RNA–Protein interactions for RNA: ENST00000528890.1

LRP5-203, Transcript of LDL receptor related protein 5, humanhuman

TSL 3

Gene LRP5, Length 464 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP5-203ENST00000528890 NISCHQ9Y2I1 1504 aa48■■■■■ 5.27
LRP5-203ENST00000528890 CCDC180Q9P1Z9 1646 aa42.94■■■■■ 4.46
LRP5-203ENST00000528890 ABCC9O60706 1549 aa42.77■■■■■ 4.44
LRP5-203ENST00000528890 RB1CC1Q8TDY2 1594 aa40.81■■■■■ 4.12
LRP5-203ENST00000528890 NACADO15069 1562 aa40.57■■■■■ 4.09
LRP5-203ENST00000528890 DCAF8L2P0C7V8 631 aa40.55■■■■■ 4.08
LRP5-203ENST00000528890 MYO15BQ96JP2 1530 aa40.06■■■■■ 4
LRP5-203ENST00000528890 PABPN1Q86U42 306 aaKnown RBP eCLIP39.89■■■■□ 3.98
LRP5-203ENST00000528890 DNAJC5BQ9UF47 199 aa39.87■■■■□ 3.97
LRP5-203ENST00000528890 ZCCHC6Q5VYS8 1495 aaKnown RBP39.82■■■■□ 3.97
LRP5-203ENST00000528890 UNC13AQ9UPW8 1703 aa39.81■■■■□ 3.96
LRP5-203ENST00000528890 DCAF1Q9Y4B6 1507 aa39.64■■■■□ 3.94
LRP5-203ENST00000528890 BICRAQ9NZM4 1560 aa39.55■■■■□ 3.92
LRP5-203ENST00000528890 SCRIBQ14160 1630 aa39.19■■■■□ 3.86
LRP5-203ENST00000528890 SHROOM4Q9ULL8 1493 aa39.07■■■■□ 3.85
LRP5-203ENST00000528890 CC2D2AQ9P2K1 1620 aa38.62■■■■□ 3.77
LRP5-203ENST00000528890 EIF4G1Q04637 1599 aaKnown RBP38.6■■■■□ 3.77
LRP5-203ENST00000528890 CECR2Q9BXF3 1484 aa38.51■■■■□ 3.76
LRP5-203ENST00000528890 NCAPD3P42695 1498 aa37.45■■■■□ 3.59
LRP5-203ENST00000528890 SMARCA4P51532 1647 aa37.39■■■■□ 3.58
LRP5-203ENST00000528890 ATAD2BQ9ULI0 1458 aa37.38■■■■□ 3.57
LRP5-203ENST00000528890 SMARCA2P51531 1590 aa37.3■■■■□ 3.56
LRP5-203ENST00000528890 BAZ1AQ9NRL2 1556 aaPredicted RBP37.26■■■■□ 3.56
LRP5-203ENST00000528890 HMGXB3Q12766 1538 aa37.19■■■■□ 3.54
LRP5-203ENST00000528890 BAZ1BQ9UIG0 1483 aaKnown RBP37.06■■■■□ 3.52
LRP5-203ENST00000528890 PEG3Q9GZU2 1588 aa37■■■■□ 3.51
LRP5-203ENST00000528890 MROH2BQ7Z745 1585 aa36.99■■■■□ 3.51
LRP5-203ENST00000528890 ERCC6Q03468 1493 aa36.95■■■■□ 3.51
LRP5-203ENST00000528890 NESP48681 1621 aa36.79■■■■□ 3.48
LRP5-203ENST00000528890 CUX2O14529 1486 aa36.75■■■■□ 3.47
LRP5-203ENST00000528890 LAMC3Q9Y6N6 1575 aa36.57■■■■□ 3.45
LRP5-203ENST00000528890 WIZO95785 1651 aa36.55■■■■□ 3.44
LRP5-203ENST00000528890 DNAJC5Q9H3Z4 198 aa36.47■■■■□ 3.43
LRP5-203ENST00000528890 PDS5BQ9NTI5 1447 aa36.4■■■■□ 3.42
LRP5-203ENST00000528890 CADPSQ9ULU8 1353 aa36.35■■■■□ 3.41
LRP5-203ENST00000528890 THOC2Q8NI27 1593 aaKnown RBP36.34■■■■□ 3.41
LRP5-203ENST00000528890 RSF1Q96T23 1441 aaPredicted RBP36.32■■■■□ 3.4
LRP5-203ENST00000528890 KIF21AQ7Z4S6 1674 aa36.3■■■■□ 3.4
LRP5-203ENST00000528890 TOP2AP11388 1531 aaKnown RBP36.12■■■■□ 3.37
LRP5-203ENST00000528890 MRC2Q9UBG0 1479 aa36.05■■■■□ 3.36
LRP5-203ENST00000528890 CEP164Q9UPV0 1460 aa35.97■■■■□ 3.35
LRP5-203ENST00000528890 CFTRP13569 1480 aa35.96■■■■□ 3.35
LRP5-203ENST00000528890 FANCD2Q9BXW9 1451 aa35.94■■■■□ 3.34
LRP5-203ENST00000528890 WDR62O43379 1518 aa35.92■■■■□ 3.34
LRP5-203ENST00000528890 CCDC88BA6NC98 1476 aa35.72■■■■□ 3.31
LRP5-203ENST00000528890 URB2Q14146 1524 aaKnown RBP35.6■■■■□ 3.29
LRP5-203ENST00000528890 PRDM2Q13029 1718 aa35.59■■■■□ 3.29
LRP5-203ENST00000528890 TOPBP1Q92547 1522 aa35.27■■■■□ 3.24
LRP5-203ENST00000528890 ABCC8Q09428 1581 aa35.24■■■■□ 3.23
LRP5-203ENST00000528890 IFT140Q96RY7 1462 aa35.23■■■■□ 3.23
LRP5-203ENST00000528890 OSCARQ8IYS5 282 aa35.17■■■■□ 3.22
LRP5-203ENST00000528890 DNMBPQ6XZF7 1577 aa35.16■■■■□ 3.22
LRP5-203ENST00000528890 ZNF608Q9ULD9 1512 aaPredicted RBP35.12■■■■□ 3.21
LRP5-203ENST00000528890 TRIM41Q8WV44 630 aa35.05■■■■□ 3.2
LRP5-203ENST00000528890 SUPT5HO00267 1087 aaKnown RBP35■■■■□ 3.19
LRP5-203ENST00000528890 EIF4G3O43432 1585 aaKnown RBP34.94■■■■□ 3.18
LRP5-203ENST00000528890 POLA1P09884 1462 aaPredicted RBP34.92■■■■□ 3.18
LRP5-203ENST00000528890 TARBP1Q13395 1621 aaKnown RBP34.9■■■■□ 3.18
LRP5-203ENST00000528890 AQRO60306 1485 aaKnown RBP eCLIP34.86■■■■□ 3.175e-7■■■■■ 27.6
LRP5-203ENST00000528890 RAD54L2Q9Y4B4 1467 aa34.81■■■■□ 3.16
LRP5-203ENST00000528890 SOGA1O94964 1423 aa34.81■■■■□ 3.16
LRP5-203ENST00000528890 FGD5Q6ZNL6 1462 aa34.75■■■■□ 3.15
LRP5-203ENST00000528890 CUX1P39880 1505 aa34.74■■■■□ 3.15
LRP5-203ENST00000528890 TDRD9Q8NDG6 1382 aaKnown RBP34.71■■■■□ 3.15
LRP5-203ENST00000528890 FBLN2P98095 1184 aa34.67■■■■□ 3.14
LRP5-203ENST00000528890 CHD1O14646 1710 aa34.63■■■■□ 3.13
LRP5-203ENST00000528890 RIMBP3CA6NJZ7 1639 aa34.62■■■■□ 3.13
LRP5-203ENST00000528890 RIMBP3BA6NNM3 1639 aa34.62■■■■□ 3.13
LRP5-203ENST00000528890 RIMBP3Q9UFD9 1639 aa34.62■■■■□ 3.13
LRP5-203ENST00000528890 WDR97A6NE52 1622 aa34.59■■■■□ 3.13
LRP5-203ENST00000528890 ARHGEF11O15085 1522 aa34.55■■■■□ 3.12
LRP5-203ENST00000528890 SNAPC4Q5SXM2 1469 aa34.52■■■■□ 3.12
LRP5-203ENST00000528890 GRIN2BQ13224 1484 aa34.46■■■■□ 3.11
LRP5-203ENST00000528890 CHMP7Q8WUX9 453 aaPredicted RBP34.44■■■■□ 3.1
LRP5-203ENST00000528890 MAGI1Q96QZ7 1491 aaPredicted RBP34.43■■■■□ 3.1
LRP5-203ENST00000528890 GAPVD1Q14C86 1478 aa34.38■■■■□ 3.09
LRP5-203ENST00000528890 ABCA10Q8WWZ4 1543 aa34.36■■■■□ 3.09
LRP5-203ENST00000528890 CYB5RLQ6IPT4 315 aa34.35■■■■□ 3.09
LRP5-203ENST00000528890 SYNJ2O15056 1496 aa34.31■■■■□ 3.08
LRP5-203ENST00000528890 PBRM1Q86U86 1689 aa34.31■■■■□ 3.08
LRP5-203ENST00000528890 WRNQ14191 1432 aaPredicted RBP eCLIP34.3■■■■□ 3.08
LRP5-203ENST00000528890 SYNJ1O43426 1573 aa34.28■■■■□ 3.08
LRP5-203ENST00000528890 ABCA5Q8WWZ7 1642 aa34.26■■■■□ 3.07
LRP5-203ENST00000528890 TOP2BQ02880 1626 aa34.24■■■■□ 3.07
LRP5-203ENST00000528890 BIVM-ERCC5R4GMW8 1640 aa34.23■■■■□ 3.07
LRP5-203ENST00000528890 CLASP1Q7Z460 1538 aa34.23■■■■□ 3.07
LRP5-203ENST00000528890 ARAP1Q96P48 1450 aa34.21■■■■□ 3.07
LRP5-203ENST00000528890 GRIN2AQ12879 1464 aa34.01■■■■□ 3.03
LRP5-203ENST00000528890 ADAMTS12P58397 1594 aa34■■■■□ 3.03
LRP5-203ENST00000528890 FHAD1B1AJZ9 1412 aa33.96■■■■□ 3.03
LRP5-203ENST00000528890 ERICH3Q5RHP9 1530 aa33.94■■■■□ 3.02
LRP5-203ENST00000528890 TRHP20396 242 aaPredicted RBP33.93■■■■□ 3.02
LRP5-203ENST00000528890 NUP160Q12769 1436 aa33.87■■■■□ 3.01
LRP5-203ENST00000528890 CEP170Q5SW79 1584 aa33.85■■■■□ 3.01
LRP5-203ENST00000528890 ERCC6L2Q5T890 1561 aa33.72■■■□□ 2.99
LRP5-203ENST00000528890 SHROOM2Q13796 1616 aa33.66■■■□□ 2.98
LRP5-203ENST00000528890 KIF27Q86VH2 1401 aa33.64■■■□□ 2.98
LRP5-203ENST00000528890 JPH4Q96JJ6 628 aa33.58■■■□□ 2.97
LRP5-203ENST00000528890 IGF1RP08069 1367 aa33.57■■■□□ 2.96
LRP5-203ENST00000528890 PRG4Q92954 1404 aaPredicted RBP33.56■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms