RNA–Protein interactions for RNA: ENST00000528258.5

ZNF250-206, Transcript of zinc finger protein 250, humanhuman

TSL 5

Gene ZNF250, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-206ENST00000528258 NISCHQ9Y2I1 1504 aa40.24■■■■■ 4.03
ZNF250-206ENST00000528258 ABCC9O60706 1549 aa36.54■■■■□ 3.44
ZNF250-206ENST00000528258 CCDC180Q9P1Z9 1646 aa36.27■■■■□ 3.4
ZNF250-206ENST00000528258 RB1CC1Q8TDY2 1594 aa34.63■■■■□ 3.13
ZNF250-206ENST00000528258 DNAJC5BQ9UF47 199 aa34.57■■■■□ 3.12
ZNF250-206ENST00000528258 NACADO15069 1562 aa34.32■■■■□ 3.09
ZNF250-206ENST00000528258 DCAF8L2P0C7V8 631 aa34.03■■■■□ 3.04
ZNF250-206ENST00000528258 UNC13AQ9UPW8 1703 aa34.01■■■■□ 3.03
ZNF250-206ENST00000528258 PABPN1Q86U42 306 aaKnown RBP eCLIP33.95■■■■□ 3.03
ZNF250-206ENST00000528258 MYO15BQ96JP2 1530 aa33.73■■■□□ 2.99
ZNF250-206ENST00000528258 BICRAQ9NZM4 1560 aa33.71■■■□□ 2.99
ZNF250-206ENST00000528258 ZCCHC6Q5VYS8 1495 aaKnown RBP33.29■■■□□ 2.92
ZNF250-206ENST00000528258 DCAF1Q9Y4B6 1507 aa33.2■■■□□ 2.91
ZNF250-206ENST00000528258 SHROOM4Q9ULL8 1493 aa33.11■■■□□ 2.89
ZNF250-206ENST00000528258 SCRIBQ14160 1630 aa33.04■■■□□ 2.88
ZNF250-206ENST00000528258 CC2D2AQ9P2K1 1620 aa33.02■■■□□ 2.88
ZNF250-206ENST00000528258 CECR2Q9BXF3 1484 aa32.93■■■□□ 2.86
ZNF250-206ENST00000528258 EIF4G1Q04637 1599 aaKnown RBP32.87■■■□□ 2.85
ZNF250-206ENST00000528258 DNAJC5Q9H3Z4 198 aa31.9■■■□□ 2.7
ZNF250-206ENST00000528258 NCAPD3P42695 1498 aa31.68■■■□□ 2.66
ZNF250-206ENST00000528258 CUX2O14529 1486 aa31.58■■■□□ 2.65
ZNF250-206ENST00000528258 ATAD2BQ9ULI0 1458 aa31.55■■■□□ 2.64
ZNF250-206ENST00000528258 ERCC6Q03468 1493 aa31.52■■■□□ 2.64
ZNF250-206ENST00000528258 SMARCA4P51532 1647 aa31.49■■■□□ 2.63
ZNF250-206ENST00000528258 HMGXB3Q12766 1538 aa31.44■■■□□ 2.62
ZNF250-206ENST00000528258 SMARCA2P51531 1590 aa31.43■■■□□ 2.62
ZNF250-206ENST00000528258 NESP48681 1621 aa31.34■■■□□ 2.61
ZNF250-206ENST00000528258 BAZ1AQ9NRL2 1556 aaPredicted RBP31.24■■■□□ 2.59
ZNF250-206ENST00000528258 BAZ1BQ9UIG0 1483 aaKnown RBP31.22■■■□□ 2.59
ZNF250-206ENST00000528258 PEG3Q9GZU2 1588 aa31.17■■■□□ 2.58
ZNF250-206ENST00000528258 THOC2Q8NI27 1593 aaKnown RBP31.09■■■□□ 2.57
ZNF250-206ENST00000528258 LAMC3Q9Y6N6 1575 aa31.04■■■□□ 2.56
ZNF250-206ENST00000528258 MROH2BQ7Z745 1585 aa31.03■■■□□ 2.56
ZNF250-206ENST00000528258 KIF21AQ7Z4S6 1674 aa30.98■■■□□ 2.55
ZNF250-206ENST00000528258 PDS5BQ9NTI5 1447 aa30.81■■■□□ 2.52
ZNF250-206ENST00000528258 CADPSQ9ULU8 1353 aa30.68■■■□□ 2.5
ZNF250-206ENST00000528258 WIZO95785 1651 aa30.68■■■□□ 2.5
ZNF250-206ENST00000528258 MRC2Q9UBG0 1479 aa30.6■■■□□ 2.49
ZNF250-206ENST00000528258 WDR62O43379 1518 aa30.57■■■□□ 2.48
ZNF250-206ENST00000528258 CEP164Q9UPV0 1460 aa30.41■■■□□ 2.46
ZNF250-206ENST00000528258 TRIM41Q8WV44 630 aa30.38■■■□□ 2.45
ZNF250-206ENST00000528258 FANCD2Q9BXW9 1451 aa30.36■■■□□ 2.45
ZNF250-206ENST00000528258 CFTRP13569 1480 aa30.3■■■□□ 2.44
ZNF250-206ENST00000528258 RSF1Q96T23 1441 aaPredicted RBP30.24■■■□□ 2.43
ZNF250-206ENST00000528258 TOP2AP11388 1531 aaKnown RBP30.21■■■□□ 2.43
ZNF250-206ENST00000528258 URB2Q14146 1524 aaKnown RBP30.17■■■□□ 2.42
ZNF250-206ENST00000528258 PRDM2Q13029 1718 aa30.08■■■□□ 2.41
ZNF250-206ENST00000528258 OSCARQ8IYS5 282 aa30.05■■■□□ 2.4
ZNF250-206ENST00000528258 CCDC88BA6NC98 1476 aa29.87■■■□□ 2.37
ZNF250-206ENST00000528258 ZNF608Q9ULD9 1512 aaPredicted RBP29.85■■■□□ 2.37
ZNF250-206ENST00000528258 RIMBP3CA6NJZ7 1639 aa29.81■■■□□ 2.36
ZNF250-206ENST00000528258 RIMBP3BA6NNM3 1639 aa29.81■■■□□ 2.36
ZNF250-206ENST00000528258 RIMBP3Q9UFD9 1639 aa29.81■■■□□ 2.36
ZNF250-206ENST00000528258 IFT140Q96RY7 1462 aa29.8■■■□□ 2.36
ZNF250-206ENST00000528258 TOPBP1Q92547 1522 aa29.77■■■□□ 2.36
ZNF250-206ENST00000528258 EIF4G3O43432 1585 aaKnown RBP29.69■■■□□ 2.34
ZNF250-206ENST00000528258 ARHGEF11O15085 1522 aa29.65■■■□□ 2.34
ZNF250-206ENST00000528258 DNMBPQ6XZF7 1577 aa29.64■■■□□ 2.33
ZNF250-206ENST00000528258 ABCC8Q09428 1581 aa29.63■■■□□ 2.33
ZNF250-206ENST00000528258 TARBP1Q13395 1621 aaKnown RBP29.57■■■□□ 2.32
ZNF250-206ENST00000528258 CHD1O14646 1710 aa29.57■■■□□ 2.32
ZNF250-206ENST00000528258 AQRO60306 1485 aaKnown RBP eCLIP29.51■■■□□ 2.315e-7■■■■■ 45.6
ZNF250-206ENST00000528258 POLA1P09884 1462 aaPredicted RBP29.44■■■□□ 2.3
ZNF250-206ENST00000528258 CYB5RLQ6IPT4 315 aa29.4■■■□□ 2.3
ZNF250-206ENST00000528258 RAD54L2Q9Y4B4 1467 aa29.36■■■□□ 2.29
ZNF250-206ENST00000528258 ARAP1Q96P48 1450 aa29.34■■■□□ 2.29
ZNF250-206ENST00000528258 FBLN2P98095 1184 aa29.32■■■□□ 2.28
ZNF250-206ENST00000528258 SOGA1O94964 1423 aa29.27■■■□□ 2.28
ZNF250-206ENST00000528258 TDRD9Q8NDG6 1382 aaKnown RBP29.26■■■□□ 2.28
ZNF250-206ENST00000528258 FGD5Q6ZNL6 1462 aa29.22■■■□□ 2.27
ZNF250-206ENST00000528258 SNAPC4Q5SXM2 1469 aa29.2■■■□□ 2.26
ZNF250-206ENST00000528258 WDR97A6NE52 1622 aa29.19■■■□□ 2.26
ZNF250-206ENST00000528258 CUX1P39880 1505 aa29.17■■■□□ 2.26
ZNF250-206ENST00000528258 CLASP1Q7Z460 1538 aa29.16■■■□□ 2.26
ZNF250-206ENST00000528258 TRHP20396 242 aaPredicted RBP29.15■■■□□ 2.26
ZNF250-206ENST00000528258 MAGI1Q96QZ7 1491 aaPredicted RBP29.09■■■□□ 2.25
ZNF250-206ENST00000528258 SYNJ1O43426 1573 aa29.08■■■□□ 2.25
ZNF250-206ENST00000528258 GRIN2BQ13224 1484 aa29.05■■■□□ 2.24
ZNF250-206ENST00000528258 CHMP7Q8WUX9 453 aaPredicted RBP29.05■■■□□ 2.24
ZNF250-206ENST00000528258 PBRM1Q86U86 1689 aa29.02■■■□□ 2.24
ZNF250-206ENST00000528258 SYNJ2O15056 1496 aa29■■■□□ 2.23
ZNF250-206ENST00000528258 GAPVD1Q14C86 1478 aa28.92■■■□□ 2.22
ZNF250-206ENST00000528258 ABCA5Q8WWZ7 1642 aa28.89■■■□□ 2.22
ZNF250-206ENST00000528258 ABCA10Q8WWZ4 1543 aa28.86■■■□□ 2.21
ZNF250-206ENST00000528258 ERCC6L2Q5T890 1561 aa28.72■■■□□ 2.19
ZNF250-206ENST00000528258 GRIN2AQ12879 1464 aa28.71■■■□□ 2.19
ZNF250-206ENST00000528258 ADAMTS12P58397 1594 aa28.68■■■□□ 2.18
ZNF250-206ENST00000528258 CEP170Q5SW79 1584 aa28.66■■■□□ 2.18
ZNF250-206ENST00000528258 WRNQ14191 1432 aaPredicted RBP eCLIP28.65■■■□□ 2.18
ZNF250-206ENST00000528258 SUPT5HO00267 1087 aaKnown RBP28.64■■■□□ 2.18
ZNF250-206ENST00000528258 BIVM-ERCC5R4GMW8 1640 aa28.64■■■□□ 2.18
ZNF250-206ENST00000528258 TOP2BQ02880 1626 aa28.61■■■□□ 2.17
ZNF250-206ENST00000528258 NUP160Q12769 1436 aa28.61■■■□□ 2.17
ZNF250-206ENST00000528258 SHROOM2Q13796 1616 aa28.58■■■□□ 2.17
ZNF250-206ENST00000528258 FHAD1B1AJZ9 1412 aa28.52■■■□□ 2.16
ZNF250-206ENST00000528258 ERICH3Q5RHP9 1530 aa28.48■■■□□ 2.15
ZNF250-206ENST00000528258 AEBP2Q6ZN18 517 aaPredicted RBP28.48■■■□□ 2.15
ZNF250-206ENST00000528258 KIF13AQ9H1H9 1805 aa28.42■■■□□ 2.14
ZNF250-206ENST00000528258 PRG4Q92954 1404 aaPredicted RBP28.35■■■□□ 2.13
ZNF250-206ENST00000528258 RUSC2Q8N2Y8 1516 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms