RNA–Protein interactions for RNA: ENST00000528536.1

SIGIRR-214, Transcript of single Ig and TIR domain containing, humanhuman

TSL 3

Gene SIGIRR, Length 366 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGIRR-214ENST00000528536 NISCHQ9Y2I1 1504 aa30.45■■■□□ 2.47
SIGIRR-214ENST00000528536 CCDC180Q9P1Z9 1646 aa27.26■■□□□ 1.95
SIGIRR-214ENST00000528536 ABCC9O60706 1549 aa26.85■■□□□ 1.89
SIGIRR-214ENST00000528536 RB1CC1Q8TDY2 1594 aa25.78■■□□□ 1.72
SIGIRR-214ENST00000528536 NACADO15069 1562 aa25.68■■□□□ 1.7
SIGIRR-214ENST00000528536 DCAF8L2P0C7V8 631 aa25.47■■□□□ 1.67
SIGIRR-214ENST00000528536 MYO15BQ96JP2 1530 aa25.46■■□□□ 1.67
SIGIRR-214ENST00000528536 ZCCHC6Q5VYS8 1495 aaKnown RBP25.32■■□□□ 1.64
SIGIRR-214ENST00000528536 DCAF1Q9Y4B6 1507 aa25.23■■□□□ 1.63
SIGIRR-214ENST00000528536 UNC13AQ9UPW8 1703 aa25.13■■□□□ 1.61
SIGIRR-214ENST00000528536 PABPN1Q86U42 306 aaKnown RBP eCLIP25■■□□□ 1.59
SIGIRR-214ENST00000528536 BICRAQ9NZM4 1560 aa24.96■■□□□ 1.59
SIGIRR-214ENST00000528536 DNAJC5BQ9UF47 199 aa24.84■■□□□ 1.57
SIGIRR-214ENST00000528536 SCRIBQ14160 1630 aa24.78■■□□□ 1.56
SIGIRR-214ENST00000528536 SHROOM4Q9ULL8 1493 aa24.77■■□□□ 1.56
SIGIRR-214ENST00000528536 EIF4G1Q04637 1599 aaKnown RBP24.35■■□□□ 1.49
SIGIRR-214ENST00000528536 CC2D2AQ9P2K1 1620 aa24.3■■□□□ 1.48
SIGIRR-214ENST00000528536 CECR2Q9BXF3 1484 aa24.19■■□□□ 1.46
SIGIRR-214ENST00000528536 SMARCA4P51532 1647 aa23.7■■□□□ 1.38
SIGIRR-214ENST00000528536 NCAPD3P42695 1498 aa23.68■■□□□ 1.38
SIGIRR-214ENST00000528536 BAZ1AQ9NRL2 1556 aaPredicted RBP23.65■■□□□ 1.38
SIGIRR-214ENST00000528536 ATAD2BQ9ULI0 1458 aa23.62■■□□□ 1.37
SIGIRR-214ENST00000528536 SMARCA2P51531 1590 aa23.62■■□□□ 1.37
SIGIRR-214ENST00000528536 HMGXB3Q12766 1538 aa23.55■■□□□ 1.36
SIGIRR-214ENST00000528536 PEG3Q9GZU2 1588 aa23.5■■□□□ 1.35
SIGIRR-214ENST00000528536 MROH2BQ7Z745 1585 aa23.43■■□□□ 1.34
SIGIRR-214ENST00000528536 BAZ1BQ9UIG0 1483 aaKnown RBP23.43■■□□□ 1.34
SIGIRR-214ENST00000528536 ERCC6Q03468 1493 aa23.2■■□□□ 1.3
SIGIRR-214ENST00000528536 WIZO95785 1651 aa23.16■■□□□ 1.3
SIGIRR-214ENST00000528536 NESP48681 1621 aa23.13■■□□□ 1.29
SIGIRR-214ENST00000528536 LAMC3Q9Y6N6 1575 aa23.13■■□□□ 1.29
SIGIRR-214ENST00000528536 CUX2O14529 1486 aa23.09■■□□□ 1.29
SIGIRR-214ENST00000528536 RSF1Q96T23 1441 aaPredicted RBP23.07■■□□□ 1.28
SIGIRR-214ENST00000528536 PDS5BQ9NTI5 1447 aa22.96■■□□□ 1.27
SIGIRR-214ENST00000528536 TOP2AP11388 1531 aaKnown RBP22.95■■□□□ 1.26
SIGIRR-214ENST00000528536 CADPSQ9ULU8 1353 aa22.95■■□□□ 1.26
SIGIRR-214ENST00000528536 THOC2Q8NI27 1593 aaKnown RBP22.91■■□□□ 1.26
SIGIRR-214ENST00000528536 KIF21AQ7Z4S6 1674 aa22.89■■□□□ 1.25
SIGIRR-214ENST00000528536 CFTRP13569 1480 aa22.77■■□□□ 1.24
SIGIRR-214ENST00000528536 MRC2Q9UBG0 1479 aa22.73■■□□□ 1.23
SIGIRR-214ENST00000528536 CEP164Q9UPV0 1460 aa22.71■■□□□ 1.23
SIGIRR-214ENST00000528536 FANCD2Q9BXW9 1451 aa22.69■■□□□ 1.22
SIGIRR-214ENST00000528536 WDR62O43379 1518 aa22.68■■□□□ 1.22
SIGIRR-214ENST00000528536 DNAJC5Q9H3Z4 198 aa22.66■■□□□ 1.22
SIGIRR-214ENST00000528536 CCDC88BA6NC98 1476 aa22.64■■□□□ 1.21
SIGIRR-214ENST00000528536 PRDM2Q13029 1718 aa22.6■■□□□ 1.21
SIGIRR-214ENST00000528536 URB2Q14146 1524 aaKnown RBP22.47■■□□□ 1.19
SIGIRR-214ENST00000528536 SUPT5HO00267 1087 aaKnown RBP22.35■■□□□ 1.17
SIGIRR-214ENST00000528536 ABCC8Q09428 1581 aa22.33■■□□□ 1.17
SIGIRR-214ENST00000528536 TOPBP1Q92547 1522 aa22.29■■□□□ 1.16
SIGIRR-214ENST00000528536 DNMBPQ6XZF7 1577 aa22.27■■□□□ 1.16
SIGIRR-214ENST00000528536 IFT140Q96RY7 1462 aa22.25■■□□□ 1.15
SIGIRR-214ENST00000528536 ZNF608Q9ULD9 1512 aaPredicted RBP22.12■■□□□ 1.13
SIGIRR-214ENST00000528536 POLA1P09884 1462 aaPredicted RBP22.09■■□□□ 1.13
SIGIRR-214ENST00000528536 TARBP1Q13395 1621 aaKnown RBP22.08■■□□□ 1.13
SIGIRR-214ENST00000528536 EIF4G3O43432 1585 aaKnown RBP22.08■■□□□ 1.12
SIGIRR-214ENST00000528536 OSCARQ8IYS5 282 aa22.04■■□□□ 1.12
SIGIRR-214ENST00000528536 CUX1P39880 1505 aa22.01■■□□□ 1.11
SIGIRR-214ENST00000528536 FGD5Q6ZNL6 1462 aa21.99■■□□□ 1.11
SIGIRR-214ENST00000528536 SOGA1O94964 1423 aa21.98■■□□□ 1.11
SIGIRR-214ENST00000528536 WDR97A6NE52 1622 aa21.97■■□□□ 1.11
SIGIRR-214ENST00000528536 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
SIGIRR-214ENST00000528536 AQRO60306 1485 aaKnown RBP eCLIP21.95■■□□□ 1.1
SIGIRR-214ENST00000528536 TDRD9Q8NDG6 1382 aaKnown RBP21.87■■□□□ 1.09
SIGIRR-214ENST00000528536 CHD1O14646 1710 aa21.82■■□□□ 1.08
SIGIRR-214ENST00000528536 GRIN2BQ13224 1484 aa21.79■■□□□ 1.08
SIGIRR-214ENST00000528536 SNAPC4Q5SXM2 1469 aa21.78■■□□□ 1.08
SIGIRR-214ENST00000528536 BIVM-ERCC5R4GMW8 1640 aa21.78■■□□□ 1.08
SIGIRR-214ENST00000528536 MAGI1Q96QZ7 1491 aaPredicted RBP21.77■■□□□ 1.08
SIGIRR-214ENST00000528536 TOP2BQ02880 1626 aa21.77■■□□□ 1.08
SIGIRR-214ENST00000528536 ABCA10Q8WWZ4 1543 aa21.77■■□□□ 1.08
SIGIRR-214ENST00000528536 WRNQ14191 1432 aaPredicted RBP eCLIP21.77■■□□□ 1.08
SIGIRR-214ENST00000528536 TRIM41Q8WV44 630 aa21.76■■□□□ 1.07
SIGIRR-214ENST00000528536 FBLN2P98095 1184 aa21.74■■□□□ 1.07
SIGIRR-214ENST00000528536 GAPVD1Q14C86 1478 aa21.73■■□□□ 1.07
SIGIRR-214ENST00000528536 SYNJ1O43426 1573 aa21.73■■□□□ 1.07
SIGIRR-214ENST00000528536 RIMBP3CA6NJZ7 1639 aa21.73■■□□□ 1.07
SIGIRR-214ENST00000528536 RIMBP3BA6NNM3 1639 aa21.73■■□□□ 1.07
SIGIRR-214ENST00000528536 ABCA5Q8WWZ7 1642 aa21.73■■□□□ 1.07
SIGIRR-214ENST00000528536 RIMBP3Q9UFD9 1639 aa21.73■■□□□ 1.07
SIGIRR-214ENST00000528536 PBRM1Q86U86 1689 aa21.72■■□□□ 1.07
SIGIRR-214ENST00000528536 ARHGEF11O15085 1522 aa21.7■■□□□ 1.06
SIGIRR-214ENST00000528536 SYNJ2O15056 1496 aa21.69■■□□□ 1.06
SIGIRR-214ENST00000528536 CHMP7Q8WUX9 453 aaPredicted RBP21.67■■□□□ 1.06
SIGIRR-214ENST00000528536 CLASP1Q7Z460 1538 aa21.61■■□□□ 1.05
SIGIRR-214ENST00000528536 ERICH3Q5RHP9 1530 aa21.54■■□□□ 1.04
SIGIRR-214ENST00000528536 ADAMTS12P58397 1594 aa21.53■■□□□ 1.04
SIGIRR-214ENST00000528536 GRIN2AQ12879 1464 aa21.5■■□□□ 1.03
SIGIRR-214ENST00000528536 ARAP1Q96P48 1450 aa21.49■■□□□ 1.03
SIGIRR-214ENST00000528536 FHAD1B1AJZ9 1412 aa21.48■■□□□ 1.03
SIGIRR-214ENST00000528536 CYB5RLQ6IPT4 315 aa21.46■■□□□ 1.03
SIGIRR-214ENST00000528536 NUP160Q12769 1436 aa21.42■■□□□ 1.02
SIGIRR-214ENST00000528536 CEP170Q5SW79 1584 aa21.39■■□□□ 1.01
SIGIRR-214ENST00000528536 KIF27Q86VH2 1401 aa21.36■■□□□ 1.01
SIGIRR-214ENST00000528536 SHROOM2Q13796 1616 aa21.3■■□□□ 1
SIGIRR-214ENST00000528536 CUL7Q14999 1698 aa21.3■■□□□ 1
SIGIRR-214ENST00000528536 IGF1RP08069 1367 aa21.25■□□□□ 0.99
SIGIRR-214ENST00000528536 RUSC2Q8N2Y8 1516 aa21.24■□□□□ 0.99
SIGIRR-214ENST00000528536 ERCC6L2Q5T890 1561 aa21.23■□□□□ 0.99
SIGIRR-214ENST00000528536 PRG4Q92954 1404 aaPredicted RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms