RNA–Protein interactions for RNA: ENST00000528846.5

COLCA2-203, Transcript of colorectal cancer associated 2, humanhuman

TSL 3

Gene COLCA2, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-203ENST00000528846 NISCHQ9Y2I1 1504 aa48.81■■■■■ 5.4
COLCA2-203ENST00000528846 ABCC9O60706 1549 aa43.58■■■■■ 4.57
COLCA2-203ENST00000528846 CCDC180Q9P1Z9 1646 aa43.56■■■■■ 4.56
COLCA2-203ENST00000528846 RB1CC1Q8TDY2 1594 aa41.47■■■■■ 4.23
COLCA2-203ENST00000528846 DCAF8L2P0C7V8 631 aa41.34■■■■■ 4.21
COLCA2-203ENST00000528846 NACADO15069 1562 aa41.25■■■■■ 4.19
COLCA2-203ENST00000528846 DNAJC5BQ9UF47 199 aa40.78■■■■■ 4.12
COLCA2-203ENST00000528846 MYO15BQ96JP2 1530 aa40.73■■■■■ 4.11
COLCA2-203ENST00000528846 PABPN1Q86U42 306 aaKnown RBP eCLIP40.71■■■■■ 4.11
COLCA2-203ENST00000528846 ZCCHC6Q5VYS8 1495 aaKnown RBP40.46■■■■■ 4.07
COLCA2-203ENST00000528846 UNC13AQ9UPW8 1703 aa40.37■■■■■ 4.05
COLCA2-203ENST00000528846 DCAF1Q9Y4B6 1507 aa40.28■■■■■ 4.04
COLCA2-203ENST00000528846 BICRAQ9NZM4 1560 aa40.24■■■■■ 4.03
COLCA2-203ENST00000528846 SCRIBQ14160 1630 aa39.82■■■■□ 3.96
COLCA2-203ENST00000528846 SHROOM4Q9ULL8 1493 aa39.71■■■■□ 3.95
COLCA2-203ENST00000528846 CC2D2AQ9P2K1 1620 aa39.29■■■■□ 3.88
COLCA2-203ENST00000528846 EIF4G1Q04637 1599 aaKnown RBP39.26■■■■□ 3.88
COLCA2-203ENST00000528846 CECR2Q9BXF3 1484 aa39.22■■■■□ 3.87
COLCA2-203ENST00000528846 NCAPD3P42695 1498 aa38.14■■■■□ 3.7
COLCA2-203ENST00000528846 ATAD2BQ9ULI0 1458 aa38.05■■■■□ 3.68
COLCA2-203ENST00000528846 SMARCA4P51532 1647 aa37.98■■■■□ 3.67
COLCA2-203ENST00000528846 SMARCA2P51531 1590 aa37.9■■■■□ 3.66
COLCA2-203ENST00000528846 BAZ1AQ9NRL2 1556 aaPredicted RBP37.85■■■■□ 3.65
COLCA2-203ENST00000528846 HMGXB3Q12766 1538 aa37.78■■■■□ 3.64
COLCA2-203ENST00000528846 BAZ1BQ9UIG0 1483 aaKnown RBP37.69■■■■□ 3.62
COLCA2-203ENST00000528846 MROH2BQ7Z745 1585 aa37.63■■■■□ 3.61
COLCA2-203ENST00000528846 ERCC6Q03468 1493 aa37.61■■■■□ 3.61
COLCA2-203ENST00000528846 PEG3Q9GZU2 1588 aa37.59■■■■□ 3.61
COLCA2-203ENST00000528846 NESP48681 1621 aa37.47■■■■□ 3.59
COLCA2-203ENST00000528846 CUX2O14529 1486 aa37.42■■■■□ 3.58
COLCA2-203ENST00000528846 DNAJC5Q9H3Z4 198 aa37.29■■■■□ 3.56
COLCA2-203ENST00000528846 LAMC3Q9Y6N6 1575 aa37.17■■■■□ 3.54
COLCA2-203ENST00000528846 WIZO95785 1651 aa37.12■■■■□ 3.53
COLCA2-203ENST00000528846 PDS5BQ9NTI5 1447 aa37.05■■■■□ 3.52
COLCA2-203ENST00000528846 CADPSQ9ULU8 1353 aa37.03■■■■□ 3.52
COLCA2-203ENST00000528846 RSF1Q96T23 1441 aaPredicted RBP36.96■■■■□ 3.51
COLCA2-203ENST00000528846 THOC2Q8NI27 1593 aaKnown RBP36.93■■■■□ 3.5
COLCA2-203ENST00000528846 KIF21AQ7Z4S6 1674 aa36.85■■■■□ 3.49
COLCA2-203ENST00000528846 TOP2AP11388 1531 aaKnown RBP36.69■■■■□ 3.46
COLCA2-203ENST00000528846 MRC2Q9UBG0 1479 aa36.67■■■■□ 3.46
COLCA2-203ENST00000528846 CFTRP13569 1480 aa36.6■■■■□ 3.45
COLCA2-203ENST00000528846 FANCD2Q9BXW9 1451 aa36.57■■■■□ 3.45
COLCA2-203ENST00000528846 CEP164Q9UPV0 1460 aa36.57■■■■□ 3.45
COLCA2-203ENST00000528846 WDR62O43379 1518 aa36.53■■■■□ 3.44
COLCA2-203ENST00000528846 CCDC88BA6NC98 1476 aa36.35■■■■□ 3.41
COLCA2-203ENST00000528846 URB2Q14146 1524 aaKnown RBP36.24■■■■□ 3.39
COLCA2-203ENST00000528846 PRDM2Q13029 1718 aa36■■■■□ 3.35
COLCA2-203ENST00000528846 OSCARQ8IYS5 282 aa35.89■■■■□ 3.34
COLCA2-203ENST00000528846 TOPBP1Q92547 1522 aa35.88■■■■□ 3.33
COLCA2-203ENST00000528846 IFT140Q96RY7 1462 aa35.85■■■■□ 3.33
COLCA2-203ENST00000528846 ABCC8Q09428 1581 aa35.82■■■■□ 3.32
COLCA2-203ENST00000528846 TRIM41Q8WV44 630 aa35.79■■■■□ 3.32
COLCA2-203ENST00000528846 ZNF608Q9ULD9 1512 aaPredicted RBP35.78■■■■□ 3.32
COLCA2-203ENST00000528846 DNMBPQ6XZF7 1577 aa35.72■■■■□ 3.31
COLCA2-203ENST00000528846 SUPT5HO00267 1087 aaKnown RBP35.61■■■■□ 3.29
COLCA2-203ENST00000528846 AQRO60306 1485 aaKnown RBP eCLIP35.53■■■■□ 3.28
COLCA2-203ENST00000528846 POLA1P09884 1462 aaPredicted RBP35.53■■■■□ 3.28
COLCA2-203ENST00000528846 EIF4G3O43432 1585 aaKnown RBP35.49■■■■□ 3.27
COLCA2-203ENST00000528846 TARBP1Q13395 1621 aaKnown RBP35.48■■■■□ 3.27
COLCA2-203ENST00000528846 RAD54L2Q9Y4B4 1467 aa35.44■■■■□ 3.26
COLCA2-203ENST00000528846 SOGA1O94964 1423 aa35.44■■■■□ 3.26
COLCA2-203ENST00000528846 TDRD9Q8NDG6 1382 aaKnown RBP35.37■■■■□ 3.25
COLCA2-203ENST00000528846 FBLN2P98095 1184 aa35.34■■■■□ 3.25
COLCA2-203ENST00000528846 FGD5Q6ZNL6 1462 aa35.34■■■■□ 3.25
COLCA2-203ENST00000528846 CUX1P39880 1505 aa35.32■■■■□ 3.25
COLCA2-203ENST00000528846 RIMBP3CA6NJZ7 1639 aa35.21■■■■□ 3.23
COLCA2-203ENST00000528846 RIMBP3BA6NNM3 1639 aa35.21■■■■□ 3.23
COLCA2-203ENST00000528846 RIMBP3Q9UFD9 1639 aa35.21■■■■□ 3.23
COLCA2-203ENST00000528846 ARHGEF11O15085 1522 aa35.17■■■■□ 3.22
COLCA2-203ENST00000528846 CHD1O14646 1710 aa35.13■■■■□ 3.21
COLCA2-203ENST00000528846 SNAPC4Q5SXM2 1469 aa35.12■■■■□ 3.21
COLCA2-203ENST00000528846 WDR97A6NE52 1622 aa35.1■■■■□ 3.21
COLCA2-203ENST00000528846 CHMP7Q8WUX9 453 aaPredicted RBP35.09■■■■□ 3.21
COLCA2-203ENST00000528846 GRIN2BQ13224 1484 aa35.06■■■■□ 3.2
COLCA2-203ENST00000528846 CYB5RLQ6IPT4 315 aa35.06■■■■□ 3.2
COLCA2-203ENST00000528846 MAGI1Q96QZ7 1491 aaPredicted RBP35.01■■■■□ 3.19
COLCA2-203ENST00000528846 GAPVD1Q14C86 1478 aa34.97■■■■□ 3.19
COLCA2-203ENST00000528846 ABCA10Q8WWZ4 1543 aa34.94■■■■□ 3.18
COLCA2-203ENST00000528846 SYNJ2O15056 1496 aa34.91■■■■□ 3.18
COLCA2-203ENST00000528846 WRNQ14191 1432 aaPredicted RBP eCLIP34.89■■■■□ 3.18
COLCA2-203ENST00000528846 ARAP1Q96P48 1450 aa34.85■■■■□ 3.17
COLCA2-203ENST00000528846 SYNJ1O43426 1573 aa34.83■■■■□ 3.17
COLCA2-203ENST00000528846 CLASP1Q7Z460 1538 aa34.81■■■■□ 3.16
COLCA2-203ENST00000528846 ABCA5Q8WWZ7 1642 aa34.79■■■■□ 3.16
COLCA2-203ENST00000528846 PBRM1Q86U86 1689 aa34.78■■■■□ 3.16
COLCA2-203ENST00000528846 TOP2BQ02880 1626 aa34.77■■■■□ 3.16
COLCA2-203ENST00000528846 BIVM-ERCC5R4GMW8 1640 aa34.72■■■■□ 3.15
COLCA2-203ENST00000528846 TRHP20396 242 aaPredicted RBP34.62■■■■□ 3.13
COLCA2-203ENST00000528846 GRIN2AQ12879 1464 aa34.59■■■■□ 3.13
COLCA2-203ENST00000528846 FHAD1B1AJZ9 1412 aa34.55■■■■□ 3.12
COLCA2-203ENST00000528846 ADAMTS12P58397 1594 aa34.53■■■■□ 3.12
COLCA2-203ENST00000528846 ERICH3Q5RHP9 1530 aa34.49■■■■□ 3.11
COLCA2-203ENST00000528846 NUP160Q12769 1436 aa34.47■■■■□ 3.11
COLCA2-203ENST00000528846 CEP170Q5SW79 1584 aa34.41■■■■□ 3.1
COLCA2-203ENST00000528846 ERCC6L2Q5T890 1561 aa34.32■■■■□ 3.09
COLCA2-203ENST00000528846 JPH4Q96JJ6 628 aa34.24■■■■□ 3.07
COLCA2-203ENST00000528846 IGF1RP08069 1367 aa34.21■■■■□ 3.07
COLCA2-203ENST00000528846 KIF27Q86VH2 1401 aa34.21■■■■□ 3.07
COLCA2-203ENST00000528846 SHROOM2Q13796 1616 aa34.19■■■■□ 3.06
COLCA2-203ENST00000528846 PRG4Q92954 1404 aaPredicted RBP34.18■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms