RNA–Protein interactions for RNA: ENST00000528500.1

MS4A7-204, Transcript of membrane spanning 4-domains A7, humanhuman

TSL 2

Gene MS4A7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A7-204ENST00000528500 NISCHQ9Y2I1 1504 aa26.94■■□□□ 1.9
MS4A7-204ENST00000528500 CCDC180Q9P1Z9 1646 aa23.88■■□□□ 1.41
MS4A7-204ENST00000528500 ABCC9O60706 1549 aa23.48■■□□□ 1.35
MS4A7-204ENST00000528500 DCAF8L2P0C7V8 631 aa22.65■■□□□ 1.22
MS4A7-204ENST00000528500 RB1CC1Q8TDY2 1594 aa22.52■■□□□ 1.2
MS4A7-204ENST00000528500 NACADO15069 1562 aa22.5■■□□□ 1.19
MS4A7-204ENST00000528500 ZCCHC6Q5VYS8 1495 aaKnown RBP22.41■■□□□ 1.18
MS4A7-204ENST00000528500 MYO15BQ96JP2 1530 aa22.34■■□□□ 1.17
MS4A7-204ENST00000528500 DCAF1Q9Y4B6 1507 aa22.25■■□□□ 1.15
MS4A7-204ENST00000528500 UNC13AQ9UPW8 1703 aa22.01■■□□□ 1.11
MS4A7-204ENST00000528500 PABPN1Q86U42 306 aaKnown RBP eCLIP22■■□□□ 1.11
MS4A7-204ENST00000528500 BICRAQ9NZM4 1560 aa21.86■■□□□ 1.09
MS4A7-204ENST00000528500 SCRIBQ14160 1630 aa21.84■■□□□ 1.09
MS4A7-204ENST00000528500 DNAJC5BQ9UF47 199 aa21.63■■□□□ 1.05
MS4A7-204ENST00000528500 SHROOM4Q9ULL8 1493 aa21.56■■□□□ 1.04
MS4A7-204ENST00000528500 EIF4G1Q04637 1599 aaKnown RBP21.27■□□□□ 0.99
MS4A7-204ENST00000528500 CC2D2AQ9P2K1 1620 aa21.2■□□□□ 0.98
MS4A7-204ENST00000528500 CECR2Q9BXF3 1484 aa21.07■□□□□ 0.96
MS4A7-204ENST00000528500 SMARCA4P51532 1647 aa20.89■□□□□ 0.93
MS4A7-204ENST00000528500 BAZ1AQ9NRL2 1556 aaPredicted RBP20.85■□□□□ 0.93
MS4A7-204ENST00000528500 ATAD2BQ9ULI0 1458 aa20.81■□□□□ 0.92
MS4A7-204ENST00000528500 NCAPD3P42695 1498 aa20.79■□□□□ 0.92
MS4A7-204ENST00000528500 MROH2BQ7Z745 1585 aa20.78■□□□□ 0.92
MS4A7-204ENST00000528500 SMARCA2P51531 1590 aa20.74■□□□□ 0.91
MS4A7-204ENST00000528500 PEG3Q9GZU2 1588 aa20.66■□□□□ 0.9
MS4A7-204ENST00000528500 HMGXB3Q12766 1538 aa20.63■□□□□ 0.89
MS4A7-204ENST00000528500 BAZ1BQ9UIG0 1483 aaKnown RBP20.62■□□□□ 0.89
MS4A7-204ENST00000528500 WIZO95785 1651 aa20.55■□□□□ 0.88
MS4A7-204ENST00000528500 RSF1Q96T23 1441 aaPredicted RBP20.55■□□□□ 0.88
MS4A7-204ENST00000528500 NESP48681 1621 aa20.31■□□□□ 0.84
MS4A7-204ENST00000528500 TOP2AP11388 1531 aaKnown RBP20.3■□□□□ 0.84
MS4A7-204ENST00000528500 ERCC6Q03468 1493 aa20.21■□□□□ 0.83
MS4A7-204ENST00000528500 CADPSQ9ULU8 1353 aa20.21■□□□□ 0.83
MS4A7-204ENST00000528500 LAMC3Q9Y6N6 1575 aa20.2■□□□□ 0.82
MS4A7-204ENST00000528500 SUPT5HO00267 1087 aaKnown RBP20.13■□□□□ 0.81
MS4A7-204ENST00000528500 CCDC88BA6NC98 1476 aa20.11■□□□□ 0.81
MS4A7-204ENST00000528500 PDS5BQ9NTI5 1447 aa20.1■□□□□ 0.81
MS4A7-204ENST00000528500 CFTRP13569 1480 aa20.05■□□□□ 0.8
MS4A7-204ENST00000528500 KIF21AQ7Z4S6 1674 aa20.03■□□□□ 0.8
MS4A7-204ENST00000528500 CUX2O14529 1486 aa19.96■□□□□ 0.79
MS4A7-204ENST00000528500 FANCD2Q9BXW9 1451 aa19.95■□□□□ 0.78
MS4A7-204ENST00000528500 THOC2Q8NI27 1593 aaKnown RBP19.93■□□□□ 0.78
MS4A7-204ENST00000528500 CEP164Q9UPV0 1460 aa19.91■□□□□ 0.78
MS4A7-204ENST00000528500 MRC2Q9UBG0 1479 aa19.88■□□□□ 0.77
MS4A7-204ENST00000528500 PRDM2Q13029 1718 aa19.84■□□□□ 0.77
MS4A7-204ENST00000528500 WDR62O43379 1518 aa19.8■□□□□ 0.76
MS4A7-204ENST00000528500 URB2Q14146 1524 aaKnown RBP19.76■□□□□ 0.75
MS4A7-204ENST00000528500 TOPBP1Q92547 1522 aa19.63■□□□□ 0.73
MS4A7-204ENST00000528500 ABCC8Q09428 1581 aa19.61■□□□□ 0.73
MS4A7-204ENST00000528500 DNMBPQ6XZF7 1577 aa19.58■□□□□ 0.73
MS4A7-204ENST00000528500 IFT140Q96RY7 1462 aa19.5■□□□□ 0.71
MS4A7-204ENST00000528500 CUX1P39880 1505 aa19.48■□□□□ 0.71
MS4A7-204ENST00000528500 POLA1P09884 1462 aaPredicted RBP19.46■□□□□ 0.71
MS4A7-204ENST00000528500 DNAJC5Q9H3Z4 198 aa19.45■□□□□ 0.7
MS4A7-204ENST00000528500 ZNF608Q9ULD9 1512 aaPredicted RBP19.44■□□□□ 0.7
MS4A7-204ENST00000528500 SOGA1O94964 1423 aa19.42■□□□□ 0.7
MS4A7-204ENST00000528500 FGD5Q6ZNL6 1462 aa19.42■□□□□ 0.7
MS4A7-204ENST00000528500 RAD54L2Q9Y4B4 1467 aa19.42■□□□□ 0.7
MS4A7-204ENST00000528500 TARBP1Q13395 1621 aaKnown RBP19.4■□□□□ 0.7
MS4A7-204ENST00000528500 WRNQ14191 1432 aaPredicted RBP eCLIP19.37■□□□□ 0.69
MS4A7-204ENST00000528500 AQRO60306 1485 aaKnown RBP eCLIP19.35■□□□□ 0.69
MS4A7-204ENST00000528500 TDRD9Q8NDG6 1382 aaKnown RBP19.33■□□□□ 0.69
MS4A7-204ENST00000528500 SYNJ1O43426 1573 aa19.3■□□□□ 0.68
MS4A7-204ENST00000528500 EIF4G3O43432 1585 aaKnown RBP19.3■□□□□ 0.68
MS4A7-204ENST00000528500 TOP2BQ02880 1626 aa19.29■□□□□ 0.68
MS4A7-204ENST00000528500 BIVM-ERCC5R4GMW8 1640 aa19.27■□□□□ 0.68
MS4A7-204ENST00000528500 OSCARQ8IYS5 282 aa19.24■□□□□ 0.67
MS4A7-204ENST00000528500 ABCA10Q8WWZ4 1543 aa19.22■□□□□ 0.67
MS4A7-204ENST00000528500 WDR97A6NE52 1622 aa19.2■□□□□ 0.66
MS4A7-204ENST00000528500 GAPVD1Q14C86 1478 aa19.17■□□□□ 0.66
MS4A7-204ENST00000528500 FBLN2P98095 1184 aa19.17■□□□□ 0.66
MS4A7-204ENST00000528500 GRIN2BQ13224 1484 aa19.16■□□□□ 0.66
MS4A7-204ENST00000528500 SNAPC4Q5SXM2 1469 aa19.13■□□□□ 0.65
MS4A7-204ENST00000528500 ABCA5Q8WWZ7 1642 aa19.11■□□□□ 0.65
MS4A7-204ENST00000528500 CHMP7Q8WUX9 453 aaPredicted RBP19.1■□□□□ 0.65
MS4A7-204ENST00000528500 MAGI1Q96QZ7 1491 aaPredicted RBP19.09■□□□□ 0.65
MS4A7-204ENST00000528500 CHD1O14646 1710 aa19.08■□□□□ 0.64
MS4A7-204ENST00000528500 PBRM1Q86U86 1689 aa19.08■□□□□ 0.64
MS4A7-204ENST00000528500 SYNJ2O15056 1496 aa19.03■□□□□ 0.64
MS4A7-204ENST00000528500 TRIM41Q8WV44 630 aa18.99■□□□□ 0.63
MS4A7-204ENST00000528500 ERICH3Q5RHP9 1530 aa18.97■□□□□ 0.63
MS4A7-204ENST00000528500 KIF27Q86VH2 1401 aa18.97■□□□□ 0.63
MS4A7-204ENST00000528500 FHAD1B1AJZ9 1412 aa18.94■□□□□ 0.62
MS4A7-204ENST00000528500 ADAMTS12P58397 1594 aa18.93■□□□□ 0.62
MS4A7-204ENST00000528500 IGF1RP08069 1367 aa18.93■□□□□ 0.62
MS4A7-204ENST00000528500 GRIN2AQ12879 1464 aa18.9■□□□□ 0.62
MS4A7-204ENST00000528500 CLASP1Q7Z460 1538 aa18.86■□□□□ 0.61
MS4A7-204ENST00000528500 RIMBP3CA6NJZ7 1639 aa18.85■□□□□ 0.61
MS4A7-204ENST00000528500 RIMBP3BA6NNM3 1639 aa18.85■□□□□ 0.61
MS4A7-204ENST00000528500 RIMBP3Q9UFD9 1639 aa18.85■□□□□ 0.61
MS4A7-204ENST00000528500 ARHGEF11O15085 1522 aa18.84■□□□□ 0.61
MS4A7-204ENST00000528500 RUSC2Q8N2Y8 1516 aa18.84■□□□□ 0.61
MS4A7-204ENST00000528500 NUP160Q12769 1436 aa18.83■□□□□ 0.6
MS4A7-204ENST00000528500 CARMIL1Q5VZK9 1371 aa18.81■□□□□ 0.6
MS4A7-204ENST00000528500 CEP170Q5SW79 1584 aa18.8■□□□□ 0.6
MS4A7-204ENST00000528500 CUL7Q14999 1698 aa18.78■□□□□ 0.6
MS4A7-204ENST00000528500 CHIC1Q5VXU3 224 aa18.77■□□□□ 0.6
MS4A7-204ENST00000528500 CYB5RLQ6IPT4 315 aa18.77■□□□□ 0.6
MS4A7-204ENST00000528500 JPH4Q96JJ6 628 aa18.71■□□□□ 0.59
MS4A7-204ENST00000528500 ARAP1Q96P48 1450 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 204 ms