RNA–Protein interactions for RNA: ENST00000528298.5

MS4A3-206, Transcript of membrane spanning 4-domains A3, humanhuman

TSL 3

Gene MS4A3, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3-206ENST00000528298 NISCHQ9Y2I1 1504 aa28.45■■■□□ 2.15
MS4A3-206ENST00000528298 CCDC180Q9P1Z9 1646 aa25.33■■□□□ 1.65
MS4A3-206ENST00000528298 ABCC9O60706 1549 aa24.89■■□□□ 1.57
MS4A3-206ENST00000528298 RB1CC1Q8TDY2 1594 aa23.94■■□□□ 1.42
MS4A3-206ENST00000528298 NACADO15069 1562 aa23.9■■□□□ 1.42
MS4A3-206ENST00000528298 DCAF8L2P0C7V8 631 aa23.89■■□□□ 1.41
MS4A3-206ENST00000528298 MYO15BQ96JP2 1530 aa23.74■■□□□ 1.39
MS4A3-206ENST00000528298 ZCCHC6Q5VYS8 1495 aaKnown RBP23.62■■□□□ 1.37
MS4A3-206ENST00000528298 DCAF1Q9Y4B6 1507 aa23.58■■□□□ 1.36
MS4A3-206ENST00000528298 UNC13AQ9UPW8 1703 aa23.3■■□□□ 1.32
MS4A3-206ENST00000528298 PABPN1Q86U42 306 aaKnown RBP eCLIP23.28■■□□□ 1.32
MS4A3-206ENST00000528298 BICRAQ9NZM4 1560 aa23.16■■□□□ 1.3
MS4A3-206ENST00000528298 SCRIBQ14160 1630 aa23.02■■□□□ 1.28
MS4A3-206ENST00000528298 DNAJC5BQ9UF47 199 aa23.02■■□□□ 1.28
MS4A3-206ENST00000528298 SHROOM4Q9ULL8 1493 aa22.99■■□□□ 1.27
MS4A3-206ENST00000528298 EIF4G1Q04637 1599 aaKnown RBP22.57■■□□□ 1.2
MS4A3-206ENST00000528298 CC2D2AQ9P2K1 1620 aa22.51■■□□□ 1.19
MS4A3-206ENST00000528298 CECR2Q9BXF3 1484 aa22.41■■□□□ 1.18
MS4A3-206ENST00000528298 NCAPD3P42695 1498 aa22.08■■□□□ 1.12
MS4A3-206ENST00000528298 BAZ1AQ9NRL2 1556 aaPredicted RBP22.07■■□□□ 1.12
MS4A3-206ENST00000528298 SMARCA4P51532 1647 aa22.06■■□□□ 1.12
MS4A3-206ENST00000528298 ATAD2BQ9ULI0 1458 aa22.02■■□□□ 1.12
MS4A3-206ENST00000528298 SMARCA2P51531 1590 aa22■■□□□ 1.11
MS4A3-206ENST00000528298 PEG3Q9GZU2 1588 aa21.89■■□□□ 1.09
MS4A3-206ENST00000528298 HMGXB3Q12766 1538 aa21.89■■□□□ 1.09
MS4A3-206ENST00000528298 MROH2BQ7Z745 1585 aa21.88■■□□□ 1.09
MS4A3-206ENST00000528298 AEBP2Q6ZN18 517 aaPredicted RBP21.86■■□□□ 1.09
MS4A3-206ENST00000528298 BAZ1BQ9UIG0 1483 aaKnown RBP21.82■■□□□ 1.08
MS4A3-206ENST00000528298 RSF1Q96T23 1441 aaPredicted RBP21.63■■□□□ 1.05
MS4A3-206ENST00000528298 WIZO95785 1651 aa21.62■■□□□ 1.05
MS4A3-206ENST00000528298 ERCC6Q03468 1493 aa21.5■■□□□ 1.03
MS4A3-206ENST00000528298 NESP48681 1621 aa21.48■■□□□ 1.03
MS4A3-206ENST00000528298 LAMC3Q9Y6N6 1575 aa21.48■■□□□ 1.03
MS4A3-206ENST00000528298 CADPSQ9ULU8 1353 aa21.43■■□□□ 1.02
MS4A3-206ENST00000528298 TOP2AP11388 1531 aaKnown RBP21.41■■□□□ 1.02
MS4A3-206ENST00000528298 PDS5BQ9NTI5 1447 aa21.38■■□□□ 1.01
MS4A3-206ENST00000528298 CUX2O14529 1486 aa21.35■■□□□ 1.01
MS4A3-206ENST00000528298 CFTRP13569 1480 aa21.25■□□□□ 0.99
MS4A3-206ENST00000528298 KIF21AQ7Z4S6 1674 aa21.21■□□□□ 0.99
MS4A3-206ENST00000528298 CCDC88BA6NC98 1476 aa21.19■□□□□ 0.98
MS4A3-206ENST00000528298 THOC2Q8NI27 1593 aaKnown RBP21.16■□□□□ 0.98
MS4A3-206ENST00000528298 FANCD2Q9BXW9 1451 aa21.13■□□□□ 0.97
MS4A3-206ENST00000528298 MRC2Q9UBG0 1479 aa21.11■□□□□ 0.97
MS4A3-206ENST00000528298 CEP164Q9UPV0 1460 aa21.11■□□□□ 0.97
MS4A3-206ENST00000528298 WDR62O43379 1518 aa21.02■□□□□ 0.96
MS4A3-206ENST00000528298 PRDM2Q13029 1718 aa21.01■□□□□ 0.95
MS4A3-206ENST00000528298 SUPT5HO00267 1087 aaKnown RBP21■□□□□ 0.95
MS4A3-206ENST00000528298 DNAJC5Q9H3Z4 198 aa20.92■□□□□ 0.94
MS4A3-206ENST00000528298 URB2Q14146 1524 aaKnown RBP20.89■□□□□ 0.94
MS4A3-206ENST00000528298 ABCC8Q09428 1581 aa20.85■□□□□ 0.93
MS4A3-206ENST00000528298 TOPBP1Q92547 1522 aa20.76■□□□□ 0.91
MS4A3-206ENST00000528298 DNMBPQ6XZF7 1577 aa20.72■□□□□ 0.91
MS4A3-206ENST00000528298 IFT140Q96RY7 1462 aa20.7■□□□□ 0.9
MS4A3-206ENST00000528298 POLA1P09884 1462 aaPredicted RBP20.57■□□□□ 0.88
MS4A3-206ENST00000528298 ZNF608Q9ULD9 1512 aaPredicted RBP20.55■□□□□ 0.88
MS4A3-206ENST00000528298 SOGA1O94964 1423 aa20.54■□□□□ 0.88
MS4A3-206ENST00000528298 TARBP1Q13395 1621 aaKnown RBP20.53■□□□□ 0.88
MS4A3-206ENST00000528298 OSCARQ8IYS5 282 aa20.53■□□□□ 0.88
MS4A3-206ENST00000528298 CUX1P39880 1505 aa20.53■□□□□ 0.88
MS4A3-206ENST00000528298 FGD5Q6ZNL6 1462 aa20.5■□□□□ 0.87
MS4A3-206ENST00000528298 AQRO60306 1485 aaKnown RBP eCLIP20.47■□□□□ 0.87
MS4A3-206ENST00000528298 RAD54L2Q9Y4B4 1467 aa20.47■□□□□ 0.87
MS4A3-206ENST00000528298 EIF4G3O43432 1585 aaKnown RBP20.44■□□□□ 0.86
MS4A3-206ENST00000528298 TDRD9Q8NDG6 1382 aaKnown RBP20.42■□□□□ 0.86
MS4A3-206ENST00000528298 WDR97A6NE52 1622 aa20.42■□□□□ 0.86
MS4A3-206ENST00000528298 WRNQ14191 1432 aaPredicted RBP eCLIP20.4■□□□□ 0.86
MS4A3-206ENST00000528298 CHIC1Q5VXU3 224 aa20.35■□□□□ 0.85
MS4A3-206ENST00000528298 TOP2BQ02880 1626 aa20.35■□□□□ 0.85
MS4A3-206ENST00000528298 ABCA10Q8WWZ4 1543 aa20.32■□□□□ 0.84
MS4A3-206ENST00000528298 BIVM-ERCC5R4GMW8 1640 aa20.32■□□□□ 0.84
MS4A3-206ENST00000528298 GRIN2BQ13224 1484 aa20.3■□□□□ 0.84
MS4A3-206ENST00000528298 FBLN2P98095 1184 aa20.3■□□□□ 0.84
MS4A3-206ENST00000528298 GAPVD1Q14C86 1478 aa20.28■□□□□ 0.84
MS4A3-206ENST00000528298 SYNJ1O43426 1573 aa20.27■□□□□ 0.84
MS4A3-206ENST00000528298 CHMP7Q8WUX9 453 aaPredicted RBP20.26■□□□□ 0.83
MS4A3-206ENST00000528298 MAGI1Q96QZ7 1491 aaPredicted RBP20.25■□□□□ 0.83
MS4A3-206ENST00000528298 SNAPC4Q5SXM2 1469 aa20.23■□□□□ 0.83
MS4A3-206ENST00000528298 CHD1O14646 1710 aa20.21■□□□□ 0.83
MS4A3-206ENST00000528298 ABCA5Q8WWZ7 1642 aa20.2■□□□□ 0.82
MS4A3-206ENST00000528298 SYNJ2O15056 1496 aa20.18■□□□□ 0.82
MS4A3-206ENST00000528298 PBRM1Q86U86 1689 aa20.16■□□□□ 0.82
MS4A3-206ENST00000528298 TRIM41Q8WV44 630 aa20.1■□□□□ 0.81
MS4A3-206ENST00000528298 ERICH3Q5RHP9 1530 aa20.09■□□□□ 0.81
MS4A3-206ENST00000528298 ARHGEF11O15085 1522 aa20.07■□□□□ 0.8
MS4A3-206ENST00000528298 FHAD1B1AJZ9 1412 aa20.06■□□□□ 0.8
MS4A3-206ENST00000528298 RIMBP3CA6NJZ7 1639 aa20.05■□□□□ 0.8
MS4A3-206ENST00000528298 RIMBP3BA6NNM3 1639 aa20.05■□□□□ 0.8
MS4A3-206ENST00000528298 RIMBP3Q9UFD9 1639 aa20.05■□□□□ 0.8
MS4A3-206ENST00000528298 CLASP1Q7Z460 1538 aa20.02■□□□□ 0.79
MS4A3-206ENST00000528298 KIF27Q86VH2 1401 aa20.02■□□□□ 0.79
MS4A3-206ENST00000528298 GRIN2AQ12879 1464 aa20.01■□□□□ 0.79
MS4A3-206ENST00000528298 ADAMTS12P58397 1594 aa20■□□□□ 0.79
MS4A3-206ENST00000528298 CYB5RLQ6IPT4 315 aa19.97■□□□□ 0.79
MS4A3-206ENST00000528298 IGF1RP08069 1367 aa19.96■□□□□ 0.79
MS4A3-206ENST00000528298 NUP160Q12769 1436 aa19.94■□□□□ 0.78
MS4A3-206ENST00000528298 ARAP1Q96P48 1450 aa19.87■□□□□ 0.77
MS4A3-206ENST00000528298 CEP170Q5SW79 1584 aa19.87■□□□□ 0.77
MS4A3-206ENST00000528298 CUL7Q14999 1698 aa19.85■□□□□ 0.77
MS4A3-206ENST00000528298 CARMIL1Q5VZK9 1371 aa19.83■□□□□ 0.77
MS4A3-206ENST00000528298 JPH4Q96JJ6 628 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms