RNA–Protein interactions for RNA: ENST00000528276.1

CHEK1-210, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 1,814 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-210ENST00000528276 NISCHQ9Y2I1 1504 aa31.56■■■□□ 2.64
CHEK1-210ENST00000528276 CCDC180Q9P1Z9 1646 aa27.38■■□□□ 1.97
CHEK1-210ENST00000528276 ZCCHC6Q5VYS8 1495 aaKnown RBP26.52■■□□□ 1.84
CHEK1-210ENST00000528276 DCAF8L2P0C7V8 631 aa26.33■■□□□ 1.81
CHEK1-210ENST00000528276 DCAF1Q9Y4B6 1507 aa26.06■■□□□ 1.76
CHEK1-210ENST00000528276 SHROOM4Q9ULL8 1493 aa25.99■■□□□ 1.75
CHEK1-210ENST00000528276 ABCC9O60706 1549 aa25.96■■□□□ 1.75
CHEK1-210ENST00000528276 MYO15BQ96JP2 1530 aa25.71■■□□□ 1.71
CHEK1-210ENST00000528276 NACADO15069 1562 aa25.56■■□□□ 1.68
CHEK1-210ENST00000528276 RB1CC1Q8TDY2 1594 aa25.34■■□□□ 1.65
CHEK1-210ENST00000528276 SCRIBQ14160 1630 aa25.3■■□□□ 1.64
CHEK1-210ENST00000528276 SUPT5HO00267 1087 aaKnown RBP25.14■■□□□ 1.61
CHEK1-210ENST00000528276 UNC13AQ9UPW8 1703 aa24.62■■□□□ 1.53
CHEK1-210ENST00000528276 PABPN1Q86U42 306 aaKnown RBP eCLIP24.57■■□□□ 1.52
CHEK1-210ENST00000528276 RSF1Q96T23 1441 aaPredicted RBP24.56■■□□□ 1.52
CHEK1-210ENST00000528276 CECR2Q9BXF3 1484 aa24.52■■□□□ 1.52
CHEK1-210ENST00000528276 BICRAQ9NZM4 1560 aa24.45■■□□□ 1.51
CHEK1-210ENST00000528276 BAZ1AQ9NRL2 1556 aaPredicted RBP24.39■■□□□ 1.5
CHEK1-210ENST00000528276 MROH2BQ7Z745 1585 aa24.38■■□□□ 1.49
CHEK1-210ENST00000528276 SMARCA4P51532 1647 aa24.21■■□□□ 1.47
CHEK1-210ENST00000528276 WIZO95785 1651 aa24.16■■□□□ 1.46
CHEK1-210ENST00000528276 CHIC1Q5VXU3 224 aa24.01■■□□□ 1.43
CHEK1-210ENST00000528276 TOP2AP11388 1531 aaKnown RBP23.95■■□□□ 1.42
CHEK1-210ENST00000528276 PEG3Q9GZU2 1588 aa23.87■■□□□ 1.41
CHEK1-210ENST00000528276 SMARCA2P51531 1590 aa23.84■■□□□ 1.41
CHEK1-210ENST00000528276 ATAD2BQ9ULI0 1458 aa23.84■■□□□ 1.41
CHEK1-210ENST00000528276 EIF4G1Q04637 1599 aaKnown RBP23.79■■□□□ 1.4
CHEK1-210ENST00000528276 BAZ1BQ9UIG0 1483 aaKnown RBP23.76■■□□□ 1.39
CHEK1-210ENST00000528276 CCDC88BA6NC98 1476 aa23.75■■□□□ 1.39
CHEK1-210ENST00000528276 TRIM41Q8WV44 630 aa23.63■■□□□ 1.37
CHEK1-210ENST00000528276 NCAPD3P42695 1498 aa23.61■■□□□ 1.37
CHEK1-210ENST00000528276 HMGXB3Q12766 1538 aa23.55■■□□□ 1.36
CHEK1-210ENST00000528276 CC2D2AQ9P2K1 1620 aa23.41■■□□□ 1.34
CHEK1-210ENST00000528276 ABCC8Q09428 1581 aa23.26■■□□□ 1.31
CHEK1-210ENST00000528276 FAM9AQ8IZU1 332 aaPredicted RBP23.21■■□□□ 1.31
CHEK1-210ENST00000528276 WRNQ14191 1432 aaPredicted RBP eCLIP23.17■■□□□ 1.3
CHEK1-210ENST00000528276 LOC105371045A0A1W2PR82 267 aa23.14■■□□□ 1.29
CHEK1-210ENST00000528276 CFTRP13569 1480 aa23.12■■□□□ 1.29
CHEK1-210ENST00000528276 CADPSQ9ULU8 1353 aa23.08■■□□□ 1.28
CHEK1-210ENST00000528276 SYNJ1O43426 1573 aa22.96■■□□□ 1.27
CHEK1-210ENST00000528276 EHMT2Q96KQ7 1210 aa22.92■■□□□ 1.26
CHEK1-210ENST00000528276 EEA1Q15075 1411 aa22.91■■□□□ 1.26
CHEK1-210ENST00000528276 SOGA1O94964 1423 aa22.9■■□□□ 1.26
CHEK1-210ENST00000528276 TOP2BQ02880 1626 aa22.86■■□□□ 1.25
CHEK1-210ENST00000528276 PRDM2Q13029 1718 aa22.83■■□□□ 1.25
CHEK1-210ENST00000528276 CSRNP3Q8WYN3 585 aa22.83■■□□□ 1.25
CHEK1-210ENST00000528276 FANCD2Q9BXW9 1451 aa22.8■■□□□ 1.24
CHEK1-210ENST00000528276 DNAJC5BQ9UF47 199 aa22.8■■□□□ 1.24
CHEK1-210ENST00000528276 BIVM-ERCC5R4GMW8 1640 aa22.79■■□□□ 1.24
CHEK1-210ENST00000528276 CUX1P39880 1505 aa22.79■■□□□ 1.24
CHEK1-210ENST00000528276 LAMC3Q9Y6N6 1575 aa22.78■■□□□ 1.24
CHEK1-210ENST00000528276 NESP48681 1621 aa22.77■■□□□ 1.24
CHEK1-210ENST00000528276 RUSC2Q8N2Y8 1516 aa22.76■■□□□ 1.23
CHEK1-210ENST00000528276 PDS5BQ9NTI5 1447 aa22.7■■□□□ 1.22
CHEK1-210ENST00000528276 CEP164Q9UPV0 1460 aa22.66■■□□□ 1.22
CHEK1-210ENST00000528276 UBTFP17480 764 aaKnown RBP22.64■■□□□ 1.22
CHEK1-210ENST00000528276 KIF27Q86VH2 1401 aa22.61■■□□□ 1.21
CHEK1-210ENST00000528276 GOLGA3Q08378 1498 aa22.59■■□□□ 1.21
CHEK1-210ENST00000528276 FGD5Q6ZNL6 1462 aa22.57■■□□□ 1.2
CHEK1-210ENST00000528276 DNMBPQ6XZF7 1577 aa22.56■■□□□ 1.2
CHEK1-210ENST00000528276 TNIKQ9UKE5 1360 aa22.54■■□□□ 1.2
CHEK1-210ENST00000528276 TOPBP1Q92547 1522 aa22.53■■□□□ 1.2
CHEK1-210ENST00000528276 KIF21BO75037 1637 aa22.5■■□□□ 1.19
CHEK1-210ENST00000528276 CUX2O14529 1486 aa22.5■■□□□ 1.19
CHEK1-210ENST00000528276 URB2Q14146 1524 aaKnown RBP22.45■■□□□ 1.18
CHEK1-210ENST00000528276 POLA1P09884 1462 aaPredicted RBP22.43■■□□□ 1.18
CHEK1-210ENST00000528276 CEP162Q5TB80 1403 aa22.43■■□□□ 1.18
CHEK1-210ENST00000528276 RAPGEF2Q9Y4G8 1499 aa22.41■■□□□ 1.18
CHEK1-210ENST00000528276 KIF21AQ7Z4S6 1674 aa22.4■■□□□ 1.18
CHEK1-210ENST00000528276 PRXQ9BXM0 1461 aa22.39■■□□□ 1.17
CHEK1-210ENST00000528276 RAD54L2Q9Y4B4 1467 aa22.39■■□□□ 1.17
CHEK1-210ENST00000528276 ERICH3Q5RHP9 1530 aa22.36■■□□□ 1.17
CHEK1-210ENST00000528276 ABCA10Q8WWZ4 1543 aa22.35■■□□□ 1.17
CHEK1-210ENST00000528276 IGF1RP08069 1367 aa22.35■■□□□ 1.17
CHEK1-210ENST00000528276 MRC2Q9UBG0 1479 aa22.34■■□□□ 1.17
CHEK1-210ENST00000528276 ERCC6Q03468 1493 aa22.33■■□□□ 1.16
CHEK1-210ENST00000528276 CARMIL1Q5VZK9 1371 aa22.28■■□□□ 1.16
CHEK1-210ENST00000528276 PCGF6Q9BYE7 350 aa22.27■■□□□ 1.16
CHEK1-210ENST00000528276 RANGAP1P46060 587 aaPredicted RBP22.27■■□□□ 1.15
CHEK1-210ENST00000528276 CLIP1P30622 1438 aa22.26■■□□□ 1.15
CHEK1-210ENST00000528276 TRIM26Q12899 539 aaPredicted RBP22.23■■□□□ 1.15
CHEK1-210ENST00000528276 TDRD9Q8NDG6 1382 aaKnown RBP22.21■■□□□ 1.15
CHEK1-210ENST00000528276 GAPVD1Q14C86 1478 aa22.16■■□□□ 1.14
CHEK1-210ENST00000528276 WDR62O43379 1518 aa22.15■■□□□ 1.14
CHEK1-210ENST00000528276 WDR97A6NE52 1622 aa22.13■■□□□ 1.13
CHEK1-210ENST00000528276 TARBP1Q13395 1621 aaKnown RBP22.11■■□□□ 1.13
CHEK1-210ENST00000528276 PPARGC1BQ86YN6 1023 aaKnown RBP22.1■■□□□ 1.13
CHEK1-210ENST00000528276 IFT140Q96RY7 1462 aa22.1■■□□□ 1.13
CHEK1-210ENST00000528276 CUL7Q14999 1698 aa22.09■■□□□ 1.13
CHEK1-210ENST00000528276 ABCA5Q8WWZ7 1642 aa22.09■■□□□ 1.13
CHEK1-210ENST00000528276 APLP2Q06481 763 aa22.06■■□□□ 1.12
CHEK1-210ENST00000528276 VPS8Q8N3P4 1428 aa22.05■■□□□ 1.12
CHEK1-210ENST00000528276 AQRO60306 1485 aaKnown RBP eCLIP22.02■■□□□ 1.12
CHEK1-210ENST00000528276 THOC2Q8NI27 1593 aaKnown RBP22.01■■□□□ 1.11
CHEK1-210ENST00000528276 GRIN2BQ13224 1484 aa21.98■■□□□ 1.11
CHEK1-210ENST00000528276 TTBK1Q5TCY1 1321 aaPredicted RBP21.96■■□□□ 1.11
CHEK1-210ENST00000528276 FHAD1B1AJZ9 1412 aa21.93■■□□□ 1.1
CHEK1-210ENST00000528276 ZNF608Q9ULD9 1512 aaPredicted RBP21.93■■□□□ 1.1
CHEK1-210ENST00000528276 ARAP1Q96P48 1450 aa21.93■■□□□ 1.1
CHEK1-210ENST00000528276 ARHGAP35Q9NRY4 1499 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms