RNA–Protein interactions for RNA: ENST00000528732.1

MVB12A-207, Transcript of multivesicular body subunit 12A, humanhuman

TSL 2

Gene MVB12A, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12A-207ENST00000528732 NISCHQ9Y2I1 1504 aa45.45■■■■■ 4.87
MVB12A-207ENST00000528732 CCDC180Q9P1Z9 1646 aa40.31■■■■■ 4.04
MVB12A-207ENST00000528732 ABCC9O60706 1549 aa39.47■■■■□ 3.91
MVB12A-207ENST00000528732 DCAF8L2P0C7V8 631 aa38.03■■■■□ 3.68
MVB12A-207ENST00000528732 RB1CC1Q8TDY2 1594 aa37.9■■■■□ 3.66
MVB12A-207ENST00000528732 NACADO15069 1562 aa37.88■■■■□ 3.65
MVB12A-207ENST00000528732 ZCCHC6Q5VYS8 1495 aaKnown RBP37.85■■■■□ 3.65
MVB12A-207ENST00000528732 MYO15BQ96JP2 1530 aa37.63■■■■□ 3.61
MVB12A-207ENST00000528732 DCAF1Q9Y4B6 1507 aa37.53■■■■□ 3.6
MVB12A-207ENST00000528732 UNC13AQ9UPW8 1703 aa37.19■■■■□ 3.54
MVB12A-207ENST00000528732 PABPN1Q86U42 306 aaKnown RBP eCLIP36.96■■■■□ 3.51
MVB12A-207ENST00000528732 SCRIBQ14160 1630 aa36.88■■■■□ 3.49
MVB12A-207ENST00000528732 BICRAQ9NZM4 1560 aa36.87■■■■□ 3.49
MVB12A-207ENST00000528732 DNAJC5BQ9UF47 199 aa36.28■■■■□ 3.4
MVB12A-207ENST00000528732 SHROOM4Q9ULL8 1493 aa36.26■■■■□ 3.4
MVB12A-207ENST00000528732 EIF4G1Q04637 1599 aaKnown RBP35.83■■■■□ 3.33
MVB12A-207ENST00000528732 CC2D2AQ9P2K1 1620 aa35.69■■■■□ 3.3
MVB12A-207ENST00000528732 CECR2Q9BXF3 1484 aa35.48■■■■□ 3.27
MVB12A-207ENST00000528732 SMARCA4P51532 1647 aa35.24■■■■□ 3.23
MVB12A-207ENST00000528732 BAZ1AQ9NRL2 1556 aaPredicted RBP35.17■■■■□ 3.22
MVB12A-207ENST00000528732 MROH2BQ7Z745 1585 aa35.08■■■■□ 3.21
MVB12A-207ENST00000528732 ATAD2BQ9ULI0 1458 aa35.04■■■■□ 3.2
MVB12A-207ENST00000528732 NCAPD3P42695 1498 aa34.98■■■■□ 3.19
MVB12A-207ENST00000528732 SMARCA2P51531 1590 aa34.93■■■■□ 3.18
MVB12A-207ENST00000528732 PEG3Q9GZU2 1588 aa34.86■■■■□ 3.17
MVB12A-207ENST00000528732 HMGXB3Q12766 1538 aa34.77■■■■□ 3.16
MVB12A-207ENST00000528732 WIZO95785 1651 aa34.73■■■■□ 3.15
MVB12A-207ENST00000528732 BAZ1BQ9UIG0 1483 aaKnown RBP34.72■■■■□ 3.15
MVB12A-207ENST00000528732 RSF1Q96T23 1441 aaPredicted RBP34.69■■■■□ 3.14
MVB12A-207ENST00000528732 TOP2AP11388 1531 aaKnown RBP34.26■■■■□ 3.08
MVB12A-207ENST00000528732 NESP48681 1621 aa34.22■■■■□ 3.07
MVB12A-207ENST00000528732 LAMC3Q9Y6N6 1575 aa34.02■■■■□ 3.04
MVB12A-207ENST00000528732 CADPSQ9ULU8 1353 aa33.98■■■■□ 3.03
MVB12A-207ENST00000528732 SUPT5HO00267 1087 aaKnown RBP33.94■■■■□ 3.02
MVB12A-207ENST00000528732 CCDC88BA6NC98 1476 aa33.94■■■■□ 3.02
MVB12A-207ENST00000528732 ERCC6Q03468 1493 aa33.93■■■■□ 3.02
MVB12A-207ENST00000528732 KIF21AQ7Z4S6 1674 aa33.79■■■■□ 3
MVB12A-207ENST00000528732 CFTRP13569 1480 aa33.78■■■■□ 3
MVB12A-207ENST00000528732 PDS5BQ9NTI5 1447 aa33.78■■■■□ 3
MVB12A-207ENST00000528732 THOC2Q8NI27 1593 aaKnown RBP33.6■■■□□ 2.97
MVB12A-207ENST00000528732 FANCD2Q9BXW9 1451 aa33.58■■■□□ 2.97
MVB12A-207ENST00000528732 PRDM2Q13029 1718 aa33.54■■■□□ 2.96
MVB12A-207ENST00000528732 CUX2O14529 1486 aa33.5■■■□□ 2.95
MVB12A-207ENST00000528732 CEP164Q9UPV0 1460 aa33.5■■■□□ 2.95
MVB12A-207ENST00000528732 MRC2Q9UBG0 1479 aa33.45■■■□□ 2.95
MVB12A-207ENST00000528732 WDR62O43379 1518 aa33.33■■■□□ 2.93
MVB12A-207ENST00000528732 URB2Q14146 1524 aaKnown RBP33.29■■■□□ 2.92
MVB12A-207ENST00000528732 TOPBP1Q92547 1522 aa33.07■■■□□ 2.89
MVB12A-207ENST00000528732 DNMBPQ6XZF7 1577 aa33.01■■■□□ 2.88
MVB12A-207ENST00000528732 ABCC8Q09428 1581 aa32.99■■■□□ 2.87
MVB12A-207ENST00000528732 CUX1P39880 1505 aa32.89■■■□□ 2.86
MVB12A-207ENST00000528732 POLA1P09884 1462 aaPredicted RBP32.8■■■□□ 2.84
MVB12A-207ENST00000528732 IFT140Q96RY7 1462 aa32.8■■■□□ 2.84
MVB12A-207ENST00000528732 ZNF608Q9ULD9 1512 aaPredicted RBP32.75■■■□□ 2.83
MVB12A-207ENST00000528732 FGD5Q6ZNL6 1462 aa32.74■■■□□ 2.83
MVB12A-207ENST00000528732 RAD54L2Q9Y4B4 1467 aa32.73■■■□□ 2.83
MVB12A-207ENST00000528732 TARBP1Q13395 1621 aaKnown RBP32.73■■■□□ 2.83
MVB12A-207ENST00000528732 SOGA1O94964 1423 aa32.68■■■□□ 2.82
MVB12A-207ENST00000528732 WRNQ14191 1432 aaPredicted RBP eCLIP32.66■■■□□ 2.82
MVB12A-207ENST00000528732 SYNJ1O43426 1573 aa32.63■■■□□ 2.81
MVB12A-207ENST00000528732 BIVM-ERCC5R4GMW8 1640 aa32.59■■■□□ 2.81
MVB12A-207ENST00000528732 TOP2BQ02880 1626 aa32.59■■■□□ 2.81
MVB12A-207ENST00000528732 AQRO60306 1485 aaKnown RBP eCLIP32.57■■■□□ 2.8
MVB12A-207ENST00000528732 EIF4G3O43432 1585 aaKnown RBP32.55■■■□□ 2.8
MVB12A-207ENST00000528732 TDRD9Q8NDG6 1382 aaKnown RBP32.52■■■□□ 2.8
MVB12A-207ENST00000528732 DNAJC5Q9H3Z4 198 aa32.49■■■□□ 2.79
MVB12A-207ENST00000528732 WDR97A6NE52 1622 aa32.47■■■□□ 2.79
MVB12A-207ENST00000528732 ABCA10Q8WWZ4 1543 aa32.4■■■□□ 2.78
MVB12A-207ENST00000528732 GAPVD1Q14C86 1478 aa32.28■■■□□ 2.76
MVB12A-207ENST00000528732 ABCA5Q8WWZ7 1642 aa32.27■■■□□ 2.76
MVB12A-207ENST00000528732 GRIN2BQ13224 1484 aa32.23■■■□□ 2.75
MVB12A-207ENST00000528732 PBRM1Q86U86 1689 aa32.23■■■□□ 2.75
MVB12A-207ENST00000528732 SNAPC4Q5SXM2 1469 aa32.23■■■□□ 2.75
MVB12A-207ENST00000528732 OSCARQ8IYS5 282 aa32.21■■■□□ 2.75
MVB12A-207ENST00000528732 CHD1O14646 1710 aa32.18■■■□□ 2.74
MVB12A-207ENST00000528732 FBLN2P98095 1184 aa32.15■■■□□ 2.74
MVB12A-207ENST00000528732 MAGI1Q96QZ7 1491 aaPredicted RBP32.12■■■□□ 2.73
MVB12A-207ENST00000528732 CHMP7Q8WUX9 453 aaPredicted RBP32.04■■■□□ 2.72
MVB12A-207ENST00000528732 SYNJ2O15056 1496 aa32.02■■■□□ 2.72
MVB12A-207ENST00000528732 TRIM41Q8WV44 630 aa31.99■■■□□ 2.71
MVB12A-207ENST00000528732 ERICH3Q5RHP9 1530 aa31.99■■■□□ 2.71
MVB12A-207ENST00000528732 ADAMTS12P58397 1594 aa31.94■■■□□ 2.7
MVB12A-207ENST00000528732 KIF27Q86VH2 1401 aa31.94■■■□□ 2.7
MVB12A-207ENST00000528732 IGF1RP08069 1367 aa31.89■■■□□ 2.7
MVB12A-207ENST00000528732 FHAD1B1AJZ9 1412 aa31.89■■■□□ 2.7
MVB12A-207ENST00000528732 RUSC2Q8N2Y8 1516 aa31.85■■■□□ 2.69
MVB12A-207ENST00000528732 GRIN2AQ12879 1464 aa31.84■■■□□ 2.69
MVB12A-207ENST00000528732 CLASP1Q7Z460 1538 aa31.79■■■□□ 2.68
MVB12A-207ENST00000528732 CHIC1Q5VXU3 224 aa31.73■■■□□ 2.67
MVB12A-207ENST00000528732 CEP170Q5SW79 1584 aa31.73■■■□□ 2.67
MVB12A-207ENST00000528732 RIMBP3CA6NJZ7 1639 aa31.71■■■□□ 2.67
MVB12A-207ENST00000528732 RIMBP3BA6NNM3 1639 aa31.71■■■□□ 2.67
MVB12A-207ENST00000528732 RIMBP3Q9UFD9 1639 aa31.71■■■□□ 2.67
MVB12A-207ENST00000528732 CUL7Q14999 1698 aa31.7■■■□□ 2.67
MVB12A-207ENST00000528732 NUP160Q12769 1436 aa31.69■■■□□ 2.66
MVB12A-207ENST00000528732 ARHGEF11O15085 1522 aa31.68■■■□□ 2.66
MVB12A-207ENST00000528732 CARMIL1Q5VZK9 1371 aa31.68■■■□□ 2.66
MVB12A-207ENST00000528732 RAPGEF2Q9Y4G8 1499 aa31.46■■■□□ 2.63
MVB12A-207ENST00000528732 ERCC6L2Q5T890 1561 aa31.46■■■□□ 2.63
MVB12A-207ENST00000528732 ARAP1Q96P48 1450 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms