528935 WIZO95785 1651 aa27.3■■□□□ 1.96
PACS1-207ENST00000528935 CUX2O14529 1486 aa27.21■■□□□ 1.95
PACS1-207ENST00000528935 RSF1Q96T23 1441 aaPredicted RBP27.21■■□□□ 1.95
PACS1-207ENST00000528935 LAMC3Q9Y6N6 1575 aa27.21■■□□□ 1.95
PACS1-207ENST00000528935 CADPSQ9ULU8 1353 aa27.09■■□□□ 1.93
PACS1-207ENST00000528935 PDS5BQ9NTI5 1447 aa27.07■■□□□ 1.92
PACS1-207ENST00000528935 TOP2AP11388 1531 aaKnown RBP27■■□□□ 1.91
PACS1-207ENST00000528935 THOC2Q8NI27 1593 aaKnown RBP26.97■■□□□ 1.91
PACS1-207ENST00000528935 KIF21AQ7Z4S6 1674 aa26.95■■□□□ 1.91
PACS1-207ENST00000528935 DNAJC5Q9H3Z4 198 aa26.86■■□□□ 1.89
PACS1-207ENST00000528935 CFTRP13569 1480 aa26.84■■□□□ 1.89
PACS1-207ENST00000528935 MRC2Q9UBG0 1479 aa26.8■■□□□ 1.88
PACS1-207ENST00000528935 FANCD2Q9BXW9 1451 aa26.75■■□□□ 1.87
PACS1-207ENST00000528935 CEP164Q9UPV0 1460 aa26.74■■□□□ 1.87
PACS1-207ENST00000528935 CCDC88BA6NC98 1476 aa26.71■■□□□ 1.87
PACS1-207ENST00000528935 WDR62O43379 1518 aa26.7■■□□□ 1.87
PACS1-207ENST00000528935 PRDM2Q13029 1718 aa26.52■■□□□ 1.84
PACS1-207ENST00000528935 URB2Q14146 1524 aaKnown RBP26.5■■□□□ 1.83
PACS1-207ENST00000528935 TOPBP1Q92547 1522 aa26.29■■□□□ 1.8
PACS1-207ENST00000528935 ABCC8Q09428 1581 aa26.28■■□□□ 1.8
PACS1-207ENST00000528935 SUPT5HO00267 1087 aaKnown RBP26.26■■□□□ 1.79
PACS1-207ENST00000528935 IFT140Q96RY7 1462 aa26.22■■□□□ 1.79
PACS1-207ENST00000528935 DNMBPQ6XZF7 1577 aa26.21■■□□□ 1.79
PACS1-207ENST00000528935 ZNF608Q9ULD9 1512 aaPredicted RBP26.12■■□□□ 1.77
PACS1-207ENST00000528935 OSCARQ8IYS5 282 aa26.07■■□□□ 1.76
PACS1-207ENST00000528935 POLA1P09884 1462 aaPredicted RBP26.04■■□□□ 1.76
PACS1-207ENST00000528935 TARBP1Q13395 1621 aaKnown RBP26.01■■□□□ 1.75
PACS1-207ENST00000528935 EIF4G3O43432 1585 aaKnown RBP25.97■■□□□ 1.75
PACS1-207ENST00000528935 SOGA1O94964 1423 aa25.96■■□□□ 1.75
PACS1-207ENST00000528935 AQRO60306 1485 aaKnown RBP eCLIP25.95■■□□□ 1.74
PACS1-207ENST00000528935 CUX1P39880 1505 aa25.94■■□□□ 1.74
PACS1-207ENST00000528935 RAD54L2Q9Y4B4 1467 aa25.93■■□□□ 1.74
PACS1-207ENST00000528935 FGD5Q6ZNL6 1462 aa25.91■■□□□ 1.74
PACS1-207ENST00000528935 TDRD9Q8NDG6 1382 aaKnown RBP25.85■■□□□ 1.73
PACS1-207ENST00000528935 TRIM41Q8WV44 630 aa25.79■■□□□ 1.72
PACS1-207ENST00000528935 WDR97A6NE52 1622 aa25.78■■□□□ 1.72
PACS1-207ENST00000528935 FBLN2P98095 1184 aa25.73■■□□□ 1.71
PACS1-207ENST00000528935 CHD1O14646 1710 aa25.7■■□□□ 1.7
PACS1-207ENST00000528935 GRIN2BQ13224 1484 aa25.67■■□□□ 1.7
PACS1-207ENST00000528935 SNAPC4Q5SXM2 1469 aa25.67■■□□□ 1.7
PACS1-207ENST00000528935 WRNQ14191 1432 aaPredicted RBP eCLIP25.66■■□□□ 1.7
PACS1-207ENST00000528935 ABCA10Q8WWZ4 1543 aa25.66■■□□□ 1.7
PACS1-207ENST00000528935 MAGI1Q96QZ7 1491 aaPredicted RBP25.64■■□□□ 1.69
PACS1-207ENST00000528935 GAPVD1Q14C86 1478 aa25.63■■□□□ 1.69
PACS1-207ENST00000528935 RIMBP3CA6NJZ7 1639 aa25.62■■□□□ 1.69
PACS1-207ENST00000528935 RIMBP3BA6NNM3 1639 aa25.62■■□□□ 1.69
PACS1-207ENST00000528935 TOP2BQ02880 1626 aa25.62■■□□□ 1.69
PACS1-207ENST00000528935 RIMBP3Q9UFD9 1639 aa25.62■■□□□ 1.69
PACS1-207ENST00000528935 CHMP7Q8WUX9 453 aaPredicted RBP25.61■■□□□ 1.69
PACS1-207ENST00000528935 BIVM-ERCC5R4GMW8 1640 aa25.6■■□□□ 1.69
PACS1-207ENST00000528935 ARHGEF11O15085 1522 aa25.59■■□□□ 1.69
PACS1-207ENST00000528935 SYNJ1O43426 1573 aa25.58■■□□□ 1.69
PACS1-207ENST00000528935 ABCA5Q8WWZ7 1642 aa25.55■■□□□ 1.68
PACS1-207ENST00000528935 SYNJ2O15056 1496 aa25.55■■□□□ 1.68
PACS1-207ENST00000528935 PBRM1Q86U86 1689 aa25.54■■□□□ 1.68
PACS1-207ENST00000528935 CLASP1Q7Z460 1538 aa25.45■■□□□ 1.66
PACS1-207ENST00000528935 CYB5RLQ6IPT4 315 aa25.42■■□□□ 1.66
PACS1-207ENST00000528935 ARAP1Q96P48 1450 aa25.36■■□□□ 1.65
PACS1-207ENST00000528935 ADAMTS12P58397 1594 aa25.34■■□□□ 1.65
PACS1-207ENST00000528935 GRIN2AQ12879 1464 aa25.34■■□□□ 1.65
PACS1-207ENST00000528935 ERICH3Q5RHP9 1530 aa25.33■■□□□ 1.65
PACS1-207ENST00000528935 FHAD1B1AJZ9 1412 aa25.32■■□□□ 1.64
PACS1-207ENST00000528935 NUP160Q12769 1436 aa25.25■■□□□ 1.63
PACS1-207ENST00000528935 CEP170Q5SW79 1584 aa25.21■■□□□ 1.63
PACS1-207ENST00000528935 KIF27Q86VH2 1401 aa25.16■■□□□ 1.62
PACS1-207ENST00000528935 IGF1RP08069 1367 aa25.12■■□□□ 1.61
PACS1-207ENST00000528935 SHROOM2Q13796 1616 aa25.07■■□□□ 1.6
PACS1-207ENST00000528935 ERCC6L2Q5T890 1561 aa25.06■■□□□ 1.6
PACS1-207ENST00000528935 TRHP20396 242 aaPredicted RBP25.03■■□□□ 1.6
PACS1-207ENST00000528935 JPH4Q96JJ6 628 aa25.02■■□□□ 1.6
PACS1-207ENST00000528935 CUL7Q14999 1698 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms