RNA–Protein interactions for RNA: ENST00000528471.1

CHRDL2-205, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-205ENST00000528471 NISCHQ9Y2I1 1504 aa34.37■■■■□ 3.09
CHRDL2-205ENST00000528471 CCDC180Q9P1Z9 1646 aa30.83■■■□□ 2.53
CHRDL2-205ENST00000528471 ABCC9O60706 1549 aa30.43■■■□□ 2.46
CHRDL2-205ENST00000528471 RB1CC1Q8TDY2 1594 aa29.16■■■□□ 2.26
CHRDL2-205ENST00000528471 NACADO15069 1562 aa29■■■□□ 2.23
CHRDL2-205ENST00000528471 DCAF8L2P0C7V8 631 aa28.85■■■□□ 2.21
CHRDL2-205ENST00000528471 MYO15BQ96JP2 1530 aa28.66■■■□□ 2.18
CHRDL2-205ENST00000528471 UNC13AQ9UPW8 1703 aa28.57■■■□□ 2.16
CHRDL2-205ENST00000528471 ZCCHC6Q5VYS8 1495 aaKnown RBP28.56■■■□□ 2.16
CHRDL2-205ENST00000528471 DCAF1Q9Y4B6 1507 aa28.42■■■□□ 2.14
CHRDL2-205ENST00000528471 PABPN1Q86U42 306 aaKnown RBP eCLIP28.31■■■□□ 2.12
CHRDL2-205ENST00000528471 BICRAQ9NZM4 1560 aa28.24■■■□□ 2.11
CHRDL2-205ENST00000528471 DNAJC5BQ9UF47 199 aa28.15■■■□□ 2.1
CHRDL2-205ENST00000528471 SCRIBQ14160 1630 aa28.08■■■□□ 2.09
CHRDL2-205ENST00000528471 SHROOM4Q9ULL8 1493 aa27.92■■■□□ 2.06
CHRDL2-205ENST00000528471 EIF4G1Q04637 1599 aaKnown RBP27.55■■■□□ 2
CHRDL2-205ENST00000528471 CC2D2AQ9P2K1 1620 aa27.54■■■□□ 2
CHRDL2-205ENST00000528471 CECR2Q9BXF3 1484 aa27.38■■□□□ 1.97
CHRDL2-205ENST00000528471 SMARCA4P51532 1647 aa26.8■■□□□ 1.88
CHRDL2-205ENST00000528471 BAZ1AQ9NRL2 1556 aaPredicted RBP26.7■■□□□ 1.87
CHRDL2-205ENST00000528471 NCAPD3P42695 1498 aa26.7■■□□□ 1.86
CHRDL2-205ENST00000528471 SMARCA2P51531 1590 aa26.69■■□□□ 1.86
CHRDL2-205ENST00000528471 ATAD2BQ9ULI0 1458 aa26.68■■□□□ 1.86
CHRDL2-205ENST00000528471 HMGXB3Q12766 1538 aa26.61■■□□□ 1.85
CHRDL2-205ENST00000528471 PEG3Q9GZU2 1588 aa26.51■■□□□ 1.83
CHRDL2-205ENST00000528471 BAZ1BQ9UIG0 1483 aaKnown RBP26.49■■□□□ 1.83
CHRDL2-205ENST00000528471 MROH2BQ7Z745 1585 aa26.48■■□□□ 1.83
CHRDL2-205ENST00000528471 ERCC6Q03468 1493 aa26.3■■□□□ 1.8
CHRDL2-205ENST00000528471 WIZO95785 1651 aa26.23■■□□□ 1.79
CHRDL2-205ENST00000528471 NESP48681 1621 aa26.21■■□□□ 1.79
CHRDL2-205ENST00000528471 LAMC3Q9Y6N6 1575 aa26.14■■□□□ 1.78
CHRDL2-205ENST00000528471 CUX2O14529 1486 aa26.12■■□□□ 1.77
CHRDL2-205ENST00000528471 RSF1Q96T23 1441 aaPredicted RBP26.01■■□□□ 1.75
CHRDL2-205ENST00000528471 KIF21AQ7Z4S6 1674 aa26■■□□□ 1.75
CHRDL2-205ENST00000528471 THOC2Q8NI27 1593 aaKnown RBP25.96■■□□□ 1.75
CHRDL2-205ENST00000528471 PDS5BQ9NTI5 1447 aa25.93■■□□□ 1.74
CHRDL2-205ENST00000528471 TOP2AP11388 1531 aaKnown RBP25.91■■□□□ 1.74
CHRDL2-205ENST00000528471 CADPSQ9ULU8 1353 aa25.9■■□□□ 1.74
CHRDL2-205ENST00000528471 MRC2Q9UBG0 1479 aa25.71■■□□□ 1.71
CHRDL2-205ENST00000528471 CFTRP13569 1480 aa25.69■■□□□ 1.7
CHRDL2-205ENST00000528471 CEP164Q9UPV0 1460 aa25.69■■□□□ 1.7
CHRDL2-205ENST00000528471 DNAJC5Q9H3Z4 198 aa25.66■■□□□ 1.7
CHRDL2-205ENST00000528471 PRDM2Q13029 1718 aa25.66■■□□□ 1.7
CHRDL2-205ENST00000528471 FANCD2Q9BXW9 1451 aa25.65■■□□□ 1.7
CHRDL2-205ENST00000528471 WDR62O43379 1518 aa25.64■■□□□ 1.7
CHRDL2-205ENST00000528471 CCDC88BA6NC98 1476 aa25.56■■□□□ 1.68
CHRDL2-205ENST00000528471 URB2Q14146 1524 aaKnown RBP25.41■■□□□ 1.66
CHRDL2-205ENST00000528471 TOPBP1Q92547 1522 aa25.21■■□□□ 1.63
CHRDL2-205ENST00000528471 ABCC8Q09428 1581 aa25.18■■□□□ 1.62
CHRDL2-205ENST00000528471 DNMBPQ6XZF7 1577 aa25.18■■□□□ 1.62
CHRDL2-205ENST00000528471 IFT140Q96RY7 1462 aa25.14■■□□□ 1.61
CHRDL2-205ENST00000528471 SUPT5HO00267 1087 aaKnown RBP25.1■■□□□ 1.61
CHRDL2-205ENST00000528471 ZNF608Q9ULD9 1512 aaPredicted RBP25.04■■□□□ 1.6
CHRDL2-205ENST00000528471 EIF4G3O43432 1585 aaKnown RBP25.01■■□□□ 1.59
CHRDL2-205ENST00000528471 TARBP1Q13395 1621 aaKnown RBP24.98■■□□□ 1.59
CHRDL2-205ENST00000528471 POLA1P09884 1462 aaPredicted RBP24.96■■□□□ 1.59
CHRDL2-205ENST00000528471 OSCARQ8IYS5 282 aa24.91■■□□□ 1.58
CHRDL2-205ENST00000528471 CUX1P39880 1505 aa24.88■■□□□ 1.57
CHRDL2-205ENST00000528471 FGD5Q6ZNL6 1462 aa24.86■■□□□ 1.57
CHRDL2-205ENST00000528471 AQRO60306 1485 aaKnown RBP eCLIP24.84■■□□□ 1.57
CHRDL2-205ENST00000528471 RAD54L2Q9Y4B4 1467 aa24.84■■□□□ 1.57
CHRDL2-205ENST00000528471 SOGA1O94964 1423 aa24.83■■□□□ 1.57
CHRDL2-205ENST00000528471 CHD1O14646 1710 aa24.81■■□□□ 1.56
CHRDL2-205ENST00000528471 WDR97A6NE52 1622 aa24.79■■□□□ 1.56
CHRDL2-205ENST00000528471 TRIM41Q8WV44 630 aa24.73■■□□□ 1.55
CHRDL2-205ENST00000528471 TDRD9Q8NDG6 1382 aaKnown RBP24.73■■□□□ 1.55
CHRDL2-205ENST00000528471 RIMBP3CA6NJZ7 1639 aa24.65■■□□□ 1.54
CHRDL2-205ENST00000528471 RIMBP3BA6NNM3 1639 aa24.65■■□□□ 1.54
CHRDL2-205ENST00000528471 RIMBP3Q9UFD9 1639 aa24.65■■□□□ 1.54
CHRDL2-205ENST00000528471 PBRM1Q86U86 1689 aa24.65■■□□□ 1.54
CHRDL2-205ENST00000528471 SNAPC4Q5SXM2 1469 aa24.65■■□□□ 1.54
CHRDL2-205ENST00000528471 FBLN2P98095 1184 aa24.63■■□□□ 1.53
CHRDL2-205ENST00000528471 BIVM-ERCC5R4GMW8 1640 aa24.62■■□□□ 1.53
CHRDL2-205ENST00000528471 GRIN2BQ13224 1484 aa24.61■■□□□ 1.53
CHRDL2-205ENST00000528471 TOP2BQ02880 1626 aa24.6■■□□□ 1.53
CHRDL2-205ENST00000528471 MAGI1Q96QZ7 1491 aaPredicted RBP24.6■■□□□ 1.53
CHRDL2-205ENST00000528471 ABCA10Q8WWZ4 1543 aa24.59■■□□□ 1.53
CHRDL2-205ENST00000528471 ARHGEF11O15085 1522 aa24.58■■□□□ 1.53
CHRDL2-205ENST00000528471 ABCA5Q8WWZ7 1642 aa24.58■■□□□ 1.52
CHRDL2-205ENST00000528471 WRNQ14191 1432 aaPredicted RBP eCLIP24.57■■□□□ 1.52
CHRDL2-205ENST00000528471 SYNJ1O43426 1573 aa24.57■■□□□ 1.52
CHRDL2-205ENST00000528471 GAPVD1Q14C86 1478 aa24.56■■□□□ 1.52
CHRDL2-205ENST00000528471 SYNJ2O15056 1496 aa24.5■■□□□ 1.51
CHRDL2-205ENST00000528471 CHMP7Q8WUX9 453 aaPredicted RBP24.49■■□□□ 1.51
CHRDL2-205ENST00000528471 CLASP1Q7Z460 1538 aa24.44■■□□□ 1.5
CHRDL2-205ENST00000528471 ADAMTS12P58397 1594 aa24.37■■□□□ 1.49
CHRDL2-205ENST00000528471 ARAP1Q96P48 1450 aa24.34■■□□□ 1.49
CHRDL2-205ENST00000528471 CYB5RLQ6IPT4 315 aa24.32■■□□□ 1.48
CHRDL2-205ENST00000528471 ERICH3Q5RHP9 1530 aa24.3■■□□□ 1.48
CHRDL2-205ENST00000528471 GRIN2AQ12879 1464 aa24.3■■□□□ 1.48
CHRDL2-205ENST00000528471 FHAD1B1AJZ9 1412 aa24.25■■□□□ 1.47
CHRDL2-205ENST00000528471 CEP170Q5SW79 1584 aa24.21■■□□□ 1.47
CHRDL2-205ENST00000528471 NUP160Q12769 1436 aa24.18■■□□□ 1.46
CHRDL2-205ENST00000528471 SHROOM2Q13796 1616 aa24.09■■□□□ 1.45
CHRDL2-205ENST00000528471 KIF27Q86VH2 1401 aa24.09■■□□□ 1.45
CHRDL2-205ENST00000528471 CUL7Q14999 1698 aa24.08■■□□□ 1.44
CHRDL2-205ENST00000528471 ERCC6L2Q5T890 1561 aa24.06■■□□□ 1.44
CHRDL2-205ENST00000528471 RUSC2Q8N2Y8 1516 aa24.03■■□□□ 1.44
CHRDL2-205ENST00000528471 TRHP20396 242 aaPredicted RBP23.99■■□□□ 1.43
CHRDL2-205ENST00000528471 IGF1RP08069 1367 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms