RNA–Protein interactions for RNA: ENST00000528772.1

CCDC136-215, Transcript of coiled-coil domain containing 136, humanhuman

TSL 4

Gene CCDC136, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136-215ENST00000528772 NISCHQ9Y2I1 1504 aa29.92■■■□□ 2.38
CCDC136-215ENST00000528772 CCDC180Q9P1Z9 1646 aa26.61■■□□□ 1.85
CCDC136-215ENST00000528772 ABCC9O60706 1549 aa26.26■■□□□ 1.79
CCDC136-215ENST00000528772 RB1CC1Q8TDY2 1594 aa25.15■■□□□ 1.62
CCDC136-215ENST00000528772 NACADO15069 1562 aa25.1■■□□□ 1.61
CCDC136-215ENST00000528772 DCAF8L2P0C7V8 631 aa25.06■■□□□ 1.6
CCDC136-215ENST00000528772 MYO15BQ96JP2 1530 aa24.93■■□□□ 1.58
CCDC136-215ENST00000528772 ZCCHC6Q5VYS8 1495 aaKnown RBP24.89■■□□□ 1.57
CCDC136-215ENST00000528772 DCAF1Q9Y4B6 1507 aa24.76■■□□□ 1.55
CCDC136-215ENST00000528772 PABPN1Q86U42 306 aaKnown RBP eCLIP24.55■■□□□ 1.52
CCDC136-215ENST00000528772 UNC13AQ9UPW8 1703 aa24.54■■□□□ 1.52
CCDC136-215ENST00000528772 BICRAQ9NZM4 1560 aa24.46■■□□□ 1.51
CCDC136-215ENST00000528772 DNAJC5BQ9UF47 199 aa24.36■■□□□ 1.49
CCDC136-215ENST00000528772 SCRIBQ14160 1630 aa24.28■■□□□ 1.48
CCDC136-215ENST00000528772 SHROOM4Q9ULL8 1493 aa24.14■■□□□ 1.46
CCDC136-215ENST00000528772 EIF4G1Q04637 1599 aaKnown RBP23.79■■□□□ 1.4
CCDC136-215ENST00000528772 CC2D2AQ9P2K1 1620 aa23.73■■□□□ 1.39
CCDC136-215ENST00000528772 CECR2Q9BXF3 1484 aa23.62■■□□□ 1.37
CCDC136-215ENST00000528772 NCAPD3P42695 1498 aa23.22■■□□□ 1.31
CCDC136-215ENST00000528772 SMARCA4P51532 1647 aa23.22■■□□□ 1.31
CCDC136-215ENST00000528772 ATAD2BQ9ULI0 1458 aa23.18■■□□□ 1.3
CCDC136-215ENST00000528772 BAZ1AQ9NRL2 1556 aaPredicted RBP23.18■■□□□ 1.3
CCDC136-215ENST00000528772 SMARCA2P51531 1590 aa23.1■■□□□ 1.29
CCDC136-215ENST00000528772 MROH2BQ7Z745 1585 aa23.07■■□□□ 1.28
CCDC136-215ENST00000528772 HMGXB3Q12766 1538 aa23.03■■□□□ 1.28
CCDC136-215ENST00000528772 PEG3Q9GZU2 1588 aa23.02■■□□□ 1.28
CCDC136-215ENST00000528772 BAZ1BQ9UIG0 1483 aaKnown RBP22.94■■□□□ 1.26
CCDC136-215ENST00000528772 WIZO95785 1651 aa22.77■■□□□ 1.24
CCDC136-215ENST00000528772 RSF1Q96T23 1441 aaPredicted RBP22.76■■□□□ 1.23
CCDC136-215ENST00000528772 NESP48681 1621 aa22.69■■□□□ 1.22
CCDC136-215ENST00000528772 ERCC6Q03468 1493 aa22.6■■□□□ 1.21
CCDC136-215ENST00000528772 LAMC3Q9Y6N6 1575 aa22.57■■□□□ 1.2
CCDC136-215ENST00000528772 CADPSQ9ULU8 1353 aa22.52■■□□□ 1.2
CCDC136-215ENST00000528772 TOP2AP11388 1531 aaKnown RBP22.52■■□□□ 1.19
CCDC136-215ENST00000528772 CUX2O14529 1486 aa22.47■■□□□ 1.19
CCDC136-215ENST00000528772 PDS5BQ9NTI5 1447 aa22.44■■□□□ 1.18
CCDC136-215ENST00000528772 CFTRP13569 1480 aa22.35■■□□□ 1.17
CCDC136-215ENST00000528772 THOC2Q8NI27 1593 aaKnown RBP22.34■■□□□ 1.17
CCDC136-215ENST00000528772 KIF21AQ7Z4S6 1674 aa22.34■■□□□ 1.17
CCDC136-215ENST00000528772 CCDC88BA6NC98 1476 aa22.29■■□□□ 1.16
CCDC136-215ENST00000528772 FANCD2Q9BXW9 1451 aa22.23■■□□□ 1.15
CCDC136-215ENST00000528772 MRC2Q9UBG0 1479 aa22.22■■□□□ 1.15
CCDC136-215ENST00000528772 CEP164Q9UPV0 1460 aa22.2■■□□□ 1.14
CCDC136-215ENST00000528772 WDR62O43379 1518 aa22.15■■□□□ 1.14
CCDC136-215ENST00000528772 DNAJC5Q9H3Z4 198 aa22.05■■□□□ 1.12
CCDC136-215ENST00000528772 URB2Q14146 1524 aaKnown RBP22.04■■□□□ 1.12
CCDC136-215ENST00000528772 PRDM2Q13029 1718 aa22.03■■□□□ 1.12
CCDC136-215ENST00000528772 SUPT5HO00267 1087 aaKnown RBP22.02■■□□□ 1.12
CCDC136-215ENST00000528772 TOPBP1Q92547 1522 aa21.86■■□□□ 1.09
CCDC136-215ENST00000528772 ABCC8Q09428 1581 aa21.83■■□□□ 1.09
CCDC136-215ENST00000528772 DNMBPQ6XZF7 1577 aa21.79■■□□□ 1.08
CCDC136-215ENST00000528772 IFT140Q96RY7 1462 aa21.76■■□□□ 1.07
CCDC136-215ENST00000528772 ZNF608Q9ULD9 1512 aaPredicted RBP21.7■■□□□ 1.07
CCDC136-215ENST00000528772 POLA1P09884 1462 aaPredicted RBP21.67■■□□□ 1.06
CCDC136-215ENST00000528772 CUX1P39880 1505 aa21.65■■□□□ 1.06
CCDC136-215ENST00000528772 TARBP1Q13395 1621 aaKnown RBP21.63■■□□□ 1.05
CCDC136-215ENST00000528772 SOGA1O94964 1423 aa21.59■■□□□ 1.05
CCDC136-215ENST00000528772 FGD5Q6ZNL6 1462 aa21.58■■□□□ 1.05
CCDC136-215ENST00000528772 RAD54L2Q9Y4B4 1467 aa21.58■■□□□ 1.05
CCDC136-215ENST00000528772 AQRO60306 1485 aaKnown RBP eCLIP21.56■■□□□ 1.044e-6■■□□□ 12.8
CCDC136-215ENST00000528772 EIF4G3O43432 1585 aaKnown RBP21.55■■□□□ 1.04
CCDC136-215ENST00000528772 OSCARQ8IYS5 282 aa21.54■■□□□ 1.04
CCDC136-215ENST00000528772 TDRD9Q8NDG6 1382 aaKnown RBP21.5■■□□□ 1.03
CCDC136-215ENST00000528772 WRNQ14191 1432 aaPredicted RBP eCLIP21.43■■□□□ 1.02
CCDC136-215ENST00000528772 WDR97A6NE52 1622 aa21.41■■□□□ 1.02
CCDC136-215ENST00000528772 TOP2BQ02880 1626 aa21.38■■□□□ 1.01
CCDC136-215ENST00000528772 SYNJ1O43426 1573 aa21.37■■□□□ 1.01
CCDC136-215ENST00000528772 ABCA10Q8WWZ4 1543 aa21.37■■□□□ 1.01
CCDC136-215ENST00000528772 BIVM-ERCC5R4GMW8 1640 aa21.37■■□□□ 1.01
CCDC136-215ENST00000528772 GRIN2BQ13224 1484 aa21.33■■□□□ 1.01
CCDC136-215ENST00000528772 SNAPC4Q5SXM2 1469 aa21.32■■□□□ 1
CCDC136-215ENST00000528772 GAPVD1Q14C86 1478 aa21.32■■□□□ 1
CCDC136-215ENST00000528772 FBLN2P98095 1184 aa21.3■■□□□ 1
CCDC136-215ENST00000528772 MAGI1Q96QZ7 1491 aaPredicted RBP21.29■■□□□ 1
CCDC136-215ENST00000528772 CHD1O14646 1710 aa21.28■■□□□ 1
CCDC136-215ENST00000528772 ABCA5Q8WWZ7 1642 aa21.27■■□□□ 1
CCDC136-215ENST00000528772 CHMP7Q8WUX9 453 aaPredicted RBP21.23■□□□□ 0.99
CCDC136-215ENST00000528772 SYNJ2O15056 1496 aa21.22■□□□□ 0.99
CCDC136-215ENST00000528772 PBRM1Q86U86 1689 aa21.21■□□□□ 0.99
CCDC136-215ENST00000528772 TRIM41Q8WV44 630 aa21.18■□□□□ 0.98
CCDC136-215ENST00000528772 ARHGEF11O15085 1522 aa21.16■□□□□ 0.98
CCDC136-215ENST00000528772 RIMBP3CA6NJZ7 1639 aa21.15■□□□□ 0.98
CCDC136-215ENST00000528772 RIMBP3BA6NNM3 1639 aa21.15■□□□□ 0.98
CCDC136-215ENST00000528772 RIMBP3Q9UFD9 1639 aa21.15■□□□□ 0.98
CCDC136-215ENST00000528772 CLASP1Q7Z460 1538 aa21.12■□□□□ 0.97
CCDC136-215ENST00000528772 ERICH3Q5RHP9 1530 aa21.09■□□□□ 0.97
CCDC136-215ENST00000528772 ADAMTS12P58397 1594 aa21.07■□□□□ 0.96
CCDC136-215ENST00000528772 FHAD1B1AJZ9 1412 aa21.07■□□□□ 0.96
CCDC136-215ENST00000528772 GRIN2AQ12879 1464 aa21.06■□□□□ 0.96
CCDC136-215ENST00000528772 CYB5RLQ6IPT4 315 aa21■□□□□ 0.95
CCDC136-215ENST00000528772 NUP160Q12769 1436 aa21■□□□□ 0.95
CCDC136-215ENST00000528772 ARAP1Q96P48 1450 aa21■□□□□ 0.95
CCDC136-215ENST00000528772 IGF1RP08069 1367 aa20.98■□□□□ 0.95
CCDC136-215ENST00000528772 KIF27Q86VH2 1401 aa20.98■□□□□ 0.95
CCDC136-215ENST00000528772 CEP170Q5SW79 1584 aa20.96■□□□□ 0.95
CCDC136-215ENST00000528772 SHROOM2Q13796 1616 aa20.83■□□□□ 0.93
CCDC136-215ENST00000528772 CUL7Q14999 1698 aa20.83■□□□□ 0.92
CCDC136-215ENST00000528772 ERCC6L2Q5T890 1561 aa20.82■□□□□ 0.92
CCDC136-215ENST00000528772 CARMIL1Q5VZK9 1371 aa20.82■□□□□ 0.92
CCDC136-215ENST00000528772 JPH4Q96JJ6 628 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms