RNA–Protein interactions for RNA: ENST00000528789.1

CHRDL2-206, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-206ENST00000528789 NISCHQ9Y2I1 1504 aa42.2■■■■■ 4.35
CHRDL2-206ENST00000528789 CCDC180Q9P1Z9 1646 aa37.42■■■■□ 3.58
CHRDL2-206ENST00000528789 ABCC9O60706 1549 aa36.64■■■■□ 3.46
CHRDL2-206ENST00000528789 DCAF8L2P0C7V8 631 aa35.33■■■■□ 3.25
CHRDL2-206ENST00000528789 RB1CC1Q8TDY2 1594 aa35.21■■■■□ 3.23
CHRDL2-206ENST00000528789 NACADO15069 1562 aa35.17■■■■□ 3.22
CHRDL2-206ENST00000528789 ZCCHC6Q5VYS8 1495 aaKnown RBP35.17■■■■□ 3.22
CHRDL2-206ENST00000528789 MYO15BQ96JP2 1530 aa34.94■■■■□ 3.18
CHRDL2-206ENST00000528789 DCAF1Q9Y4B6 1507 aa34.85■■■■□ 3.17
CHRDL2-206ENST00000528789 UNC13AQ9UPW8 1703 aa34.43■■■■□ 3.1
CHRDL2-206ENST00000528789 PABPN1Q86U42 306 aaKnown RBP eCLIP34.29■■■■□ 3.08
CHRDL2-206ENST00000528789 SCRIBQ14160 1630 aa34.26■■■■□ 3.08
CHRDL2-206ENST00000528789 BICRAQ9NZM4 1560 aa34.16■■■■□ 3.06
CHRDL2-206ENST00000528789 SHROOM4Q9ULL8 1493 aa33.72■■■□□ 2.99
CHRDL2-206ENST00000528789 DNAJC5BQ9UF47 199 aa33.55■■■□□ 2.96
CHRDL2-206ENST00000528789 EIF4G1Q04637 1599 aaKnown RBP33.26■■■□□ 2.91
CHRDL2-206ENST00000528789 CC2D2AQ9P2K1 1620 aa33.11■■■□□ 2.89
CHRDL2-206ENST00000528789 CECR2Q9BXF3 1484 aa32.92■■■□□ 2.86
CHRDL2-206ENST00000528789 SMARCA4P51532 1647 aa32.73■■■□□ 2.83
CHRDL2-206ENST00000528789 BAZ1AQ9NRL2 1556 aaPredicted RBP32.68■■■□□ 2.82
CHRDL2-206ENST00000528789 MROH2BQ7Z745 1585 aa32.56■■■□□ 2.8
CHRDL2-206ENST00000528789 ATAD2BQ9ULI0 1458 aa32.53■■■□□ 2.8
CHRDL2-206ENST00000528789 SMARCA2P51531 1590 aa32.46■■■□□ 2.79
CHRDL2-206ENST00000528789 NCAPD3P42695 1498 aa32.46■■■□□ 2.79
CHRDL2-206ENST00000528789 PEG3Q9GZU2 1588 aa32.35■■■□□ 2.77
CHRDL2-206ENST00000528789 HMGXB3Q12766 1538 aa32.31■■■□□ 2.76
CHRDL2-206ENST00000528789 BAZ1BQ9UIG0 1483 aaKnown RBP32.28■■■□□ 2.76
CHRDL2-206ENST00000528789 WIZO95785 1651 aa32.22■■■□□ 2.75
CHRDL2-206ENST00000528789 RSF1Q96T23 1441 aaPredicted RBP32.21■■■□□ 2.75
CHRDL2-206ENST00000528789 TOP2AP11388 1531 aaKnown RBP31.85■■■□□ 2.69
CHRDL2-206ENST00000528789 NESP48681 1621 aa31.75■■■□□ 2.67
CHRDL2-206ENST00000528789 LAMC3Q9Y6N6 1575 aa31.59■■■□□ 2.65
CHRDL2-206ENST00000528789 SUPT5HO00267 1087 aaKnown RBP31.56■■■□□ 2.64
CHRDL2-206ENST00000528789 ERCC6Q03468 1493 aa31.56■■■□□ 2.64
CHRDL2-206ENST00000528789 CADPSQ9ULU8 1353 aa31.55■■■□□ 2.64
CHRDL2-206ENST00000528789 CCDC88BA6NC98 1476 aa31.5■■■□□ 2.63
CHRDL2-206ENST00000528789 PDS5BQ9NTI5 1447 aa31.39■■■□□ 2.62
CHRDL2-206ENST00000528789 CFTRP13569 1480 aa31.37■■■□□ 2.61
CHRDL2-206ENST00000528789 KIF21AQ7Z4S6 1674 aa31.33■■■□□ 2.61
CHRDL2-206ENST00000528789 FANCD2Q9BXW9 1451 aa31.21■■■□□ 2.59
CHRDL2-206ENST00000528789 THOC2Q8NI27 1593 aaKnown RBP31.18■■■□□ 2.58
CHRDL2-206ENST00000528789 CEP164Q9UPV0 1460 aa31.15■■■□□ 2.58
CHRDL2-206ENST00000528789 CUX2O14529 1486 aa31.13■■■□□ 2.57
CHRDL2-206ENST00000528789 PRDM2Q13029 1718 aa31.11■■■□□ 2.57
CHRDL2-206ENST00000528789 MRC2Q9UBG0 1479 aa31.08■■■□□ 2.57
CHRDL2-206ENST00000528789 WDR62O43379 1518 aa30.96■■■□□ 2.55
CHRDL2-206ENST00000528789 URB2Q14146 1524 aaKnown RBP30.9■■■□□ 2.54
CHRDL2-206ENST00000528789 TOPBP1Q92547 1522 aa30.72■■■□□ 2.51
CHRDL2-206ENST00000528789 DNMBPQ6XZF7 1577 aa30.67■■■□□ 2.5
CHRDL2-206ENST00000528789 ABCC8Q09428 1581 aa30.66■■■□□ 2.5
CHRDL2-206ENST00000528789 CUX1P39880 1505 aa30.53■■■□□ 2.48
CHRDL2-206ENST00000528789 IFT140Q96RY7 1462 aa30.49■■■□□ 2.47
CHRDL2-206ENST00000528789 POLA1P09884 1462 aaPredicted RBP30.46■■■□□ 2.47
CHRDL2-206ENST00000528789 FGD5Q6ZNL6 1462 aa30.42■■■□□ 2.46
CHRDL2-206ENST00000528789 ZNF608Q9ULD9 1512 aaPredicted RBP30.39■■■□□ 2.46
CHRDL2-206ENST00000528789 RAD54L2Q9Y4B4 1467 aa30.38■■■□□ 2.45
CHRDL2-206ENST00000528789 WRNQ14191 1432 aaPredicted RBP eCLIP30.37■■■□□ 2.45
CHRDL2-206ENST00000528789 TARBP1Q13395 1621 aaKnown RBP30.36■■■□□ 2.45
CHRDL2-206ENST00000528789 SOGA1O94964 1423 aa30.34■■■□□ 2.45
CHRDL2-206ENST00000528789 SYNJ1O43426 1573 aa30.3■■■□□ 2.44
CHRDL2-206ENST00000528789 TOP2BQ02880 1626 aa30.26■■■□□ 2.44
CHRDL2-206ENST00000528789 BIVM-ERCC5R4GMW8 1640 aa30.25■■■□□ 2.43
CHRDL2-206ENST00000528789 EIF4G3O43432 1585 aaKnown RBP30.24■■■□□ 2.43
CHRDL2-206ENST00000528789 AQRO60306 1485 aaKnown RBP eCLIP30.23■■■□□ 2.43
CHRDL2-206ENST00000528789 TDRD9Q8NDG6 1382 aaKnown RBP30.2■■■□□ 2.43
CHRDL2-206ENST00000528789 WDR97A6NE52 1622 aa30.12■■■□□ 2.41
CHRDL2-206ENST00000528789 ABCA10Q8WWZ4 1543 aa30.09■■■□□ 2.41
CHRDL2-206ENST00000528789 DNAJC5Q9H3Z4 198 aa30.09■■■□□ 2.41
CHRDL2-206ENST00000528789 GAPVD1Q14C86 1478 aa29.99■■■□□ 2.39
CHRDL2-206ENST00000528789 ABCA5Q8WWZ7 1642 aa29.97■■■□□ 2.39
CHRDL2-206ENST00000528789 GRIN2BQ13224 1484 aa29.96■■■□□ 2.39
CHRDL2-206ENST00000528789 SNAPC4Q5SXM2 1469 aa29.95■■■□□ 2.39
CHRDL2-206ENST00000528789 PBRM1Q86U86 1689 aa29.91■■■□□ 2.38
CHRDL2-206ENST00000528789 FBLN2P98095 1184 aa29.89■■■□□ 2.38
CHRDL2-206ENST00000528789 OSCARQ8IYS5 282 aa29.89■■■□□ 2.38
CHRDL2-206ENST00000528789 MAGI1Q96QZ7 1491 aaPredicted RBP29.85■■■□□ 2.37
CHRDL2-206ENST00000528789 CHD1O14646 1710 aa29.85■■■□□ 2.37
CHRDL2-206ENST00000528789 CHMP7Q8WUX9 453 aaPredicted RBP29.77■■■□□ 2.36
CHRDL2-206ENST00000528789 SYNJ2O15056 1496 aa29.75■■■□□ 2.35
CHRDL2-206ENST00000528789 TRIM41Q8WV44 630 aa29.75■■■□□ 2.35
CHRDL2-206ENST00000528789 KIF27Q86VH2 1401 aa29.71■■■□□ 2.35
CHRDL2-206ENST00000528789 ERICH3Q5RHP9 1530 aa29.71■■■□□ 2.35
CHRDL2-206ENST00000528789 ADAMTS12P58397 1594 aa29.69■■■□□ 2.34
CHRDL2-206ENST00000528789 FHAD1B1AJZ9 1412 aa29.63■■■□□ 2.33
CHRDL2-206ENST00000528789 IGF1RP08069 1367 aa29.59■■■□□ 2.33
CHRDL2-206ENST00000528789 GRIN2AQ12879 1464 aa29.59■■■□□ 2.33
CHRDL2-206ENST00000528789 RUSC2Q8N2Y8 1516 aa29.54■■■□□ 2.32
CHRDL2-206ENST00000528789 CLASP1Q7Z460 1538 aa29.5■■■□□ 2.31
CHRDL2-206ENST00000528789 CUL7Q14999 1698 aa29.47■■■□□ 2.31
CHRDL2-206ENST00000528789 CHIC1Q5VXU3 224 aa29.46■■■□□ 2.31
CHRDL2-206ENST00000528789 CEP170Q5SW79 1584 aa29.45■■■□□ 2.31
CHRDL2-206ENST00000528789 NUP160Q12769 1436 aa29.44■■■□□ 2.3
CHRDL2-206ENST00000528789 CARMIL1Q5VZK9 1371 aa29.42■■■□□ 2.3
CHRDL2-206ENST00000528789 RIMBP3CA6NJZ7 1639 aa29.42■■■□□ 2.3
CHRDL2-206ENST00000528789 RIMBP3BA6NNM3 1639 aa29.42■■■□□ 2.3
CHRDL2-206ENST00000528789 RIMBP3Q9UFD9 1639 aa29.42■■■□□ 2.3
CHRDL2-206ENST00000528789 ARHGEF11O15085 1522 aa29.41■■■□□ 2.3
CHRDL2-206ENST00000528789 RAPGEF2Q9Y4G8 1499 aa29.25■■■□□ 2.27
CHRDL2-206ENST00000528789 FAM9AQ8IZU1 332 aaPredicted RBP29.21■■■□□ 2.27
CHRDL2-206ENST00000528789 ARAP1Q96P48 1450 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms