RNA–Protein interactions for RNA: ENST00000528284.1

PPFIA1-210, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 4

Gene PPFIA1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-210ENST00000528284 NISCHQ9Y2I1 1504 aa42.71■■■■■ 4.43
PPFIA1-210ENST00000528284 CCDC180Q9P1Z9 1646 aa38.16■■■■□ 3.7
PPFIA1-210ENST00000528284 ABCC9O60706 1549 aa37.99■■■■□ 3.67
PPFIA1-210ENST00000528284 RB1CC1Q8TDY2 1594 aa36.26■■■■□ 3.39
PPFIA1-210ENST00000528284 DCAF8L2P0C7V8 631 aa36.12■■■■□ 3.37
PPFIA1-210ENST00000528284 NACADO15069 1562 aa36.07■■■■□ 3.37
PPFIA1-210ENST00000528284 MYO15BQ96JP2 1530 aa35.63■■■■□ 3.29
PPFIA1-210ENST00000528284 PABPN1Q86U42 306 aaKnown RBP eCLIP35.47■■■■□ 3.27
PPFIA1-210ENST00000528284 ZCCHC6Q5VYS8 1495 aaKnown RBP35.43■■■■□ 3.26
PPFIA1-210ENST00000528284 DNAJC5BQ9UF47 199 aa35.41■■■■□ 3.26
PPFIA1-210ENST00000528284 UNC13AQ9UPW8 1703 aa35.33■■■■□ 3.25
PPFIA1-210ENST00000528284 DCAF1Q9Y4B6 1507 aa35.27■■■■□ 3.24
PPFIA1-210ENST00000528284 BICRAQ9NZM4 1560 aa35.13■■■■□ 3.21
PPFIA1-210ENST00000528284 SCRIBQ14160 1630 aa34.82■■■■□ 3.16
PPFIA1-210ENST00000528284 SHROOM4Q9ULL8 1493 aa34.71■■■■□ 3.15
PPFIA1-210ENST00000528284 CC2D2AQ9P2K1 1620 aa34.29■■■■□ 3.08
PPFIA1-210ENST00000528284 EIF4G1Q04637 1599 aaKnown RBP34.28■■■■□ 3.08
PPFIA1-210ENST00000528284 CECR2Q9BXF3 1484 aa34.2■■■■□ 3.06
PPFIA1-210ENST00000528284 NCAPD3P42695 1498 aa33.31■■■□□ 2.92
PPFIA1-210ENST00000528284 ATAD2BQ9ULI0 1458 aa33.25■■■□□ 2.91
PPFIA1-210ENST00000528284 SMARCA4P51532 1647 aa33.24■■■□□ 2.91
PPFIA1-210ENST00000528284 SMARCA2P51531 1590 aa33.16■■■□□ 2.9
PPFIA1-210ENST00000528284 BAZ1AQ9NRL2 1556 aaPredicted RBP33.15■■■□□ 2.9
PPFIA1-210ENST00000528284 HMGXB3Q12766 1538 aa33.04■■■□□ 2.88
PPFIA1-210ENST00000528284 BAZ1BQ9UIG0 1483 aaKnown RBP32.95■■■□□ 2.87
PPFIA1-210ENST00000528284 MROH2BQ7Z745 1585 aa32.91■■■□□ 2.86
PPFIA1-210ENST00000528284 PEG3Q9GZU2 1588 aa32.89■■■□□ 2.86
PPFIA1-210ENST00000528284 ERCC6Q03468 1493 aa32.81■■■□□ 2.84
PPFIA1-210ENST00000528284 NESP48681 1621 aa32.68■■■□□ 2.82
PPFIA1-210ENST00000528284 CUX2O14529 1486 aa32.61■■■□□ 2.81
PPFIA1-210ENST00000528284 WIZO95785 1651 aa32.51■■■□□ 2.79
PPFIA1-210ENST00000528284 LAMC3Q9Y6N6 1575 aa32.49■■■□□ 2.79
PPFIA1-210ENST00000528284 PDS5BQ9NTI5 1447 aa32.36■■■□□ 2.77
PPFIA1-210ENST00000528284 DNAJC5Q9H3Z4 198 aa32.36■■■□□ 2.77
PPFIA1-210ENST00000528284 RSF1Q96T23 1441 aaPredicted RBP32.35■■■□□ 2.77
PPFIA1-210ENST00000528284 CADPSQ9ULU8 1353 aa32.34■■■□□ 2.77
PPFIA1-210ENST00000528284 THOC2Q8NI27 1593 aaKnown RBP32.24■■■□□ 2.75
PPFIA1-210ENST00000528284 KIF21AQ7Z4S6 1674 aa32.22■■■□□ 2.75
PPFIA1-210ENST00000528284 TOP2AP11388 1531 aaKnown RBP32.13■■■□□ 2.73
PPFIA1-210ENST00000528284 MRC2Q9UBG0 1479 aa32.03■■■□□ 2.72
PPFIA1-210ENST00000528284 CFTRP13569 1480 aa31.99■■■□□ 2.71
PPFIA1-210ENST00000528284 FANCD2Q9BXW9 1451 aa31.96■■■□□ 2.71
PPFIA1-210ENST00000528284 CEP164Q9UPV0 1460 aa31.96■■■□□ 2.71
PPFIA1-210ENST00000528284 WDR62O43379 1518 aa31.9■■■□□ 2.7
PPFIA1-210ENST00000528284 CCDC88BA6NC98 1476 aa31.8■■■□□ 2.68
PPFIA1-210ENST00000528284 URB2Q14146 1524 aaKnown RBP31.64■■■□□ 2.66
PPFIA1-210ENST00000528284 PRDM2Q13029 1718 aa31.6■■■□□ 2.65
PPFIA1-210ENST00000528284 TOPBP1Q92547 1522 aa31.36■■■□□ 2.61
PPFIA1-210ENST00000528284 ABCC8Q09428 1581 aa31.35■■■□□ 2.61
PPFIA1-210ENST00000528284 IFT140Q96RY7 1462 aa31.32■■■□□ 2.6
PPFIA1-210ENST00000528284 OSCARQ8IYS5 282 aa31.28■■■□□ 2.6
PPFIA1-210ENST00000528284 DNMBPQ6XZF7 1577 aa31.26■■■□□ 2.59
PPFIA1-210ENST00000528284 SUPT5HO00267 1087 aaKnown RBP31.24■■■□□ 2.59
PPFIA1-210ENST00000528284 ZNF608Q9ULD9 1512 aaPredicted RBP31.22■■■□□ 2.59
PPFIA1-210ENST00000528284 TRIM41Q8WV44 630 aa31.1■■■□□ 2.57
PPFIA1-210ENST00000528284 POLA1P09884 1462 aaPredicted RBP31.06■■■□□ 2.56
PPFIA1-210ENST00000528284 TARBP1Q13395 1621 aaKnown RBP31.02■■■□□ 2.56
PPFIA1-210ENST00000528284 EIF4G3O43432 1585 aaKnown RBP31.01■■■□□ 2.56
PPFIA1-210ENST00000528284 AQRO60306 1485 aaKnown RBP eCLIP31.01■■■□□ 2.55
PPFIA1-210ENST00000528284 SOGA1O94964 1423 aa30.98■■■□□ 2.55
PPFIA1-210ENST00000528284 RAD54L2Q9Y4B4 1467 aa30.96■■■□□ 2.55
PPFIA1-210ENST00000528284 FGD5Q6ZNL6 1462 aa30.91■■■□□ 2.54
PPFIA1-210ENST00000528284 CUX1P39880 1505 aa30.9■■■□□ 2.54
PPFIA1-210ENST00000528284 TDRD9Q8NDG6 1382 aaKnown RBP30.88■■■□□ 2.53
PPFIA1-210ENST00000528284 FBLN2P98095 1184 aa30.85■■■□□ 2.53
PPFIA1-210ENST00000528284 WDR97A6NE52 1622 aa30.73■■■□□ 2.51
PPFIA1-210ENST00000528284 CHD1O14646 1710 aa30.73■■■□□ 2.51
PPFIA1-210ENST00000528284 RIMBP3CA6NJZ7 1639 aa30.7■■■□□ 2.51
PPFIA1-210ENST00000528284 RIMBP3BA6NNM3 1639 aa30.7■■■□□ 2.51
PPFIA1-210ENST00000528284 RIMBP3Q9UFD9 1639 aa30.7■■■□□ 2.51
PPFIA1-210ENST00000528284 SNAPC4Q5SXM2 1469 aa30.67■■■□□ 2.5
PPFIA1-210ENST00000528284 ARHGEF11O15085 1522 aa30.66■■■□□ 2.5
PPFIA1-210ENST00000528284 GRIN2BQ13224 1484 aa30.65■■■□□ 2.5
PPFIA1-210ENST00000528284 CHMP7Q8WUX9 453 aaPredicted RBP30.65■■■□□ 2.5
PPFIA1-210ENST00000528284 MAGI1Q96QZ7 1491 aaPredicted RBP30.61■■■□□ 2.49
PPFIA1-210ENST00000528284 GAPVD1Q14C86 1478 aa30.58■■■□□ 2.49
PPFIA1-210ENST00000528284 ABCA10Q8WWZ4 1543 aa30.57■■■□□ 2.48
PPFIA1-210ENST00000528284 WRNQ14191 1432 aaPredicted RBP eCLIP30.55■■■□□ 2.48
PPFIA1-210ENST00000528284 CYB5RLQ6IPT4 315 aa30.53■■■□□ 2.48
PPFIA1-210ENST00000528284 SYNJ2O15056 1496 aa30.5■■■□□ 2.47
PPFIA1-210ENST00000528284 TOP2BQ02880 1626 aa30.47■■■□□ 2.47
PPFIA1-210ENST00000528284 PBRM1Q86U86 1689 aa30.46■■■□□ 2.47
PPFIA1-210ENST00000528284 SYNJ1O43426 1573 aa30.45■■■□□ 2.46
PPFIA1-210ENST00000528284 ABCA5Q8WWZ7 1642 aa30.44■■■□□ 2.46
PPFIA1-210ENST00000528284 BIVM-ERCC5R4GMW8 1640 aa30.44■■■□□ 2.46
PPFIA1-210ENST00000528284 CLASP1Q7Z460 1538 aa30.39■■■□□ 2.46
PPFIA1-210ENST00000528284 ARAP1Q96P48 1450 aa30.37■■■□□ 2.45
PPFIA1-210ENST00000528284 GRIN2AQ12879 1464 aa30.24■■■□□ 2.43
PPFIA1-210ENST00000528284 FHAD1B1AJZ9 1412 aa30.21■■■□□ 2.43
PPFIA1-210ENST00000528284 ADAMTS12P58397 1594 aa30.2■■■□□ 2.43
PPFIA1-210ENST00000528284 ERICH3Q5RHP9 1530 aa30.19■■■□□ 2.42
PPFIA1-210ENST00000528284 TRHP20396 242 aaPredicted RBP30.14■■■□□ 2.42
PPFIA1-210ENST00000528284 NUP160Q12769 1436 aa30.12■■■□□ 2.41
PPFIA1-210ENST00000528284 CEP170Q5SW79 1584 aa30.07■■■□□ 2.4
PPFIA1-210ENST00000528284 KIF27Q86VH2 1401 aa29.96■■■□□ 2.39
PPFIA1-210ENST00000528284 ERCC6L2Q5T890 1561 aa29.94■■■□□ 2.38
PPFIA1-210ENST00000528284 IGF1RP08069 1367 aa29.91■■■□□ 2.38
PPFIA1-210ENST00000528284 JPH4Q96JJ6 628 aa29.91■■■□□ 2.38
PPFIA1-210ENST00000528284 SHROOM2Q13796 1616 aa29.9■■■□□ 2.38
PPFIA1-210ENST00000528284 PRG4Q92954 1404 aaPredicted RBP29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms