RNA–Protein interactions for RNA: ENST00000528854.1

FRMD8-206, Transcript of FERM domain containing 8, humanhuman

TSL 2

Gene FRMD8, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD8-206ENST00000528854 NISCHQ9Y2I1 1504 aa54.22■■■■■ 6.27
FRMD8-206ENST00000528854 ABCC9O60706 1549 aa49.55■■■■■ 5.52
FRMD8-206ENST00000528854 CCDC180Q9P1Z9 1646 aa48.86■■■■■ 5.41
FRMD8-206ENST00000528854 DNAJC5BQ9UF47 199 aa47.28■■■■■ 5.16
FRMD8-206ENST00000528854 RB1CC1Q8TDY2 1594 aa46.85■■■■■ 5.09
FRMD8-206ENST00000528854 NACADO15069 1562 aa46.41■■■■■ 5.02
FRMD8-206ENST00000528854 PABPN1Q86U42 306 aaKnown RBP eCLIP46.07■■■■■ 4.97
FRMD8-206ENST00000528854 DCAF8L2P0C7V8 631 aa45.94■■■■■ 4.94
FRMD8-206ENST00000528854 UNC13AQ9UPW8 1703 aa45.77■■■■■ 4.92
FRMD8-206ENST00000528854 MYO15BQ96JP2 1530 aa45.63■■■■■ 4.9
FRMD8-206ENST00000528854 BICRAQ9NZM4 1560 aa45.62■■■■■ 4.89
FRMD8-206ENST00000528854 SHROOM4Q9ULL8 1493 aa44.89■■■■■ 4.78
FRMD8-206ENST00000528854 DCAF1Q9Y4B6 1507 aa44.78■■■■■ 4.76
FRMD8-206ENST00000528854 ZCCHC6Q5VYS8 1495 aaKnown RBP44.77■■■■■ 4.76
FRMD8-206ENST00000528854 CC2D2AQ9P2K1 1620 aa44.73■■■■■ 4.75
FRMD8-206ENST00000528854 CECR2Q9BXF3 1484 aa44.72■■■■■ 4.75
FRMD8-206ENST00000528854 EIF4G1Q04637 1599 aaKnown RBP44.48■■■■■ 4.71
FRMD8-206ENST00000528854 SCRIBQ14160 1630 aa44.43■■■■■ 4.7
FRMD8-206ENST00000528854 DNAJC5Q9H3Z4 198 aa43.88■■■■■ 4.62
FRMD8-206ENST00000528854 CUX2O14529 1486 aa43.01■■■■■ 4.48
FRMD8-206ENST00000528854 NCAPD3P42695 1498 aa42.94■■■■■ 4.47
FRMD8-206ENST00000528854 ERCC6Q03468 1493 aa42.75■■■■■ 4.43
FRMD8-206ENST00000528854 ATAD2BQ9ULI0 1458 aa42.67■■■■■ 4.42
FRMD8-206ENST00000528854 HMGXB3Q12766 1538 aa42.47■■■■■ 4.39
FRMD8-206ENST00000528854 SMARCA2P51531 1590 aa42.44■■■■■ 4.38
FRMD8-206ENST00000528854 NESP48681 1621 aa42.41■■■■■ 4.38
FRMD8-206ENST00000528854 SMARCA4P51532 1647 aa42.38■■■■■ 4.37
FRMD8-206ENST00000528854 BAZ1BQ9UIG0 1483 aaKnown RBP42.13■■■■■ 4.34
FRMD8-206ENST00000528854 THOC2Q8NI27 1593 aaKnown RBP42.08■■■■■ 4.33
FRMD8-206ENST00000528854 BAZ1AQ9NRL2 1556 aaPredicted RBP42.07■■■■■ 4.33
FRMD8-206ENST00000528854 PEG3Q9GZU2 1588 aa42.05■■■■■ 4.32
FRMD8-206ENST00000528854 LAMC3Q9Y6N6 1575 aa41.97■■■■■ 4.31
FRMD8-206ENST00000528854 PDS5BQ9NTI5 1447 aa41.78■■■■■ 4.28
FRMD8-206ENST00000528854 MROH2BQ7Z745 1585 aa41.76■■■■■ 4.28
FRMD8-206ENST00000528854 KIF21AQ7Z4S6 1674 aa41.74■■■■■ 4.27
FRMD8-206ENST00000528854 CADPSQ9ULU8 1353 aa41.57■■■■■ 4.25
FRMD8-206ENST00000528854 TRIM41Q8WV44 630 aa41.49■■■■■ 4.23
FRMD8-206ENST00000528854 MRC2Q9UBG0 1479 aa41.44■■■■■ 4.22
FRMD8-206ENST00000528854 WDR62O43379 1518 aa41.38■■■■■ 4.21
FRMD8-206ENST00000528854 WIZO95785 1651 aa41.17■■■■■ 4.18
FRMD8-206ENST00000528854 CEP164Q9UPV0 1460 aa41.1■■■■■ 4.17
FRMD8-206ENST00000528854 FANCD2Q9BXW9 1451 aa41.04■■■■■ 4.16
FRMD8-206ENST00000528854 OSCARQ8IYS5 282 aa40.97■■■■■ 4.15
FRMD8-206ENST00000528854 CFTRP13569 1480 aa40.96■■■■■ 4.15
FRMD8-206ENST00000528854 URB2Q14146 1524 aaKnown RBP40.78■■■■■ 4.12
FRMD8-206ENST00000528854 RSF1Q96T23 1441 aaPredicted RBP40.68■■■■■ 4.1
FRMD8-206ENST00000528854 TOP2AP11388 1531 aaKnown RBP40.61■■■■■ 4.09
FRMD8-206ENST00000528854 RIMBP3CA6NJZ7 1639 aa40.44■■■■■ 4.06
FRMD8-206ENST00000528854 RIMBP3BA6NNM3 1639 aa40.44■■■■■ 4.06
FRMD8-206ENST00000528854 RIMBP3Q9UFD9 1639 aa40.44■■■■■ 4.06
FRMD8-206ENST00000528854 ZNF608Q9ULD9 1512 aaPredicted RBP40.38■■■■■ 4.06
FRMD8-206ENST00000528854 IFT140Q96RY7 1462 aa40.35■■■■■ 4.05
FRMD8-206ENST00000528854 PRDM2Q13029 1718 aa40.31■■■■■ 4.04
FRMD8-206ENST00000528854 ARHGEF11O15085 1522 aa40.27■■■■■ 4.04
FRMD8-206ENST00000528854 CCDC88BA6NC98 1476 aa40.22■■■■■ 4.03
FRMD8-206ENST00000528854 TOPBP1Q92547 1522 aa40.2■■■■■ 4.03
FRMD8-206ENST00000528854 ABCC8Q09428 1581 aa40.06■■■■■ 4
FRMD8-206ENST00000528854 EIF4G3O43432 1585 aaKnown RBP40.04■■■■■ 4
FRMD8-206ENST00000528854 CYB5RLQ6IPT4 315 aa40.03■■■■■ 4
FRMD8-206ENST00000528854 DNMBPQ6XZF7 1577 aa39.95■■■■□ 3.99
FRMD8-206ENST00000528854 AQRO60306 1485 aaKnown RBP eCLIP39.94■■■■□ 3.98
FRMD8-206ENST00000528854 TARBP1Q13395 1621 aaKnown RBP39.91■■■■□ 3.98
FRMD8-206ENST00000528854 ARAP1Q96P48 1450 aa39.86■■■■□ 3.97
FRMD8-206ENST00000528854 CHD1O14646 1710 aa39.84■■■■□ 3.97
FRMD8-206ENST00000528854 POLA1P09884 1462 aaPredicted RBP39.75■■■■□ 3.95
FRMD8-206ENST00000528854 TRHP20396 242 aaPredicted RBP39.72■■■■□ 3.95
FRMD8-206ENST00000528854 FBLN2P98095 1184 aa39.71■■■■□ 3.95
FRMD8-206ENST00000528854 RAD54L2Q9Y4B4 1467 aa39.62■■■■□ 3.93
FRMD8-206ENST00000528854 TDRD9Q8NDG6 1382 aaKnown RBP39.58■■■■□ 3.93
FRMD8-206ENST00000528854 SOGA1O94964 1423 aa39.57■■■■□ 3.92
FRMD8-206ENST00000528854 CLASP1Q7Z460 1538 aa39.48■■■■□ 3.91
FRMD8-206ENST00000528854 SNAPC4Q5SXM2 1469 aa39.44■■■■□ 3.9
FRMD8-206ENST00000528854 WDR97A6NE52 1622 aa39.4■■■■□ 3.9
FRMD8-206ENST00000528854 FGD5Q6ZNL6 1462 aa39.37■■■■□ 3.89
FRMD8-206ENST00000528854 CHMP7Q8WUX9 453 aaPredicted RBP39.36■■■■□ 3.89
FRMD8-206ENST00000528854 MAGI1Q96QZ7 1491 aaPredicted RBP39.34■■■■□ 3.89
FRMD8-206ENST00000528854 SYNJ1O43426 1573 aa39.3■■■■□ 3.88
FRMD8-206ENST00000528854 GRIN2BQ13224 1484 aa39.28■■■■□ 3.88
FRMD8-206ENST00000528854 CUX1P39880 1505 aa39.26■■■■□ 3.88
FRMD8-206ENST00000528854 SYNJ2O15056 1496 aa39.23■■■■□ 3.87
FRMD8-206ENST00000528854 GAPVD1Q14C86 1478 aa39.07■■■■□ 3.85
FRMD8-206ENST00000528854 AEBP2Q6ZN18 517 aaPredicted RBP39.03■■■■□ 3.84
FRMD8-206ENST00000528854 PBRM1Q86U86 1689 aa38.97■■■■□ 3.83
FRMD8-206ENST00000528854 ABCA10Q8WWZ4 1543 aa38.94■■■■□ 3.82
FRMD8-206ENST00000528854 ABCA5Q8WWZ7 1642 aa38.89■■■■□ 3.82
FRMD8-206ENST00000528854 ERCC6L2Q5T890 1561 aa38.82■■■■□ 3.8
FRMD8-206ENST00000528854 GRIN2AQ12879 1464 aa38.77■■■■□ 3.8
FRMD8-206ENST00000528854 NUP160Q12769 1436 aa38.72■■■■□ 3.79
FRMD8-206ENST00000528854 CEP170Q5SW79 1584 aa38.67■■■■□ 3.78
FRMD8-206ENST00000528854 WRNQ14191 1432 aaPredicted RBP eCLIP38.62■■■■□ 3.77
FRMD8-206ENST00000528854 ADAMTS12P58397 1594 aa38.61■■■■□ 3.77
FRMD8-206ENST00000528854 SHROOM2Q13796 1616 aa38.59■■■■□ 3.77
FRMD8-206ENST00000528854 FHAD1B1AJZ9 1412 aa38.54■■■■□ 3.76
FRMD8-206ENST00000528854 TOP2BQ02880 1626 aa38.42■■■■□ 3.74
FRMD8-206ENST00000528854 BIVM-ERCC5R4GMW8 1640 aa38.41■■■■□ 3.74
FRMD8-206ENST00000528854 ERICH3Q5RHP9 1530 aa38.4■■■■□ 3.74
FRMD8-206ENST00000528854 KIF13AQ9H1H9 1805 aa38.4■■■■□ 3.74
FRMD8-206ENST00000528854 PRG4Q92954 1404 aaPredicted RBP38.36■■■■□ 3.73
FRMD8-206ENST00000528854 JPH4Q96JJ6 628 aa38.33■■■■□ 3.73
FRMD8-206ENST00000528854 SUPT5HO00267 1087 aaKnown RBP38.25■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms