RNA–Protein interactions for RNA: ENST00000528588.5

VPS51-206, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-206ENST00000528588 NISCHQ9Y2I1 1504 aa50.2■■■■■ 5.63
VPS51-206ENST00000528588 ABCC9O60706 1549 aa45.67■■■■■ 4.9
VPS51-206ENST00000528588 CCDC180Q9P1Z9 1646 aa45.27■■■■■ 4.84
VPS51-206ENST00000528588 RB1CC1Q8TDY2 1594 aa43.29■■■■■ 4.52
VPS51-206ENST00000528588 DNAJC5BQ9UF47 199 aa43.21■■■■■ 4.51
VPS51-206ENST00000528588 NACADO15069 1562 aa42.88■■■■■ 4.45
VPS51-206ENST00000528588 DCAF8L2P0C7V8 631 aa42.56■■■■■ 4.4
VPS51-206ENST00000528588 PABPN1Q86U42 306 aaKnown RBP eCLIP42.44■■■■■ 4.38
VPS51-206ENST00000528588 UNC13AQ9UPW8 1703 aa42.37■■■■■ 4.37
VPS51-206ENST00000528588 MYO15BQ96JP2 1530 aa42.12■■■■■ 4.33
VPS51-206ENST00000528588 BICRAQ9NZM4 1560 aa42.04■■■■■ 4.32
VPS51-206ENST00000528588 ZCCHC6Q5VYS8 1495 aaKnown RBP41.5■■■■■ 4.23
VPS51-206ENST00000528588 DCAF1Q9Y4B6 1507 aa41.42■■■■■ 4.22
VPS51-206ENST00000528588 SHROOM4Q9ULL8 1493 aa41.41■■■■■ 4.22
VPS51-206ENST00000528588 CC2D2AQ9P2K1 1620 aa41.26■■■■■ 4.19
VPS51-206ENST00000528588 SCRIBQ14160 1630 aa41.23■■■■■ 4.19
VPS51-206ENST00000528588 CECR2Q9BXF3 1484 aa41.19■■■■■ 4.18
VPS51-206ENST00000528588 EIF4G1Q04637 1599 aaKnown RBP41.05■■■■■ 4.16
VPS51-206ENST00000528588 DNAJC5Q9H3Z4 198 aa40■■■■□ 3.99
VPS51-206ENST00000528588 NCAPD3P42695 1498 aa39.56■■■■□ 3.92
VPS51-206ENST00000528588 CUX2O14529 1486 aa39.54■■■■□ 3.92
VPS51-206ENST00000528588 ERCC6Q03468 1493 aa39.48■■■■□ 3.91
VPS51-206ENST00000528588 ATAD2BQ9ULI0 1458 aa39.39■■■■□ 3.9
VPS51-206ENST00000528588 SMARCA2P51531 1590 aa39.28■■■■□ 3.88
VPS51-206ENST00000528588 SMARCA4P51532 1647 aa39.27■■■■□ 3.88
VPS51-206ENST00000528588 HMGXB3Q12766 1538 aa39.25■■■■□ 3.87
VPS51-206ENST00000528588 NESP48681 1621 aa39.11■■■■□ 3.85
VPS51-206ENST00000528588 BAZ1AQ9NRL2 1556 aaPredicted RBP39■■■■□ 3.83
VPS51-206ENST00000528588 BAZ1BQ9UIG0 1483 aaKnown RBP39■■■■□ 3.83
VPS51-206ENST00000528588 PEG3Q9GZU2 1588 aa38.87■■■■□ 3.81
VPS51-206ENST00000528588 THOC2Q8NI27 1593 aaKnown RBP38.82■■■■□ 3.8
VPS51-206ENST00000528588 LAMC3Q9Y6N6 1575 aa38.78■■■■□ 3.8
VPS51-206ENST00000528588 MROH2BQ7Z745 1585 aa38.68■■■■□ 3.78
VPS51-206ENST00000528588 KIF21AQ7Z4S6 1674 aa38.64■■■■□ 3.78
VPS51-206ENST00000528588 PDS5BQ9NTI5 1447 aa38.55■■■■□ 3.76
VPS51-206ENST00000528588 CADPSQ9ULU8 1353 aa38.34■■■■□ 3.73
VPS51-206ENST00000528588 MRC2Q9UBG0 1479 aa38.25■■■■□ 3.71
VPS51-206ENST00000528588 WIZO95785 1651 aa38.23■■■■□ 3.71
VPS51-206ENST00000528588 WDR62O43379 1518 aa38.17■■■■□ 3.7
VPS51-206ENST00000528588 TRIM41Q8WV44 630 aa38.09■■■■□ 3.69
VPS51-206ENST00000528588 CEP164Q9UPV0 1460 aa38.02■■■■□ 3.68
VPS51-206ENST00000528588 FANCD2Q9BXW9 1451 aa37.93■■■■□ 3.66
VPS51-206ENST00000528588 CFTRP13569 1480 aa37.82■■■■□ 3.64
VPS51-206ENST00000528588 RSF1Q96T23 1441 aaPredicted RBP37.7■■■■□ 3.62
VPS51-206ENST00000528588 TOP2AP11388 1531 aaKnown RBP37.69■■■■□ 3.62
VPS51-206ENST00000528588 OSCARQ8IYS5 282 aa37.65■■■■□ 3.62
VPS51-206ENST00000528588 URB2Q14146 1524 aaKnown RBP37.65■■■■□ 3.62
VPS51-206ENST00000528588 PRDM2Q13029 1718 aa37.49■■■■□ 3.59
VPS51-206ENST00000528588 IFT140Q96RY7 1462 aa37.26■■■■□ 3.56
VPS51-206ENST00000528588 ZNF608Q9ULD9 1512 aaPredicted RBP37.26■■■■□ 3.56
VPS51-206ENST00000528588 CCDC88BA6NC98 1476 aa37.26■■■■□ 3.55
VPS51-206ENST00000528588 RIMBP3CA6NJZ7 1639 aa37.25■■■■□ 3.55
VPS51-206ENST00000528588 RIMBP3BA6NNM3 1639 aa37.25■■■■□ 3.55
VPS51-206ENST00000528588 RIMBP3Q9UFD9 1639 aa37.25■■■■□ 3.55
VPS51-206ENST00000528588 TOPBP1Q92547 1522 aa37.17■■■■□ 3.54
VPS51-206ENST00000528588 ARHGEF11O15085 1522 aa37.07■■■■□ 3.53
VPS51-206ENST00000528588 EIF4G3O43432 1585 aaKnown RBP37.06■■■■□ 3.52
VPS51-206ENST00000528588 ABCC8Q09428 1581 aa37.05■■■■□ 3.52
VPS51-206ENST00000528588 DNMBPQ6XZF7 1577 aa37■■■■□ 3.51
VPS51-206ENST00000528588 CHD1O14646 1710 aa36.9■■■■□ 3.5
VPS51-206ENST00000528588 TARBP1Q13395 1621 aaKnown RBP36.88■■■■□ 3.49
VPS51-206ENST00000528588 AQRO60306 1485 aaKnown RBP eCLIP36.86■■■■□ 3.493e-7■■■■□ 21.2
VPS51-206ENST00000528588 CYB5RLQ6IPT4 315 aa36.81■■■■□ 3.48
VPS51-206ENST00000528588 POLA1P09884 1462 aaPredicted RBP36.75■■■■□ 3.47
VPS51-206ENST00000528588 FBLN2P98095 1184 aa36.71■■■■□ 3.47
VPS51-206ENST00000528588 ARAP1Q96P48 1450 aa36.67■■■■□ 3.46
VPS51-206ENST00000528588 RAD54L2Q9Y4B4 1467 aa36.63■■■■□ 3.45
VPS51-206ENST00000528588 SOGA1O94964 1423 aa36.58■■■■□ 3.45
VPS51-206ENST00000528588 TDRD9Q8NDG6 1382 aaKnown RBP36.56■■■■□ 3.44
VPS51-206ENST00000528588 TRHP20396 242 aaPredicted RBP36.56■■■■□ 3.44
VPS51-206ENST00000528588 SNAPC4Q5SXM2 1469 aa36.49■■■■□ 3.43
VPS51-206ENST00000528588 FGD5Q6ZNL6 1462 aa36.47■■■■□ 3.43
VPS51-206ENST00000528588 WDR97A6NE52 1622 aa36.47■■■■□ 3.43
VPS51-206ENST00000528588 CLASP1Q7Z460 1538 aa36.41■■■■□ 3.42
VPS51-206ENST00000528588 CUX1P39880 1505 aa36.37■■■■□ 3.41
VPS51-206ENST00000528588 MAGI1Q96QZ7 1491 aaPredicted RBP36.37■■■■□ 3.41
VPS51-206ENST00000528588 SYNJ1O43426 1573 aa36.36■■■■□ 3.41
VPS51-206ENST00000528588 CHMP7Q8WUX9 453 aaPredicted RBP36.36■■■■□ 3.41
VPS51-206ENST00000528588 GRIN2BQ13224 1484 aa36.31■■■■□ 3.4
VPS51-206ENST00000528588 SYNJ2O15056 1496 aa36.24■■■■□ 3.39
VPS51-206ENST00000528588 PBRM1Q86U86 1689 aa36.19■■■■□ 3.38
VPS51-206ENST00000528588 GAPVD1Q14C86 1478 aa36.12■■■■□ 3.37
VPS51-206ENST00000528588 ABCA5Q8WWZ7 1642 aa36.04■■■■□ 3.36
VPS51-206ENST00000528588 ABCA10Q8WWZ4 1543 aa36.02■■■■□ 3.36
VPS51-206ENST00000528588 GRIN2AQ12879 1464 aa35.85■■■■□ 3.33
VPS51-206ENST00000528588 ERCC6L2Q5T890 1561 aa35.82■■■■□ 3.32
VPS51-206ENST00000528588 AEBP2Q6ZN18 517 aaPredicted RBP35.81■■■■□ 3.32
VPS51-206ENST00000528588 ADAMTS12P58397 1594 aa35.8■■■■□ 3.32
VPS51-206ENST00000528588 WRNQ14191 1432 aaPredicted RBP eCLIP35.79■■■■□ 3.32
VPS51-206ENST00000528588 CEP170Q5SW79 1584 aa35.76■■■■□ 3.31
VPS51-206ENST00000528588 NUP160Q12769 1436 aa35.73■■■■□ 3.31
VPS51-206ENST00000528588 SUPT5HO00267 1087 aaKnown RBP35.72■■■■□ 3.31
VPS51-206ENST00000528588 BIVM-ERCC5R4GMW8 1640 aa35.69■■■■□ 3.3
VPS51-206ENST00000528588 TOP2BQ02880 1626 aa35.68■■■■□ 3.3
VPS51-206ENST00000528588 SHROOM2Q13796 1616 aa35.66■■■■□ 3.3
VPS51-206ENST00000528588 FHAD1B1AJZ9 1412 aa35.65■■■■□ 3.3
VPS51-206ENST00000528588 ERICH3Q5RHP9 1530 aa35.57■■■■□ 3.28
VPS51-206ENST00000528588 KIF13AQ9H1H9 1805 aa35.45■■■■□ 3.27
VPS51-206ENST00000528588 PRG4Q92954 1404 aaPredicted RBP35.44■■■■□ 3.26
VPS51-206ENST00000528588 JPH4Q96JJ6 628 aa35.36■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 183.2 ms