RNA–Protein interactions for RNA: ENST00000528786.2

MED17-205, Transcript of mediator complex subunit 17, humanhuman

TSL 5

Gene MED17, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED17-205ENST00000528786 NISCHQ9Y2I1 1504 aa51.06■■■■■ 5.76
MED17-205ENST00000528786 CCDC180Q9P1Z9 1646 aa45.55■■■■■ 4.88
MED17-205ENST00000528786 ABCC9O60706 1549 aa45.38■■■■■ 4.86
MED17-205ENST00000528786 RB1CC1Q8TDY2 1594 aa43.27■■■■■ 4.52
MED17-205ENST00000528786 NACADO15069 1562 aa43.07■■■■■ 4.49
MED17-205ENST00000528786 DCAF8L2P0C7V8 631 aa43.07■■■■■ 4.49
MED17-205ENST00000528786 MYO15BQ96JP2 1530 aa42.61■■■■■ 4.41
MED17-205ENST00000528786 PABPN1Q86U42 306 aaKnown RBP eCLIP42.38■■■■■ 4.37
MED17-205ENST00000528786 DNAJC5BQ9UF47 199 aa42.38■■■■■ 4.37
MED17-205ENST00000528786 ZCCHC6Q5VYS8 1495 aaKnown RBP42.36■■■■■ 4.37
MED17-205ENST00000528786 UNC13AQ9UPW8 1703 aa42.2■■■■■ 4.35
MED17-205ENST00000528786 DCAF1Q9Y4B6 1507 aa42.17■■■■■ 4.34
MED17-205ENST00000528786 BICRAQ9NZM4 1560 aa42.02■■■■■ 4.32
MED17-205ENST00000528786 SCRIBQ14160 1630 aa41.59■■■■■ 4.25
MED17-205ENST00000528786 SHROOM4Q9ULL8 1493 aa41.47■■■■■ 4.23
MED17-205ENST00000528786 EIF4G1Q04637 1599 aaKnown RBP40.96■■■■■ 4.15
MED17-205ENST00000528786 CC2D2AQ9P2K1 1620 aa40.96■■■■■ 4.15
MED17-205ENST00000528786 CECR2Q9BXF3 1484 aa40.85■■■■■ 4.13
MED17-205ENST00000528786 NCAPD3P42695 1498 aa39.82■■■■□ 3.97
MED17-205ENST00000528786 ATAD2BQ9ULI0 1458 aa39.74■■■■□ 3.95
MED17-205ENST00000528786 SMARCA4P51532 1647 aa39.71■■■■□ 3.95
MED17-205ENST00000528786 SMARCA2P51531 1590 aa39.59■■■■□ 3.93
MED17-205ENST00000528786 BAZ1AQ9NRL2 1556 aaPredicted RBP39.58■■■■□ 3.93
MED17-205ENST00000528786 HMGXB3Q12766 1538 aa39.48■■■■□ 3.91
MED17-205ENST00000528786 MROH2BQ7Z745 1585 aa39.35■■■■□ 3.89
MED17-205ENST00000528786 BAZ1BQ9UIG0 1483 aaKnown RBP39.35■■■■□ 3.89
MED17-205ENST00000528786 PEG3Q9GZU2 1588 aa39.33■■■■□ 3.89
MED17-205ENST00000528786 ERCC6Q03468 1493 aa39.14■■■■□ 3.86
MED17-205ENST00000528786 NESP48681 1621 aa39.07■■■■□ 3.85
MED17-205ENST00000528786 CUX2O14529 1486 aa38.95■■■■□ 3.83
MED17-205ENST00000528786 WIZO95785 1651 aa38.84■■■■□ 3.81
MED17-205ENST00000528786 LAMC3Q9Y6N6 1575 aa38.79■■■■□ 3.8
MED17-205ENST00000528786 RSF1Q96T23 1441 aaPredicted RBP38.7■■■■□ 3.79
MED17-205ENST00000528786 DNAJC5Q9H3Z4 198 aa38.66■■■■□ 3.78
MED17-205ENST00000528786 CADPSQ9ULU8 1353 aa38.65■■■■□ 3.78
MED17-205ENST00000528786 PDS5BQ9NTI5 1447 aa38.63■■■■□ 3.77
MED17-205ENST00000528786 THOC2Q8NI27 1593 aaKnown RBP38.53■■■■□ 3.76
MED17-205ENST00000528786 KIF21AQ7Z4S6 1674 aa38.47■■■■□ 3.75
MED17-205ENST00000528786 TOP2AP11388 1531 aaKnown RBP38.39■■■■□ 3.74
MED17-205ENST00000528786 CFTRP13569 1480 aa38.25■■■■□ 3.71
MED17-205ENST00000528786 MRC2Q9UBG0 1479 aa38.25■■■■□ 3.71
MED17-205ENST00000528786 FANCD2Q9BXW9 1451 aa38.17■■■■□ 3.7
MED17-205ENST00000528786 CEP164Q9UPV0 1460 aa38.15■■■■□ 3.7
MED17-205ENST00000528786 WDR62O43379 1518 aa38.12■■■■□ 3.69
MED17-205ENST00000528786 CCDC88BA6NC98 1476 aa38.02■■■■□ 3.68
MED17-205ENST00000528786 URB2Q14146 1524 aaKnown RBP37.83■■■■□ 3.65
MED17-205ENST00000528786 PRDM2Q13029 1718 aa37.7■■■■□ 3.63
MED17-205ENST00000528786 TOPBP1Q92547 1522 aa37.47■■■■□ 3.59
MED17-205ENST00000528786 ABCC8Q09428 1581 aa37.42■■■■□ 3.58
MED17-205ENST00000528786 IFT140Q96RY7 1462 aa37.4■■■■□ 3.58
MED17-205ENST00000528786 ZNF608Q9ULD9 1512 aaPredicted RBP37.33■■■■□ 3.57
MED17-205ENST00000528786 DNMBPQ6XZF7 1577 aa37.33■■■■□ 3.57
MED17-205ENST00000528786 OSCARQ8IYS5 282 aa37.32■■■■□ 3.56
MED17-205ENST00000528786 SUPT5HO00267 1087 aaKnown RBP37.28■■■■□ 3.56
MED17-205ENST00000528786 POLA1P09884 1462 aaPredicted RBP37.12■■■■□ 3.53
MED17-205ENST00000528786 TRIM41Q8WV44 630 aa37.09■■■■□ 3.53
MED17-205ENST00000528786 TARBP1Q13395 1621 aaKnown RBP37.08■■■■□ 3.53
MED17-205ENST00000528786 AQRO60306 1485 aaKnown RBP eCLIP37.06■■■■□ 3.528e-9■■□□□ 13.6
MED17-205ENST00000528786 EIF4G3O43432 1585 aaKnown RBP37.05■■■■□ 3.52
MED17-205ENST00000528786 RAD54L2Q9Y4B4 1467 aa37.01■■■■□ 3.51
MED17-205ENST00000528786 SOGA1O94964 1423 aa37■■■■□ 3.51
MED17-205ENST00000528786 CUX1P39880 1505 aa36.94■■■■□ 3.5
MED17-205ENST00000528786 FGD5Q6ZNL6 1462 aa36.93■■■■□ 3.5
MED17-205ENST00000528786 TDRD9Q8NDG6 1382 aaKnown RBP36.91■■■■□ 3.5
MED17-205ENST00000528786 FBLN2P98095 1184 aa36.78■■■■□ 3.48
MED17-205ENST00000528786 WDR97A6NE52 1622 aa36.69■■■■□ 3.46
MED17-205ENST00000528786 CHD1O14646 1710 aa36.67■■■■□ 3.46
MED17-205ENST00000528786 RIMBP3CA6NJZ7 1639 aa36.67■■■■□ 3.46
MED17-205ENST00000528786 RIMBP3BA6NNM3 1639 aa36.67■■■■□ 3.46
MED17-205ENST00000528786 RIMBP3Q9UFD9 1639 aa36.67■■■■□ 3.46
MED17-205ENST00000528786 SNAPC4Q5SXM2 1469 aa36.64■■■■□ 3.46
MED17-205ENST00000528786 ARHGEF11O15085 1522 aa36.63■■■■□ 3.45
MED17-205ENST00000528786 GRIN2BQ13224 1484 aa36.6■■■■□ 3.45
MED17-205ENST00000528786 CHMP7Q8WUX9 453 aaPredicted RBP36.56■■■■□ 3.44
MED17-205ENST00000528786 MAGI1Q96QZ7 1491 aaPredicted RBP36.56■■■■□ 3.44
MED17-205ENST00000528786 ABCA10Q8WWZ4 1543 aa36.53■■■■□ 3.44
MED17-205ENST00000528786 GAPVD1Q14C86 1478 aa36.52■■■■□ 3.44
MED17-205ENST00000528786 WRNQ14191 1432 aaPredicted RBP eCLIP36.48■■■■□ 3.43
MED17-205ENST00000528786 SYNJ2O15056 1496 aa36.44■■■■□ 3.42
MED17-205ENST00000528786 CYB5RLQ6IPT4 315 aa36.44■■■■□ 3.42
MED17-205ENST00000528786 TOP2BQ02880 1626 aa36.4■■■■□ 3.42
MED17-205ENST00000528786 ABCA5Q8WWZ7 1642 aa36.38■■■■□ 3.41
MED17-205ENST00000528786 SYNJ1O43426 1573 aa36.37■■■■□ 3.41
MED17-205ENST00000528786 BIVM-ERCC5R4GMW8 1640 aa36.37■■■■□ 3.41
MED17-205ENST00000528786 PBRM1Q86U86 1689 aa36.35■■■■□ 3.41
MED17-205ENST00000528786 CLASP1Q7Z460 1538 aa36.34■■■■□ 3.41
MED17-205ENST00000528786 ARAP1Q96P48 1450 aa36.31■■■■□ 3.4
MED17-205ENST00000528786 GRIN2AQ12879 1464 aa36.12■■■■□ 3.37
MED17-205ENST00000528786 ADAMTS12P58397 1594 aa36.1■■■■□ 3.37
MED17-205ENST00000528786 FHAD1B1AJZ9 1412 aa36.08■■■■□ 3.37
MED17-205ENST00000528786 ERICH3Q5RHP9 1530 aa36.05■■■■□ 3.36
MED17-205ENST00000528786 NUP160Q12769 1436 aa36■■■■□ 3.35
MED17-205ENST00000528786 CEP170Q5SW79 1584 aa35.95■■■■□ 3.35
MED17-205ENST00000528786 TRHP20396 242 aaPredicted RBP35.91■■■■□ 3.34
MED17-205ENST00000528786 ERCC6L2Q5T890 1561 aa35.82■■■■□ 3.32
MED17-205ENST00000528786 KIF27Q86VH2 1401 aa35.77■■■■□ 3.32
MED17-205ENST00000528786 IGF1RP08069 1367 aa35.76■■■■□ 3.32
MED17-205ENST00000528786 SHROOM2Q13796 1616 aa35.74■■■■□ 3.31
MED17-205ENST00000528786 JPH4Q96JJ6 628 aa35.71■■■■□ 3.31
MED17-205ENST00000528786 PRG4Q92954 1404 aaPredicted RBP35.66■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms