RNA–Protein interactions for RNA: ENST00000528633.1

PAK1-212, Transcript of p21 (RAC1) activated kinase 1, humanhuman

TSL 3

Gene PAK1, Length 450 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAK1-212ENST00000528633 NISCHQ9Y2I1 1504 aa45.54■■■■■ 4.88
PAK1-212ENST00000528633 CCDC180Q9P1Z9 1646 aa40.62■■■■■ 4.09
PAK1-212ENST00000528633 ABCC9O60706 1549 aa40.37■■■■■ 4.05
PAK1-212ENST00000528633 RB1CC1Q8TDY2 1594 aa38.59■■■■□ 3.77
PAK1-212ENST00000528633 NACADO15069 1562 aa38.44■■■■□ 3.74
PAK1-212ENST00000528633 DCAF8L2P0C7V8 631 aa38.37■■■■□ 3.73
PAK1-212ENST00000528633 MYO15BQ96JP2 1530 aa38.09■■■■□ 3.69
PAK1-212ENST00000528633 ZCCHC6Q5VYS8 1495 aaKnown RBP37.79■■■■□ 3.64
PAK1-212ENST00000528633 PABPN1Q86U42 306 aaKnown RBP eCLIP37.7■■■■□ 3.63
PAK1-212ENST00000528633 DCAF1Q9Y4B6 1507 aa37.7■■■■□ 3.63
PAK1-212ENST00000528633 DNAJC5BQ9UF47 199 aa37.63■■■■□ 3.61
PAK1-212ENST00000528633 UNC13AQ9UPW8 1703 aa37.45■■■■□ 3.59
PAK1-212ENST00000528633 BICRAQ9NZM4 1560 aa37.38■■■■□ 3.57
PAK1-212ENST00000528633 SHROOM4Q9ULL8 1493 aa37.08■■■■□ 3.53
PAK1-212ENST00000528633 SCRIBQ14160 1630 aa37■■■■□ 3.51
PAK1-212ENST00000528633 EIF4G1Q04637 1599 aaKnown RBP36.48■■■■□ 3.43
PAK1-212ENST00000528633 CC2D2AQ9P2K1 1620 aa36.44■■■■□ 3.42
PAK1-212ENST00000528633 CECR2Q9BXF3 1484 aa36.37■■■■□ 3.41
PAK1-212ENST00000528633 NCAPD3P42695 1498 aa35.54■■■■□ 3.28
PAK1-212ENST00000528633 ATAD2BQ9ULI0 1458 aa35.43■■■■□ 3.26
PAK1-212ENST00000528633 SMARCA4P51532 1647 aa35.38■■■■□ 3.25
PAK1-212ENST00000528633 SMARCA2P51531 1590 aa35.34■■■■□ 3.25
PAK1-212ENST00000528633 BAZ1AQ9NRL2 1556 aaPredicted RBP35.34■■■■□ 3.25
PAK1-212ENST00000528633 HMGXB3Q12766 1538 aa35.23■■■■□ 3.23
PAK1-212ENST00000528633 PEG3Q9GZU2 1588 aa35.1■■■■□ 3.21
PAK1-212ENST00000528633 BAZ1BQ9UIG0 1483 aaKnown RBP35.09■■■■□ 3.21
PAK1-212ENST00000528633 MROH2BQ7Z745 1585 aa35.04■■■■□ 3.2
PAK1-212ENST00000528633 ERCC6Q03468 1493 aa34.88■■■■□ 3.17
PAK1-212ENST00000528633 CUX2O14529 1486 aa34.74■■■■□ 3.15
PAK1-212ENST00000528633 NESP48681 1621 aa34.73■■■■□ 3.15
PAK1-212ENST00000528633 LAMC3Q9Y6N6 1575 aa34.61■■■■□ 3.13
PAK1-212ENST00000528633 WIZO95785 1651 aa34.55■■■■□ 3.12
PAK1-212ENST00000528633 RSF1Q96T23 1441 aaPredicted RBP34.52■■■■□ 3.12
PAK1-212ENST00000528633 PDS5BQ9NTI5 1447 aa34.5■■■■□ 3.11
PAK1-212ENST00000528633 CADPSQ9ULU8 1353 aa34.49■■■■□ 3.11
PAK1-212ENST00000528633 DNAJC5Q9H3Z4 198 aa34.41■■■■□ 3.1
PAK1-212ENST00000528633 THOC2Q8NI27 1593 aaKnown RBP34.28■■■■□ 3.08
PAK1-212ENST00000528633 TOP2AP11388 1531 aaKnown RBP34.24■■■■□ 3.07
PAK1-212ENST00000528633 KIF21AQ7Z4S6 1674 aa34.17■■■■□ 3.06
PAK1-212ENST00000528633 CFTRP13569 1480 aa34.13■■■■□ 3.05
PAK1-212ENST00000528633 MRC2Q9UBG0 1479 aa34.1■■■■□ 3.05
PAK1-212ENST00000528633 FANCD2Q9BXW9 1451 aa34.03■■■■□ 3.04
PAK1-212ENST00000528633 CEP164Q9UPV0 1460 aa34.03■■■■□ 3.04
PAK1-212ENST00000528633 WDR62O43379 1518 aa33.97■■■■□ 3.03
PAK1-212ENST00000528633 CCDC88BA6NC98 1476 aa33.89■■■■□ 3.02
PAK1-212ENST00000528633 URB2Q14146 1524 aaKnown RBP33.68■■■□□ 2.98
PAK1-212ENST00000528633 PRDM2Q13029 1718 aa33.53■■■□□ 2.96
PAK1-212ENST00000528633 ABCC8Q09428 1581 aa33.45■■■□□ 2.95
PAK1-212ENST00000528633 TOPBP1Q92547 1522 aa33.39■■■□□ 2.94
PAK1-212ENST00000528633 IFT140Q96RY7 1462 aa33.38■■■□□ 2.93
PAK1-212ENST00000528633 OSCARQ8IYS5 282 aa33.3■■■□□ 2.92
PAK1-212ENST00000528633 DNMBPQ6XZF7 1577 aa33.28■■■□□ 2.92
PAK1-212ENST00000528633 SUPT5HO00267 1087 aaKnown RBP33.24■■■□□ 2.91
PAK1-212ENST00000528633 ZNF608Q9ULD9 1512 aaPredicted RBP33.21■■■□□ 2.91
PAK1-212ENST00000528633 POLA1P09884 1462 aaPredicted RBP33.08■■■□□ 2.89
PAK1-212ENST00000528633 TARBP1Q13395 1621 aaKnown RBP33.02■■■□□ 2.88
PAK1-212ENST00000528633 SOGA1O94964 1423 aa33.01■■■□□ 2.87
PAK1-212ENST00000528633 AQRO60306 1485 aaKnown RBP eCLIP32.99■■■□□ 2.87
PAK1-212ENST00000528633 EIF4G3O43432 1585 aaKnown RBP32.97■■■□□ 2.87
PAK1-212ENST00000528633 TRIM41Q8WV44 630 aa32.95■■■□□ 2.87
PAK1-212ENST00000528633 RAD54L2Q9Y4B4 1467 aa32.93■■■□□ 2.86
PAK1-212ENST00000528633 FGD5Q6ZNL6 1462 aa32.91■■■□□ 2.86
PAK1-212ENST00000528633 CUX1P39880 1505 aa32.9■■■□□ 2.86
PAK1-212ENST00000528633 TDRD9Q8NDG6 1382 aaKnown RBP32.87■■■□□ 2.85
PAK1-212ENST00000528633 WDR97A6NE52 1622 aa32.78■■■□□ 2.84
PAK1-212ENST00000528633 FBLN2P98095 1184 aa32.77■■■□□ 2.84
PAK1-212ENST00000528633 GRIN2BQ13224 1484 aa32.67■■■□□ 2.82
PAK1-212ENST00000528633 SNAPC4Q5SXM2 1469 aa32.63■■■□□ 2.81
PAK1-212ENST00000528633 CHMP7Q8WUX9 453 aaPredicted RBP32.63■■■□□ 2.81
PAK1-212ENST00000528633 MAGI1Q96QZ7 1491 aaPredicted RBP32.62■■■□□ 2.81
PAK1-212ENST00000528633 ARHGEF11O15085 1522 aa32.61■■■□□ 2.81
PAK1-212ENST00000528633 ABCA10Q8WWZ4 1543 aa32.61■■■□□ 2.81
PAK1-212ENST00000528633 RIMBP3CA6NJZ7 1639 aa32.59■■■□□ 2.81
PAK1-212ENST00000528633 RIMBP3BA6NNM3 1639 aa32.59■■■□□ 2.81
PAK1-212ENST00000528633 RIMBP3Q9UFD9 1639 aa32.59■■■□□ 2.81
PAK1-212ENST00000528633 WRNQ14191 1432 aaPredicted RBP eCLIP32.59■■■□□ 2.81
PAK1-212ENST00000528633 GAPVD1Q14C86 1478 aa32.58■■■□□ 2.81
PAK1-212ENST00000528633 CHD1O14646 1710 aa32.57■■■□□ 2.81
PAK1-212ENST00000528633 SYNJ2O15056 1496 aa32.5■■■□□ 2.79
PAK1-212ENST00000528633 TOP2BQ02880 1626 aa32.47■■■□□ 2.79
PAK1-212ENST00000528633 CYB5RLQ6IPT4 315 aa32.44■■■□□ 2.78
PAK1-212ENST00000528633 BIVM-ERCC5R4GMW8 1640 aa32.41■■■□□ 2.78
PAK1-212ENST00000528633 ABCA5Q8WWZ7 1642 aa32.4■■■□□ 2.78
PAK1-212ENST00000528633 SYNJ1O43426 1573 aa32.4■■■□□ 2.78
PAK1-212ENST00000528633 CLASP1Q7Z460 1538 aa32.36■■■□□ 2.77
PAK1-212ENST00000528633 PBRM1Q86U86 1689 aa32.33■■■□□ 2.77
PAK1-212ENST00000528633 ARAP1Q96P48 1450 aa32.3■■■□□ 2.76
PAK1-212ENST00000528633 FHAD1B1AJZ9 1412 aa32.22■■■□□ 2.75
PAK1-212ENST00000528633 GRIN2AQ12879 1464 aa32.21■■■□□ 2.75
PAK1-212ENST00000528633 ERICH3Q5RHP9 1530 aa32.19■■■□□ 2.74
PAK1-212ENST00000528633 ADAMTS12P58397 1594 aa32.15■■■□□ 2.74
PAK1-212ENST00000528633 NUP160Q12769 1436 aa32.12■■■□□ 2.73
PAK1-212ENST00000528633 CEP170Q5SW79 1584 aa31.99■■■□□ 2.71
PAK1-212ENST00000528633 TRHP20396 242 aaPredicted RBP31.97■■■□□ 2.71
PAK1-212ENST00000528633 KIF27Q86VH2 1401 aa31.96■■■□□ 2.71
PAK1-212ENST00000528633 IGF1RP08069 1367 aa31.93■■■□□ 2.7
PAK1-212ENST00000528633 JPH4Q96JJ6 628 aa31.87■■■□□ 2.69
PAK1-212ENST00000528633 SHROOM2Q13796 1616 aa31.82■■■□□ 2.69
PAK1-212ENST00000528633 ERCC6L2Q5T890 1561 aa31.81■■■□□ 2.68
PAK1-212ENST00000528633 PRG4Q92954 1404 aaPredicted RBP31.79■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms