RNA–Protein interactions for RNA: ENST00000528406.1

NUP214-219, Transcript of nucleoporin 214, humanhuman

TSL 3

Gene NUP214, Length 393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP214-219ENST00000528406 NISCHQ9Y2I1 1504 aa32.92■■■□□ 2.86
NUP214-219ENST00000528406 ABCC9O60706 1549 aa30.15■■■□□ 2.42
NUP214-219ENST00000528406 CCDC180Q9P1Z9 1646 aa29.62■■■□□ 2.33
NUP214-219ENST00000528406 DNAJC5BQ9UF47 199 aa28.68■■■□□ 2.18
NUP214-219ENST00000528406 RB1CC1Q8TDY2 1594 aa28.44■■■□□ 2.14
NUP214-219ENST00000528406 DCAF8L2P0C7V8 631 aa28.24■■■□□ 2.11
NUP214-219ENST00000528406 NACADO15069 1562 aa28.13■■■□□ 2.09
NUP214-219ENST00000528406 PABPN1Q86U42 306 aaKnown RBP eCLIP28.1■■■□□ 2.09
NUP214-219ENST00000528406 UNC13AQ9UPW8 1703 aa27.82■■■□□ 2.04
NUP214-219ENST00000528406 BICRAQ9NZM4 1560 aa27.62■■■□□ 2.01
NUP214-219ENST00000528406 MYO15BQ96JP2 1530 aa27.55■■■□□ 2
NUP214-219ENST00000528406 CC2D2AQ9P2K1 1620 aa27.16■■□□□ 1.94
NUP214-219ENST00000528406 CECR2Q9BXF3 1484 aa27.16■■□□□ 1.94
NUP214-219ENST00000528406 ZCCHC6Q5VYS8 1495 aaKnown RBP27.14■■□□□ 1.94
NUP214-219ENST00000528406 SHROOM4Q9ULL8 1493 aa27.09■■□□□ 1.93
NUP214-219ENST00000528406 SCRIBQ14160 1630 aa27.08■■□□□ 1.93
NUP214-219ENST00000528406 DCAF1Q9Y4B6 1507 aa27.07■■□□□ 1.92
NUP214-219ENST00000528406 EIF4G1Q04637 1599 aaKnown RBP26.98■■□□□ 1.91
NUP214-219ENST00000528406 DNAJC5Q9H3Z4 198 aa26.58■■□□□ 1.85
NUP214-219ENST00000528406 ERCC6Q03468 1493 aa26.04■■□□□ 1.76
NUP214-219ENST00000528406 CUX2O14529 1486 aa26.04■■□□□ 1.76
NUP214-219ENST00000528406 NCAPD3P42695 1498 aa26■■□□□ 1.75
NUP214-219ENST00000528406 ATAD2BQ9ULI0 1458 aa25.89■■□□□ 1.73
NUP214-219ENST00000528406 NESP48681 1621 aa25.78■■□□□ 1.72
NUP214-219ENST00000528406 SMARCA2P51531 1590 aa25.76■■□□□ 1.71
NUP214-219ENST00000528406 SMARCA4P51532 1647 aa25.74■■□□□ 1.71
NUP214-219ENST00000528406 HMGXB3Q12766 1538 aa25.71■■□□□ 1.71
NUP214-219ENST00000528406 BAZ1BQ9UIG0 1483 aaKnown RBP25.63■■□□□ 1.69
NUP214-219ENST00000528406 BAZ1AQ9NRL2 1556 aaPredicted RBP25.56■■□□□ 1.68
NUP214-219ENST00000528406 THOC2Q8NI27 1593 aaKnown RBP25.48■■□□□ 1.67
NUP214-219ENST00000528406 LAMC3Q9Y6N6 1575 aa25.45■■□□□ 1.66
NUP214-219ENST00000528406 PEG3Q9GZU2 1588 aa25.43■■□□□ 1.66
NUP214-219ENST00000528406 KIF21AQ7Z4S6 1674 aa25.4■■□□□ 1.66
NUP214-219ENST00000528406 MROH2BQ7Z745 1585 aa25.39■■□□□ 1.65
NUP214-219ENST00000528406 PDS5BQ9NTI5 1447 aa25.38■■□□□ 1.65
NUP214-219ENST00000528406 TRIM41Q8WV44 630 aa25.36■■□□□ 1.65
NUP214-219ENST00000528406 CADPSQ9ULU8 1353 aa25.24■■□□□ 1.63
NUP214-219ENST00000528406 MRC2Q9UBG0 1479 aa25.15■■□□□ 1.62
NUP214-219ENST00000528406 WIZO95785 1651 aa25.09■■□□□ 1.61
NUP214-219ENST00000528406 WDR62O43379 1518 aa25.06■■□□□ 1.6
NUP214-219ENST00000528406 CEP164Q9UPV0 1460 aa24.98■■□□□ 1.59
NUP214-219ENST00000528406 OSCARQ8IYS5 282 aa24.95■■□□□ 1.58
NUP214-219ENST00000528406 FANCD2Q9BXW9 1451 aa24.94■■□□□ 1.58
NUP214-219ENST00000528406 CFTRP13569 1480 aa24.83■■□□□ 1.56
NUP214-219ENST00000528406 URB2Q14146 1524 aaKnown RBP24.75■■□□□ 1.55
NUP214-219ENST00000528406 RSF1Q96T23 1441 aaPredicted RBP24.72■■□□□ 1.55
NUP214-219ENST00000528406 TOP2AP11388 1531 aaKnown RBP24.66■■□□□ 1.54
NUP214-219ENST00000528406 RIMBP3CA6NJZ7 1639 aa24.56■■□□□ 1.52
NUP214-219ENST00000528406 RIMBP3BA6NNM3 1639 aa24.56■■□□□ 1.52
NUP214-219ENST00000528406 RIMBP3Q9UFD9 1639 aa24.56■■□□□ 1.52
NUP214-219ENST00000528406 ZNF608Q9ULD9 1512 aaPredicted RBP24.54■■□□□ 1.52
NUP214-219ENST00000528406 PRDM2Q13029 1718 aa24.52■■□□□ 1.52
NUP214-219ENST00000528406 IFT140Q96RY7 1462 aa24.5■■□□□ 1.51
NUP214-219ENST00000528406 CCDC88BA6NC98 1476 aa24.47■■□□□ 1.51
NUP214-219ENST00000528406 CYB5RLQ6IPT4 315 aa24.43■■□□□ 1.5
NUP214-219ENST00000528406 ARHGEF11O15085 1522 aa24.42■■□□□ 1.5
NUP214-219ENST00000528406 TOPBP1Q92547 1522 aa24.41■■□□□ 1.5
NUP214-219ENST00000528406 FBLN2P98095 1184 aa24.34■■□□□ 1.49
NUP214-219ENST00000528406 EIF4G3O43432 1585 aaKnown RBP24.32■■□□□ 1.48
NUP214-219ENST00000528406 ABCC8Q09428 1581 aa24.32■■□□□ 1.48
NUP214-219ENST00000528406 AQRO60306 1485 aaKnown RBP eCLIP24.32■■□□□ 1.481e-9■■■■■ 50.6
NUP214-219ENST00000528406 TRHP20396 242 aaPredicted RBP24.31■■□□□ 1.48
NUP214-219ENST00000528406 DNMBPQ6XZF7 1577 aa24.27■■□□□ 1.48
NUP214-219ENST00000528406 CHD1O14646 1710 aa24.26■■□□□ 1.47
NUP214-219ENST00000528406 TARBP1Q13395 1621 aaKnown RBP24.2■■□□□ 1.46
NUP214-219ENST00000528406 ARAP1Q96P48 1450 aa24.16■■□□□ 1.46
NUP214-219ENST00000528406 POLA1P09884 1462 aaPredicted RBP24.13■■□□□ 1.45
NUP214-219ENST00000528406 RAD54L2Q9Y4B4 1467 aa24.13■■□□□ 1.45
NUP214-219ENST00000528406 TDRD9Q8NDG6 1382 aaKnown RBP24.12■■□□□ 1.45
NUP214-219ENST00000528406 SOGA1O94964 1423 aa24.1■■□□□ 1.45
NUP214-219ENST00000528406 SUPT5HO00267 1087 aaKnown RBP24.06■■□□□ 1.44
NUP214-219ENST00000528406 CHMP7Q8WUX9 453 aaPredicted RBP24.05■■□□□ 1.44
NUP214-219ENST00000528406 SNAPC4Q5SXM2 1469 aa23.99■■□□□ 1.43
NUP214-219ENST00000528406 FGD5Q6ZNL6 1462 aa23.95■■□□□ 1.42
NUP214-219ENST00000528406 CLASP1Q7Z460 1538 aa23.89■■□□□ 1.42
NUP214-219ENST00000528406 SYNJ1O43426 1573 aa23.89■■□□□ 1.41
NUP214-219ENST00000528406 AEBP2Q6ZN18 517 aaPredicted RBP23.88■■□□□ 1.41
NUP214-219ENST00000528406 GRIN2BQ13224 1484 aa23.87■■□□□ 1.41
NUP214-219ENST00000528406 MAGI1Q96QZ7 1491 aaPredicted RBP23.87■■□□□ 1.41
NUP214-219ENST00000528406 CUX1P39880 1505 aa23.85■■□□□ 1.41
NUP214-219ENST00000528406 WDR97A6NE52 1622 aa23.84■■□□□ 1.41
NUP214-219ENST00000528406 SYNJ2O15056 1496 aa23.81■■□□□ 1.4
NUP214-219ENST00000528406 GAPVD1Q14C86 1478 aa23.75■■□□□ 1.39
NUP214-219ENST00000528406 PBRM1Q86U86 1689 aa23.73■■□□□ 1.39
NUP214-219ENST00000528406 ABCA10Q8WWZ4 1543 aa23.62■■□□□ 1.37
NUP214-219ENST00000528406 ABCA5Q8WWZ7 1642 aa23.59■■□□□ 1.37
NUP214-219ENST00000528406 ERCC6L2Q5T890 1561 aa23.59■■□□□ 1.37
NUP214-219ENST00000528406 GRIN2AQ12879 1464 aa23.54■■□□□ 1.36
NUP214-219ENST00000528406 WRNQ14191 1432 aaPredicted RBP eCLIP23.5■■□□□ 1.35
NUP214-219ENST00000528406 CEP170Q5SW79 1584 aa23.49■■□□□ 1.35
NUP214-219ENST00000528406 NUP160Q12769 1436 aa23.45■■□□□ 1.34
NUP214-219ENST00000528406 ADAMTS12P58397 1594 aa23.44■■□□□ 1.34
NUP214-219ENST00000528406 FHAD1B1AJZ9 1412 aa23.42■■□□□ 1.34
NUP214-219ENST00000528406 SHROOM2Q13796 1616 aa23.37■■□□□ 1.33
NUP214-219ENST00000528406 JPH4Q96JJ6 628 aa23.36■■□□□ 1.33
NUP214-219ENST00000528406 PRG4Q92954 1404 aaPredicted RBP23.35■■□□□ 1.33
NUP214-219ENST00000528406 TOP2BQ02880 1626 aa23.35■■□□□ 1.33
NUP214-219ENST00000528406 BIVM-ERCC5R4GMW8 1640 aa23.33■■□□□ 1.33
NUP214-219ENST00000528406 KIF13AQ9H1H9 1805 aa23.33■■□□□ 1.33
NUP214-219ENST00000528406 ERICH3Q5RHP9 1530 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms