RNA–Protein interactions for RNA: ENST00000528488.5

C11orf49-215, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 2

Gene C11orf49, Length 1,623 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-215ENST00000528488 NISCHQ9Y2I1 1504 aa47.8■■■■■ 5.24
C11orf49-215ENST00000528488 CCDC180Q9P1Z9 1646 aa42.19■■■■■ 4.34
C11orf49-215ENST00000528488 ABCC9O60706 1549 aa40.52■■■■■ 4.08
C11orf49-215ENST00000528488 ZCCHC6Q5VYS8 1495 aaKnown RBP40■■■■□ 3.99
C11orf49-215ENST00000528488 DCAF8L2P0C7V8 631 aa39.63■■■■□ 3.93
C11orf49-215ENST00000528488 DCAF1Q9Y4B6 1507 aa39.55■■■■□ 3.92
C11orf49-215ENST00000528488 NACADO15069 1562 aa39.42■■■■□ 3.9
C11orf49-215ENST00000528488 MYO15BQ96JP2 1530 aa39.4■■■■□ 3.9
C11orf49-215ENST00000528488 RB1CC1Q8TDY2 1594 aa39.3■■■■□ 3.88
C11orf49-215ENST00000528488 SCRIBQ14160 1630 aa38.61■■■■□ 3.77
C11orf49-215ENST00000528488 UNC13AQ9UPW8 1703 aa38.56■■■■□ 3.76
C11orf49-215ENST00000528488 SHROOM4Q9ULL8 1493 aa38.31■■■■□ 3.72
C11orf49-215ENST00000528488 BICRAQ9NZM4 1560 aa38.12■■■■□ 3.69
C11orf49-215ENST00000528488 PABPN1Q86U42 306 aaKnown RBP eCLIP37.98■■■■□ 3.67
C11orf49-215ENST00000528488 CECR2Q9BXF3 1484 aa37.18■■■■□ 3.54
C11orf49-215ENST00000528488 EIF4G1Q04637 1599 aaKnown RBP37.03■■■■□ 3.52
C11orf49-215ENST00000528488 BAZ1AQ9NRL2 1556 aaPredicted RBP37■■■■□ 3.51
C11orf49-215ENST00000528488 SMARCA4P51532 1647 aa36.97■■■■□ 3.51
C11orf49-215ENST00000528488 MROH2BQ7Z745 1585 aa36.88■■■■□ 3.5
C11orf49-215ENST00000528488 RSF1Q96T23 1441 aaPredicted RBP36.71■■■■□ 3.47
C11orf49-215ENST00000528488 CC2D2AQ9P2K1 1620 aa36.7■■■■□ 3.47
C11orf49-215ENST00000528488 WIZO95785 1651 aa36.58■■■■□ 3.45
C11orf49-215ENST00000528488 PEG3Q9GZU2 1588 aa36.54■■■■□ 3.44
C11orf49-215ENST00000528488 ATAD2BQ9ULI0 1458 aa36.52■■■■□ 3.44
C11orf49-215ENST00000528488 SMARCA2P51531 1590 aa36.51■■■■□ 3.44
C11orf49-215ENST00000528488 DNAJC5BQ9UF47 199 aa36.45■■■■□ 3.42
C11orf49-215ENST00000528488 SUPT5HO00267 1087 aaKnown RBP36.41■■■■□ 3.42
C11orf49-215ENST00000528488 NCAPD3P42695 1498 aa36.34■■■■□ 3.41
C11orf49-215ENST00000528488 HMGXB3Q12766 1538 aa36.28■■■■□ 3.4
C11orf49-215ENST00000528488 BAZ1BQ9UIG0 1483 aaKnown RBP36.27■■■■□ 3.4
C11orf49-215ENST00000528488 TOP2AP11388 1531 aaKnown RBP36.18■■■■□ 3.38
C11orf49-215ENST00000528488 CCDC88BA6NC98 1476 aa35.74■■■■□ 3.31
C11orf49-215ENST00000528488 CADPSQ9ULU8 1353 aa35.33■■■■□ 3.25
C11orf49-215ENST00000528488 NESP48681 1621 aa35.32■■■■□ 3.24
C11orf49-215ENST00000528488 LAMC3Q9Y6N6 1575 aa35.3■■■■□ 3.24
C11orf49-215ENST00000528488 CFTRP13569 1480 aa35.3■■■■□ 3.24
C11orf49-215ENST00000528488 PRDM2Q13029 1718 aa35.24■■■■□ 3.23
C11orf49-215ENST00000528488 PDS5BQ9NTI5 1447 aa35■■■■□ 3.19
C11orf49-215ENST00000528488 KIF21AQ7Z4S6 1674 aa34.98■■■■□ 3.19
C11orf49-215ENST00000528488 FANCD2Q9BXW9 1451 aa34.96■■■■□ 3.19
C11orf49-215ENST00000528488 CEP164Q9UPV0 1460 aa34.85■■■■□ 3.17
C11orf49-215ENST00000528488 ERCC6Q03468 1493 aa34.84■■■■□ 3.17
C11orf49-215ENST00000528488 ABCC8Q09428 1581 aa34.74■■■■□ 3.15
C11orf49-215ENST00000528488 MRC2Q9UBG0 1479 aa34.63■■■■□ 3.13
C11orf49-215ENST00000528488 THOC2Q8NI27 1593 aaKnown RBP34.62■■■■□ 3.13
C11orf49-215ENST00000528488 WRNQ14191 1432 aaPredicted RBP eCLIP34.6■■■■□ 3.13
C11orf49-215ENST00000528488 URB2Q14146 1524 aaKnown RBP34.59■■■■□ 3.13
C11orf49-215ENST00000528488 CUX1P39880 1505 aa34.56■■■■□ 3.12
C11orf49-215ENST00000528488 DNMBPQ6XZF7 1577 aa34.54■■■■□ 3.12
C11orf49-215ENST00000528488 SYNJ1O43426 1573 aa34.53■■■■□ 3.12
C11orf49-215ENST00000528488 TOPBP1Q92547 1522 aa34.51■■■■□ 3.12
C11orf49-215ENST00000528488 WDR62O43379 1518 aa34.5■■■■□ 3.11
C11orf49-215ENST00000528488 BIVM-ERCC5R4GMW8 1640 aa34.48■■■■□ 3.11
C11orf49-215ENST00000528488 TOP2BQ02880 1626 aa34.47■■■■□ 3.11
C11orf49-215ENST00000528488 CHIC1Q5VXU3 224 aa34.42■■■■□ 3.1
C11orf49-215ENST00000528488 FGD5Q6ZNL6 1462 aa34.3■■■■□ 3.08
C11orf49-215ENST00000528488 TRIM41Q8WV44 630 aa34.3■■■■□ 3.08
C11orf49-215ENST00000528488 POLA1P09884 1462 aaPredicted RBP34.26■■■■□ 3.08
C11orf49-215ENST00000528488 CUX2O14529 1486 aa34.16■■■■□ 3.06
C11orf49-215ENST00000528488 RAD54L2Q9Y4B4 1467 aa34.12■■■■□ 3.05
C11orf49-215ENST00000528488 SOGA1O94964 1423 aa34.11■■■■□ 3.05
C11orf49-215ENST00000528488 TARBP1Q13395 1621 aaKnown RBP34.09■■■■□ 3.05
C11orf49-215ENST00000528488 IFT140Q96RY7 1462 aa34.06■■■■□ 3.04
C11orf49-215ENST00000528488 WDR97A6NE52 1622 aa34.04■■■■□ 3.04
C11orf49-215ENST00000528488 ABCA10Q8WWZ4 1543 aa33.99■■■■□ 3.03
C11orf49-215ENST00000528488 ZNF608Q9ULD9 1512 aaPredicted RBP33.88■■■■□ 3.01
C11orf49-215ENST00000528488 TDRD9Q8NDG6 1382 aaKnown RBP33.84■■■■□ 3.01
C11orf49-215ENST00000528488 ABCA5Q8WWZ7 1642 aa33.83■■■■□ 3.01
C11orf49-215ENST00000528488 EIF4G3O43432 1585 aaKnown RBP33.82■■■■□ 3
C11orf49-215ENST00000528488 RUSC2Q8N2Y8 1516 aa33.8■■■■□ 3
C11orf49-215ENST00000528488 KIF27Q86VH2 1401 aa33.79■■■■□ 3
C11orf49-215ENST00000528488 AQRO60306 1485 aaKnown RBP eCLIP33.78■■■■□ 3
C11orf49-215ENST00000528488 GAPVD1Q14C86 1478 aa33.75■■■□□ 2.99
C11orf49-215ENST00000528488 PBRM1Q86U86 1689 aa33.73■■■□□ 2.99
C11orf49-215ENST00000528488 EEA1Q15075 1411 aa33.66■■■□□ 2.98
C11orf49-215ENST00000528488 FAM9AQ8IZU1 332 aaPredicted RBP33.64■■■□□ 2.98
C11orf49-215ENST00000528488 GRIN2BQ13224 1484 aa33.62■■■□□ 2.97
C11orf49-215ENST00000528488 ERICH3Q5RHP9 1530 aa33.59■■■□□ 2.97
C11orf49-215ENST00000528488 IGF1RP08069 1367 aa33.55■■■□□ 2.96
C11orf49-215ENST00000528488 SNAPC4Q5SXM2 1469 aa33.5■■■□□ 2.95
C11orf49-215ENST00000528488 CSRNP3Q8WYN3 585 aa33.5■■■□□ 2.95
C11orf49-215ENST00000528488 CUL7Q14999 1698 aa33.49■■■□□ 2.95
C11orf49-215ENST00000528488 ADAMTS12P58397 1594 aa33.45■■■□□ 2.95
C11orf49-215ENST00000528488 MAGI1Q96QZ7 1491 aaPredicted RBP33.45■■■□□ 2.95
C11orf49-215ENST00000528488 CARMIL1Q5VZK9 1371 aa33.38■■■□□ 2.93
C11orf49-215ENST00000528488 FHAD1B1AJZ9 1412 aa33.37■■■□□ 2.93
C11orf49-215ENST00000528488 PRXQ9BXM0 1461 aa33.35■■■□□ 2.93
C11orf49-215ENST00000528488 KIF21BO75037 1637 aa33.32■■■□□ 2.92
C11orf49-215ENST00000528488 SYNJ2O15056 1496 aa33.31■■■□□ 2.92
C11orf49-215ENST00000528488 CHD1O14646 1710 aa33.29■■■□□ 2.92
C11orf49-215ENST00000528488 RAPGEF2Q9Y4G8 1499 aa33.28■■■□□ 2.92
C11orf49-215ENST00000528488 CHMP7Q8WUX9 453 aaPredicted RBP33.22■■■□□ 2.91
C11orf49-215ENST00000528488 FBLN2P98095 1184 aa33.21■■■□□ 2.91
C11orf49-215ENST00000528488 GRIN2AQ12879 1464 aa33.21■■■□□ 2.91
C11orf49-215ENST00000528488 EHMT2Q96KQ7 1210 aa33.18■■■□□ 2.9
C11orf49-215ENST00000528488 GOLGA3Q08378 1498 aa33.16■■■□□ 2.9
C11orf49-215ENST00000528488 CEP170Q5SW79 1584 aa33.05■■■□□ 2.88
C11orf49-215ENST00000528488 LOC105371045A0A1W2PR82 267 aa33.04■■■□□ 2.88
C11orf49-215ENST00000528488 CTTNBP2Q8WZ74 1663 aa33.03■■■□□ 2.88
C11orf49-215ENST00000528488 NUP160Q12769 1436 aa33.01■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms