RNA–Protein interactions for RNA: ENST00000528318.5

RNF170-207, Transcript of ring finger protein 170, humanhuman

TSL 2

Gene RNF170, Length 1,169 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170-207ENST00000528318 NISCHQ9Y2I1 1504 aa47.57■■■■■ 5.21
RNF170-207ENST00000528318 CCDC180Q9P1Z9 1646 aa42.59■■■■■ 4.41
RNF170-207ENST00000528318 ABCC9O60706 1549 aa42.25■■■■■ 4.35
RNF170-207ENST00000528318 RB1CC1Q8TDY2 1594 aa40.33■■■■■ 4.05
RNF170-207ENST00000528318 NACADO15069 1562 aa40.14■■■■■ 4.02
RNF170-207ENST00000528318 DCAF8L2P0C7V8 631 aa39.81■■■■□ 3.96
RNF170-207ENST00000528318 MYO15BQ96JP2 1530 aa39.71■■■■□ 3.95
RNF170-207ENST00000528318 UNC13AQ9UPW8 1703 aa39.59■■■■□ 3.93
RNF170-207ENST00000528318 ZCCHC6Q5VYS8 1495 aaKnown RBP39.53■■■■□ 3.92
RNF170-207ENST00000528318 DNAJC5BQ9UF47 199 aa39.42■■■■□ 3.9
RNF170-207ENST00000528318 PABPN1Q86U42 306 aaKnown RBP eCLIP39.34■■■■□ 3.89
RNF170-207ENST00000528318 DCAF1Q9Y4B6 1507 aa39.32■■■■□ 3.89
RNF170-207ENST00000528318 BICRAQ9NZM4 1560 aa39.27■■■■□ 3.88
RNF170-207ENST00000528318 SCRIBQ14160 1630 aa38.81■■■■□ 3.8
RNF170-207ENST00000528318 SHROOM4Q9ULL8 1493 aa38.66■■■■□ 3.78
RNF170-207ENST00000528318 CC2D2AQ9P2K1 1620 aa38.23■■■■□ 3.71
RNF170-207ENST00000528318 EIF4G1Q04637 1599 aaKnown RBP38.22■■■■□ 3.71
RNF170-207ENST00000528318 CECR2Q9BXF3 1484 aa38.01■■■■□ 3.67
RNF170-207ENST00000528318 SMARCA4P51532 1647 aa37.07■■■■□ 3.53
RNF170-207ENST00000528318 NCAPD3P42695 1498 aa37.06■■■■□ 3.52
RNF170-207ENST00000528318 ATAD2BQ9ULI0 1458 aa37.01■■■■□ 3.51
RNF170-207ENST00000528318 BAZ1AQ9NRL2 1556 aaPredicted RBP36.88■■■■□ 3.49
RNF170-207ENST00000528318 SMARCA2P51531 1590 aa36.87■■■■□ 3.49
RNF170-207ENST00000528318 HMGXB3Q12766 1538 aa36.84■■■■□ 3.49
RNF170-207ENST00000528318 PEG3Q9GZU2 1588 aa36.73■■■■□ 3.47
RNF170-207ENST00000528318 MROH2BQ7Z745 1585 aa36.69■■■■□ 3.46
RNF170-207ENST00000528318 BAZ1BQ9UIG0 1483 aaKnown RBP36.62■■■■□ 3.45
RNF170-207ENST00000528318 NESP48681 1621 aa36.43■■■■□ 3.42
RNF170-207ENST00000528318 ERCC6Q03468 1493 aa36.37■■■■□ 3.41
RNF170-207ENST00000528318 WIZO95785 1651 aa36.27■■■■□ 3.4
RNF170-207ENST00000528318 CUX2O14529 1486 aa36.27■■■■□ 3.4
RNF170-207ENST00000528318 LAMC3Q9Y6N6 1575 aa36.18■■■■□ 3.38
RNF170-207ENST00000528318 THOC2Q8NI27 1593 aaKnown RBP36.04■■■■□ 3.36
RNF170-207ENST00000528318 RSF1Q96T23 1441 aaPredicted RBP36■■■■□ 3.35
RNF170-207ENST00000528318 KIF21AQ7Z4S6 1674 aa36■■■■□ 3.35
RNF170-207ENST00000528318 CADPSQ9ULU8 1353 aa35.91■■■■□ 3.34
RNF170-207ENST00000528318 DNAJC5Q9H3Z4 198 aa35.88■■■■□ 3.33
RNF170-207ENST00000528318 PDS5BQ9NTI5 1447 aa35.88■■■■□ 3.33
RNF170-207ENST00000528318 TOP2AP11388 1531 aaKnown RBP35.81■■■■□ 3.32
RNF170-207ENST00000528318 MRC2Q9UBG0 1479 aa35.62■■■■□ 3.29
RNF170-207ENST00000528318 CFTRP13569 1480 aa35.61■■■■□ 3.29
RNF170-207ENST00000528318 WDR62O43379 1518 aa35.57■■■■□ 3.29
RNF170-207ENST00000528318 FANCD2Q9BXW9 1451 aa35.53■■■■□ 3.28
RNF170-207ENST00000528318 CEP164Q9UPV0 1460 aa35.52■■■■□ 3.28
RNF170-207ENST00000528318 CCDC88BA6NC98 1476 aa35.38■■■■□ 3.25
RNF170-207ENST00000528318 PRDM2Q13029 1718 aa35.35■■■■□ 3.25
RNF170-207ENST00000528318 URB2Q14146 1524 aaKnown RBP35.27■■■■□ 3.24
RNF170-207ENST00000528318 TOPBP1Q92547 1522 aa34.91■■■■□ 3.18
RNF170-207ENST00000528318 DNMBPQ6XZF7 1577 aa34.81■■■■□ 3.16
RNF170-207ENST00000528318 IFT140Q96RY7 1462 aa34.8■■■■□ 3.16
RNF170-207ENST00000528318 ZNF608Q9ULD9 1512 aaPredicted RBP34.79■■■■□ 3.16
RNF170-207ENST00000528318 ABCC8Q09428 1581 aa34.77■■■■□ 3.16
RNF170-207ENST00000528318 TARBP1Q13395 1621 aaKnown RBP34.63■■■■□ 3.13
RNF170-207ENST00000528318 EIF4G3O43432 1585 aaKnown RBP34.62■■■■□ 3.13
RNF170-207ENST00000528318 POLA1P09884 1462 aaPredicted RBP34.58■■■■□ 3.13
RNF170-207ENST00000528318 OSCARQ8IYS5 282 aa34.57■■■■□ 3.12
RNF170-207ENST00000528318 SUPT5HO00267 1087 aaKnown RBP34.49■■■■□ 3.11
RNF170-207ENST00000528318 AQRO60306 1485 aaKnown RBP eCLIP34.46■■■■□ 3.11
RNF170-207ENST00000528318 CUX1P39880 1505 aa34.45■■■■□ 3.11
RNF170-207ENST00000528318 RAD54L2Q9Y4B4 1467 aa34.45■■■■□ 3.1
RNF170-207ENST00000528318 FGD5Q6ZNL6 1462 aa34.39■■■■□ 3.1
RNF170-207ENST00000528318 TRIM41Q8WV44 630 aa34.37■■■■□ 3.09
RNF170-207ENST00000528318 SOGA1O94964 1423 aa34.35■■■■□ 3.09
RNF170-207ENST00000528318 CHD1O14646 1710 aa34.32■■■■□ 3.08
RNF170-207ENST00000528318 TDRD9Q8NDG6 1382 aaKnown RBP34.26■■■■□ 3.08
RNF170-207ENST00000528318 RIMBP3CA6NJZ7 1639 aa34.25■■■■□ 3.07
RNF170-207ENST00000528318 RIMBP3BA6NNM3 1639 aa34.25■■■■□ 3.07
RNF170-207ENST00000528318 RIMBP3Q9UFD9 1639 aa34.25■■■■□ 3.07
RNF170-207ENST00000528318 WDR97A6NE52 1622 aa34.24■■■■□ 3.07
RNF170-207ENST00000528318 ARHGEF11O15085 1522 aa34.14■■■■□ 3.06
RNF170-207ENST00000528318 SNAPC4Q5SXM2 1469 aa34.14■■■■□ 3.06
RNF170-207ENST00000528318 GRIN2BQ13224 1484 aa34.05■■■■□ 3.04
RNF170-207ENST00000528318 MAGI1Q96QZ7 1491 aaPredicted RBP34.03■■■■□ 3.04
RNF170-207ENST00000528318 FBLN2P98095 1184 aa34.03■■■■□ 3.04
RNF170-207ENST00000528318 ABCA10Q8WWZ4 1543 aa34.03■■■■□ 3.04
RNF170-207ENST00000528318 PBRM1Q86U86 1689 aa34.02■■■■□ 3.04
RNF170-207ENST00000528318 ABCA5Q8WWZ7 1642 aa34.01■■■■□ 3.03
RNF170-207ENST00000528318 BIVM-ERCC5R4GMW8 1640 aa33.99■■■■□ 3.03
RNF170-207ENST00000528318 SYNJ1O43426 1573 aa33.97■■■■□ 3.03
RNF170-207ENST00000528318 TOP2BQ02880 1626 aa33.97■■■■□ 3.03
RNF170-207ENST00000528318 GAPVD1Q14C86 1478 aa33.96■■■■□ 3.03
RNF170-207ENST00000528318 CLASP1Q7Z460 1538 aa33.94■■■■□ 3.02
RNF170-207ENST00000528318 SYNJ2O15056 1496 aa33.91■■■■□ 3.02
RNF170-207ENST00000528318 WRNQ14191 1432 aaPredicted RBP eCLIP33.91■■■■□ 3.02
RNF170-207ENST00000528318 ARAP1Q96P48 1450 aa33.86■■■■□ 3.01
RNF170-207ENST00000528318 CHMP7Q8WUX9 453 aaPredicted RBP33.85■■■■□ 3.01
RNF170-207ENST00000528318 CYB5RLQ6IPT4 315 aa33.75■■■□□ 2.99
RNF170-207ENST00000528318 ADAMTS12P58397 1594 aa33.72■■■□□ 2.99
RNF170-207ENST00000528318 GRIN2AQ12879 1464 aa33.64■■■□□ 2.98
RNF170-207ENST00000528318 ERICH3Q5RHP9 1530 aa33.58■■■□□ 2.97
RNF170-207ENST00000528318 CEP170Q5SW79 1584 aa33.56■■■□□ 2.96
RNF170-207ENST00000528318 FHAD1B1AJZ9 1412 aa33.54■■■□□ 2.96
RNF170-207ENST00000528318 NUP160Q12769 1436 aa33.54■■■□□ 2.96
RNF170-207ENST00000528318 ERCC6L2Q5T890 1561 aa33.46■■■□□ 2.95
RNF170-207ENST00000528318 SHROOM2Q13796 1616 aa33.4■■■□□ 2.94
RNF170-207ENST00000528318 RUSC2Q8N2Y8 1516 aa33.24■■■□□ 2.91
RNF170-207ENST00000528318 IGF1RP08069 1367 aa33.21■■■□□ 2.91
RNF170-207ENST00000528318 KIF27Q86VH2 1401 aa33.21■■■□□ 2.91
RNF170-207ENST00000528318 TRHP20396 242 aaPredicted RBP33.21■■■□□ 2.91
RNF170-207ENST00000528318 CUL7Q14999 1698 aa33.17■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms