RNA–Protein interactions for RNA: ENST00000528367.1

TMEM223-204, Transcript of transmembrane protein 223, humanhuman

TSL 2

Gene TMEM223, Length 857 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM223-204ENST00000528367 NISCHQ9Y2I1 1504 aa45.31■■■■■ 4.84
TMEM223-204ENST00000528367 CCDC180Q9P1Z9 1646 aa40.83■■■■■ 4.13
TMEM223-204ENST00000528367 ABCC9O60706 1549 aa40.66■■■■■ 4.1
TMEM223-204ENST00000528367 RB1CC1Q8TDY2 1594 aa38.79■■■■□ 3.8
TMEM223-204ENST00000528367 NACADO15069 1562 aa38.52■■■■□ 3.76
TMEM223-204ENST00000528367 UNC13AQ9UPW8 1703 aa38.15■■■■□ 3.7
TMEM223-204ENST00000528367 DNAJC5BQ9UF47 199 aa38.12■■■■□ 3.69
TMEM223-204ENST00000528367 DCAF8L2P0C7V8 631 aa38.09■■■■□ 3.69
TMEM223-204ENST00000528367 MYO15BQ96JP2 1530 aa37.96■■■■□ 3.67
TMEM223-204ENST00000528367 PABPN1Q86U42 306 aaKnown RBP eCLIP37.77■■■■□ 3.64
TMEM223-204ENST00000528367 BICRAQ9NZM4 1560 aa37.67■■■■□ 3.62
TMEM223-204ENST00000528367 ZCCHC6Q5VYS8 1495 aaKnown RBP37.54■■■■□ 3.6
TMEM223-204ENST00000528367 DCAF1Q9Y4B6 1507 aa37.46■■■■□ 3.59
TMEM223-204ENST00000528367 SHROOM4Q9ULL8 1493 aa37.14■■■■□ 3.54
TMEM223-204ENST00000528367 SCRIBQ14160 1630 aa37.09■■■■□ 3.53
TMEM223-204ENST00000528367 CC2D2AQ9P2K1 1620 aa36.84■■■■□ 3.49
TMEM223-204ENST00000528367 EIF4G1Q04637 1599 aaKnown RBP36.73■■■■□ 3.47
TMEM223-204ENST00000528367 CECR2Q9BXF3 1484 aa36.65■■■■□ 3.46
TMEM223-204ENST00000528367 NCAPD3P42695 1498 aa35.48■■■■□ 3.27
TMEM223-204ENST00000528367 SMARCA4P51532 1647 aa35.42■■■■□ 3.26
TMEM223-204ENST00000528367 ATAD2BQ9ULI0 1458 aa35.37■■■■□ 3.25
TMEM223-204ENST00000528367 SMARCA2P51531 1590 aa35.33■■■■□ 3.25
TMEM223-204ENST00000528367 HMGXB3Q12766 1538 aa35.28■■■■□ 3.24
TMEM223-204ENST00000528367 BAZ1AQ9NRL2 1556 aaPredicted RBP35.2■■■■□ 3.23
TMEM223-204ENST00000528367 CUX2O14529 1486 aa35.11■■■■□ 3.21
TMEM223-204ENST00000528367 ERCC6Q03468 1493 aa35.11■■■■□ 3.21
TMEM223-204ENST00000528367 PEG3Q9GZU2 1588 aa35.08■■■■□ 3.21
TMEM223-204ENST00000528367 DNAJC5Q9H3Z4 198 aa35.05■■■■□ 3.2
TMEM223-204ENST00000528367 BAZ1BQ9UIG0 1483 aaKnown RBP35.03■■■■□ 3.2
TMEM223-204ENST00000528367 NESP48681 1621 aa34.94■■■■□ 3.18
TMEM223-204ENST00000528367 MROH2BQ7Z745 1585 aa34.9■■■■□ 3.18
TMEM223-204ENST00000528367 LAMC3Q9Y6N6 1575 aa34.78■■■■□ 3.16
TMEM223-204ENST00000528367 THOC2Q8NI27 1593 aaKnown RBP34.7■■■■□ 3.14
TMEM223-204ENST00000528367 KIF21AQ7Z4S6 1674 aa34.67■■■■□ 3.14
TMEM223-204ENST00000528367 WIZO95785 1651 aa34.57■■■■□ 3.12
TMEM223-204ENST00000528367 PDS5BQ9NTI5 1447 aa34.47■■■■□ 3.11
TMEM223-204ENST00000528367 CADPSQ9ULU8 1353 aa34.36■■■■□ 3.09
TMEM223-204ENST00000528367 MRC2Q9UBG0 1479 aa34.2■■■■□ 3.07
TMEM223-204ENST00000528367 WDR62O43379 1518 aa34.18■■■■□ 3.06
TMEM223-204ENST00000528367 RSF1Q96T23 1441 aaPredicted RBP34.12■■■■□ 3.05
TMEM223-204ENST00000528367 TOP2AP11388 1531 aaKnown RBP34.08■■■■□ 3.05
TMEM223-204ENST00000528367 CEP164Q9UPV0 1460 aa34.07■■■■□ 3.04
TMEM223-204ENST00000528367 FANCD2Q9BXW9 1451 aa34.01■■■■□ 3.04
TMEM223-204ENST00000528367 CFTRP13569 1480 aa34.01■■■■□ 3.03
TMEM223-204ENST00000528367 PRDM2Q13029 1718 aa33.99■■■■□ 3.03
TMEM223-204ENST00000528367 URB2Q14146 1524 aaKnown RBP33.75■■■□□ 2.99
TMEM223-204ENST00000528367 CCDC88BA6NC98 1476 aa33.63■■■□□ 2.97
TMEM223-204ENST00000528367 TRIM41Q8WV44 630 aa33.45■■■□□ 2.95
TMEM223-204ENST00000528367 OSCARQ8IYS5 282 aa33.41■■■□□ 2.94
TMEM223-204ENST00000528367 TOPBP1Q92547 1522 aa33.39■■■□□ 2.94
TMEM223-204ENST00000528367 IFT140Q96RY7 1462 aa33.37■■■□□ 2.93
TMEM223-204ENST00000528367 ABCC8Q09428 1581 aa33.33■■■□□ 2.93
TMEM223-204ENST00000528367 ZNF608Q9ULD9 1512 aaPredicted RBP33.32■■■□□ 2.92
TMEM223-204ENST00000528367 DNMBPQ6XZF7 1577 aa33.3■■■□□ 2.92
TMEM223-204ENST00000528367 EIF4G3O43432 1585 aaKnown RBP33.23■■■□□ 2.91
TMEM223-204ENST00000528367 TARBP1Q13395 1621 aaKnown RBP33.17■■■□□ 2.9
TMEM223-204ENST00000528367 RIMBP3CA6NJZ7 1639 aa33.13■■■□□ 2.89
TMEM223-204ENST00000528367 RIMBP3BA6NNM3 1639 aa33.13■■■□□ 2.89
TMEM223-204ENST00000528367 RIMBP3Q9UFD9 1639 aa33.13■■■□□ 2.89
TMEM223-204ENST00000528367 CHD1O14646 1710 aa33.1■■■□□ 2.89
TMEM223-204ENST00000528367 POLA1P09884 1462 aaPredicted RBP33.03■■■□□ 2.88
TMEM223-204ENST00000528367 AQRO60306 1485 aaKnown RBP eCLIP32.99■■■□□ 2.87
TMEM223-204ENST00000528367 ARHGEF11O15085 1522 aa32.97■■■□□ 2.87
TMEM223-204ENST00000528367 RAD54L2Q9Y4B4 1467 aa32.88■■■□□ 2.85
TMEM223-204ENST00000528367 WDR97A6NE52 1622 aa32.86■■■□□ 2.85
TMEM223-204ENST00000528367 SOGA1O94964 1423 aa32.83■■■□□ 2.85
TMEM223-204ENST00000528367 FGD5Q6ZNL6 1462 aa32.82■■■□□ 2.84
TMEM223-204ENST00000528367 CUX1P39880 1505 aa32.81■■■□□ 2.84
TMEM223-204ENST00000528367 TDRD9Q8NDG6 1382 aaKnown RBP32.75■■■□□ 2.83
TMEM223-204ENST00000528367 FBLN2P98095 1184 aa32.71■■■□□ 2.83
TMEM223-204ENST00000528367 SNAPC4Q5SXM2 1469 aa32.68■■■□□ 2.82
TMEM223-204ENST00000528367 PBRM1Q86U86 1689 aa32.66■■■□□ 2.82
TMEM223-204ENST00000528367 MAGI1Q96QZ7 1491 aaPredicted RBP32.62■■■□□ 2.81
TMEM223-204ENST00000528367 CYB5RLQ6IPT4 315 aa32.62■■■□□ 2.81
TMEM223-204ENST00000528367 ARAP1Q96P48 1450 aa32.61■■■□□ 2.81
TMEM223-204ENST00000528367 GRIN2BQ13224 1484 aa32.59■■■□□ 2.81
TMEM223-204ENST00000528367 CLASP1Q7Z460 1538 aa32.58■■■□□ 2.81
TMEM223-204ENST00000528367 SYNJ1O43426 1573 aa32.57■■■□□ 2.8
TMEM223-204ENST00000528367 SYNJ2O15056 1496 aa32.5■■■□□ 2.79
TMEM223-204ENST00000528367 ABCA5Q8WWZ7 1642 aa32.49■■■□□ 2.79
TMEM223-204ENST00000528367 SUPT5HO00267 1087 aaKnown RBP32.49■■■□□ 2.79
TMEM223-204ENST00000528367 CHMP7Q8WUX9 453 aaPredicted RBP32.49■■■□□ 2.79
TMEM223-204ENST00000528367 GAPVD1Q14C86 1478 aa32.48■■■□□ 2.79
TMEM223-204ENST00000528367 ABCA10Q8WWZ4 1543 aa32.46■■■□□ 2.79
TMEM223-204ENST00000528367 BIVM-ERCC5R4GMW8 1640 aa32.37■■■□□ 2.77
TMEM223-204ENST00000528367 TOP2BQ02880 1626 aa32.32■■■□□ 2.76
TMEM223-204ENST00000528367 WRNQ14191 1432 aaPredicted RBP eCLIP32.26■■■□□ 2.76
TMEM223-204ENST00000528367 TRHP20396 242 aaPredicted RBP32.25■■■□□ 2.75
TMEM223-204ENST00000528367 ADAMTS12P58397 1594 aa32.23■■■□□ 2.75
TMEM223-204ENST00000528367 GRIN2AQ12879 1464 aa32.18■■■□□ 2.74
TMEM223-204ENST00000528367 CEP170Q5SW79 1584 aa32.11■■■□□ 2.73
TMEM223-204ENST00000528367 ERICH3Q5RHP9 1530 aa32.07■■■□□ 2.72
TMEM223-204ENST00000528367 NUP160Q12769 1436 aa32.07■■■□□ 2.72
TMEM223-204ENST00000528367 ERCC6L2Q5T890 1561 aa32.05■■■□□ 2.72
TMEM223-204ENST00000528367 SHROOM2Q13796 1616 aa32.04■■■□□ 2.72
TMEM223-204ENST00000528367 FHAD1B1AJZ9 1412 aa32.04■■■□□ 2.72
TMEM223-204ENST00000528367 RUSC2Q8N2Y8 1516 aa31.78■■■□□ 2.68
TMEM223-204ENST00000528367 KIF13AQ9H1H9 1805 aa31.75■■■□□ 2.67
TMEM223-204ENST00000528367 PRG4Q92954 1404 aaPredicted RBP31.73■■■□□ 2.67
TMEM223-204ENST00000528367 CUL7Q14999 1698 aa31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms