RNA–Protein interactions for RNA: ENST00000528529.1

MRPL49-205, Transcript of mitochondrial ribosomal protein L49, humanhuman

TSL 3

Gene MRPL49, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-205ENST00000528529 NISCHQ9Y2I1 1504 aa39.19■■■■□ 3.86
MRPL49-205ENST00000528529 CCDC180Q9P1Z9 1646 aa35.24■■■■□ 3.23
MRPL49-205ENST00000528529 ABCC9O60706 1549 aa35.05■■■■□ 3.2
MRPL49-205ENST00000528529 RB1CC1Q8TDY2 1594 aa33.44■■■□□ 2.94
MRPL49-205ENST00000528529 NACADO15069 1562 aa33.21■■■□□ 2.91
MRPL49-205ENST00000528529 DCAF8L2P0C7V8 631 aa33.01■■■□□ 2.87
MRPL49-205ENST00000528529 UNC13AQ9UPW8 1703 aa32.81■■■□□ 2.84
MRPL49-205ENST00000528529 MYO15BQ96JP2 1530 aa32.74■■■□□ 2.83
MRPL49-205ENST00000528529 DNAJC5BQ9UF47 199 aa32.68■■■□□ 2.82
MRPL49-205ENST00000528529 PABPN1Q86U42 306 aaKnown RBP eCLIP32.58■■■□□ 2.81
MRPL49-205ENST00000528529 ZCCHC6Q5VYS8 1495 aaKnown RBP32.52■■■□□ 2.8
MRPL49-205ENST00000528529 BICRAQ9NZM4 1560 aa32.45■■■□□ 2.78
MRPL49-205ENST00000528529 DCAF1Q9Y4B6 1507 aa32.37■■■□□ 2.77
MRPL49-205ENST00000528529 SCRIBQ14160 1630 aa32.1■■■□□ 2.73
MRPL49-205ENST00000528529 SHROOM4Q9ULL8 1493 aa32■■■□□ 2.71
MRPL49-205ENST00000528529 CC2D2AQ9P2K1 1620 aa31.71■■■□□ 2.67
MRPL49-205ENST00000528529 EIF4G1Q04637 1599 aaKnown RBP31.65■■■□□ 2.66
MRPL49-205ENST00000528529 CECR2Q9BXF3 1484 aa31.55■■■□□ 2.64
MRPL49-205ENST00000528529 SMARCA4P51532 1647 aa30.62■■■□□ 2.49
MRPL49-205ENST00000528529 NCAPD3P42695 1498 aa30.59■■■□□ 2.49
MRPL49-205ENST00000528529 ATAD2BQ9ULI0 1458 aa30.54■■■□□ 2.48
MRPL49-205ENST00000528529 SMARCA2P51531 1590 aa30.52■■■□□ 2.48
MRPL49-205ENST00000528529 BAZ1AQ9NRL2 1556 aaPredicted RBP30.45■■■□□ 2.47
MRPL49-205ENST00000528529 HMGXB3Q12766 1538 aa30.45■■■□□ 2.47
MRPL49-205ENST00000528529 BAZ1BQ9UIG0 1483 aaKnown RBP30.29■■■□□ 2.44
MRPL49-205ENST00000528529 ERCC6Q03468 1493 aa30.28■■■□□ 2.44
MRPL49-205ENST00000528529 PEG3Q9GZU2 1588 aa30.28■■■□□ 2.44
MRPL49-205ENST00000528529 MROH2BQ7Z745 1585 aa30.21■■■□□ 2.43
MRPL49-205ENST00000528529 CUX2O14529 1486 aa30.16■■■□□ 2.42
MRPL49-205ENST00000528529 NESP48681 1621 aa30.14■■■□□ 2.41
MRPL49-205ENST00000528529 LAMC3Q9Y6N6 1575 aa29.98■■■□□ 2.39
MRPL49-205ENST00000528529 DNAJC5Q9H3Z4 198 aa29.94■■■□□ 2.38
MRPL49-205ENST00000528529 WIZO95785 1651 aa29.92■■■□□ 2.38
MRPL49-205ENST00000528529 THOC2Q8NI27 1593 aaKnown RBP29.87■■■□□ 2.37
MRPL49-205ENST00000528529 KIF21AQ7Z4S6 1674 aa29.87■■■□□ 2.37
MRPL49-205ENST00000528529 PDS5BQ9NTI5 1447 aa29.74■■■□□ 2.35
MRPL49-205ENST00000528529 CADPSQ9ULU8 1353 aa29.67■■■□□ 2.34
MRPL49-205ENST00000528529 RSF1Q96T23 1441 aaPredicted RBP29.58■■■□□ 2.33
MRPL49-205ENST00000528529 TOP2AP11388 1531 aaKnown RBP29.51■■■□□ 2.32
MRPL49-205ENST00000528529 MRC2Q9UBG0 1479 aa29.51■■■□□ 2.31
MRPL49-205ENST00000528529 WDR62O43379 1518 aa29.45■■■□□ 2.3
MRPL49-205ENST00000528529 CEP164Q9UPV0 1460 aa29.42■■■□□ 2.3
MRPL49-205ENST00000528529 FANCD2Q9BXW9 1451 aa29.38■■■□□ 2.29
MRPL49-205ENST00000528529 CFTRP13569 1480 aa29.37■■■□□ 2.29
MRPL49-205ENST00000528529 PRDM2Q13029 1718 aa29.3■■■□□ 2.28
MRPL49-205ENST00000528529 URB2Q14146 1524 aaKnown RBP29.14■■■□□ 2.25
MRPL49-205ENST00000528529 CCDC88BA6NC98 1476 aa29.13■■■□□ 2.25
MRPL49-205ENST00000528529 TOPBP1Q92547 1522 aa28.84■■■□□ 2.21
MRPL49-205ENST00000528529 IFT140Q96RY7 1462 aa28.8■■■□□ 2.2
MRPL49-205ENST00000528529 DNMBPQ6XZF7 1577 aa28.79■■■□□ 2.2
MRPL49-205ENST00000528529 ABCC8Q09428 1581 aa28.78■■■□□ 2.2
MRPL49-205ENST00000528529 ZNF608Q9ULD9 1512 aaPredicted RBP28.75■■■□□ 2.19
MRPL49-205ENST00000528529 TRIM41Q8WV44 630 aa28.74■■■□□ 2.19
MRPL49-205ENST00000528529 OSCARQ8IYS5 282 aa28.73■■■□□ 2.19
MRPL49-205ENST00000528529 EIF4G3O43432 1585 aaKnown RBP28.68■■■□□ 2.18
MRPL49-205ENST00000528529 TARBP1Q13395 1621 aaKnown RBP28.61■■■□□ 2.17
MRPL49-205ENST00000528529 POLA1P09884 1462 aaPredicted RBP28.55■■■□□ 2.16
MRPL49-205ENST00000528529 CHD1O14646 1710 aa28.5■■■□□ 2.15
MRPL49-205ENST00000528529 AQRO60306 1485 aaKnown RBP eCLIP28.48■■■□□ 2.15
MRPL49-205ENST00000528529 RIMBP3CA6NJZ7 1639 aa28.47■■■□□ 2.15
MRPL49-205ENST00000528529 RIMBP3BA6NNM3 1639 aa28.47■■■□□ 2.15
MRPL49-205ENST00000528529 RIMBP3Q9UFD9 1639 aa28.47■■■□□ 2.15
MRPL49-205ENST00000528529 RAD54L2Q9Y4B4 1467 aa28.44■■■□□ 2.14
MRPL49-205ENST00000528529 FGD5Q6ZNL6 1462 aa28.4■■■□□ 2.14
MRPL49-205ENST00000528529 CUX1P39880 1505 aa28.39■■■□□ 2.14
MRPL49-205ENST00000528529 SOGA1O94964 1423 aa28.39■■■□□ 2.14
MRPL49-205ENST00000528529 SUPT5HO00267 1087 aaKnown RBP28.36■■■□□ 2.13
MRPL49-205ENST00000528529 ARHGEF11O15085 1522 aa28.36■■■□□ 2.13
MRPL49-205ENST00000528529 WDR97A6NE52 1622 aa28.34■■■□□ 2.13
MRPL49-205ENST00000528529 TDRD9Q8NDG6 1382 aaKnown RBP28.32■■■□□ 2.12
MRPL49-205ENST00000528529 FBLN2P98095 1184 aa28.29■■■□□ 2.12
MRPL49-205ENST00000528529 SNAPC4Q5SXM2 1469 aa28.24■■■□□ 2.11
MRPL49-205ENST00000528529 PBRM1Q86U86 1689 aa28.19■■■□□ 2.1
MRPL49-205ENST00000528529 GRIN2BQ13224 1484 aa28.16■■■□□ 2.1
MRPL49-205ENST00000528529 MAGI1Q96QZ7 1491 aaPredicted RBP28.16■■■□□ 2.1
MRPL49-205ENST00000528529 SYNJ1O43426 1573 aa28.1■■■□□ 2.09
MRPL49-205ENST00000528529 ABCA5Q8WWZ7 1642 aa28.08■■■□□ 2.09
MRPL49-205ENST00000528529 CYB5RLQ6IPT4 315 aa28.08■■■□□ 2.09
MRPL49-205ENST00000528529 GAPVD1Q14C86 1478 aa28.08■■■□□ 2.09
MRPL49-205ENST00000528529 CLASP1Q7Z460 1538 aa28.08■■■□□ 2.08
MRPL49-205ENST00000528529 CHMP7Q8WUX9 453 aaPredicted RBP28.07■■■□□ 2.08
MRPL49-205ENST00000528529 ARAP1Q96P48 1450 aa28.07■■■□□ 2.08
MRPL49-205ENST00000528529 SYNJ2O15056 1496 aa28.06■■■□□ 2.08
MRPL49-205ENST00000528529 ABCA10Q8WWZ4 1543 aa28.06■■■□□ 2.08
MRPL49-205ENST00000528529 BIVM-ERCC5R4GMW8 1640 aa28.03■■■□□ 2.08
MRPL49-205ENST00000528529 TOP2BQ02880 1626 aa28■■■□□ 2.07
MRPL49-205ENST00000528529 WRNQ14191 1432 aaPredicted RBP eCLIP27.95■■■□□ 2.07
MRPL49-205ENST00000528529 ADAMTS12P58397 1594 aa27.86■■■□□ 2.05
MRPL49-205ENST00000528529 GRIN2AQ12879 1464 aa27.81■■■□□ 2.04
MRPL49-205ENST00000528529 TRHP20396 242 aaPredicted RBP27.76■■■□□ 2.03
MRPL49-205ENST00000528529 CEP170Q5SW79 1584 aa27.73■■■□□ 2.03
MRPL49-205ENST00000528529 ERICH3Q5RHP9 1530 aa27.73■■■□□ 2.03
MRPL49-205ENST00000528529 FHAD1B1AJZ9 1412 aa27.71■■■□□ 2.03
MRPL49-205ENST00000528529 NUP160Q12769 1436 aa27.68■■■□□ 2.02
MRPL49-205ENST00000528529 ERCC6L2Q5T890 1561 aa27.65■■■□□ 2.02
MRPL49-205ENST00000528529 SHROOM2Q13796 1616 aa27.62■■■□□ 2.01
MRPL49-205ENST00000528529 RUSC2Q8N2Y8 1516 aa27.47■■□□□ 1.99
MRPL49-205ENST00000528529 CUL7Q14999 1698 aa27.42■■□□□ 1.98
MRPL49-205ENST00000528529 PRG4Q92954 1404 aaPredicted RBP27.41■■□□□ 1.98
MRPL49-205ENST00000528529 KIF27Q86VH2 1401 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms