RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 NISCHQ9Y2I1 1504 aa64.75■■■■■ 7.96
TRIM3-206ENST00000528227 CCDC180Q9P1Z9 1646 aa58.07■■■■■ 6.89
TRIM3-206ENST00000528227 ABCC9O60706 1549 aa57.86■■■■■ 6.85
TRIM3-206ENST00000528227 RB1CC1Q8TDY2 1594 aa55.17■■■■■ 6.42
TRIM3-206ENST00000528227 NACADO15069 1562 aa54.84■■■■■ 6.37
TRIM3-206ENST00000528227 DCAF8L2P0C7V8 631 aa54.5■■■■■ 6.32
TRIM3-206ENST00000528227 MYO15BQ96JP2 1530 aa54.16■■■■■ 6.26
TRIM3-206ENST00000528227 DNAJC5BQ9UF47 199 aa54.13■■■■■ 6.26
TRIM3-206ENST00000528227 UNC13AQ9UPW8 1703 aa53.95■■■■■ 6.23
TRIM3-206ENST00000528227 PABPN1Q86U42 306 aaKnown RBP eCLIP53.87■■■■■ 6.21
TRIM3-206ENST00000528227 ZCCHC6Q5VYS8 1495 aaKnown RBP53.71■■■■■ 6.19
TRIM3-206ENST00000528227 BICRAQ9NZM4 1560 aa53.58■■■■■ 6.17
TRIM3-206ENST00000528227 DCAF1Q9Y4B6 1507 aa53.52■■■■■ 6.16
TRIM3-206ENST00000528227 SCRIBQ14160 1630 aa52.89■■■■■ 6.06
TRIM3-206ENST00000528227 SHROOM4Q9ULL8 1493 aa52.88■■■■■ 6.06
TRIM3-206ENST00000528227 CC2D2AQ9P2K1 1620 aa52.3■■■■■ 5.96
TRIM3-206ENST00000528227 EIF4G1Q04637 1599 aaKnown RBP52.24■■■■■ 5.95
TRIM3-206ENST00000528227 CECR2Q9BXF3 1484 aa52.12■■■■■ 5.93
TRIM3-206ENST00000528227 NCAPD3P42695 1498 aa50.62■■■■■ 5.69
TRIM3-206ENST00000528227 SMARCA4P51532 1647 aa50.49■■■■■ 5.67
TRIM3-206ENST00000528227 ATAD2BQ9ULI0 1458 aa50.48■■■■■ 5.67
TRIM3-206ENST00000528227 SMARCA2P51531 1590 aa50.36■■■■■ 5.65
TRIM3-206ENST00000528227 HMGXB3Q12766 1538 aa50.28■■■■■ 5.64
TRIM3-206ENST00000528227 BAZ1AQ9NRL2 1556 aaPredicted RBP50.26■■■■■ 5.64
TRIM3-206ENST00000528227 PEG3Q9GZU2 1588 aa50.02■■■■■ 5.6
TRIM3-206ENST00000528227 BAZ1BQ9UIG0 1483 aaKnown RBP50■■■■■ 5.59
TRIM3-206ENST00000528227 ERCC6Q03468 1493 aa49.94■■■■■ 5.58
TRIM3-206ENST00000528227 MROH2BQ7Z745 1585 aa49.9■■■■■ 5.58
TRIM3-206ENST00000528227 CUX2O14529 1486 aa49.83■■■■■ 5.57
TRIM3-206ENST00000528227 NESP48681 1621 aa49.76■■■■■ 5.56
TRIM3-206ENST00000528227 DNAJC5Q9H3Z4 198 aa49.59■■■■■ 5.53
TRIM3-206ENST00000528227 LAMC3Q9Y6N6 1575 aa49.46■■■■■ 5.51
TRIM3-206ENST00000528227 WIZO95785 1651 aa49.31■■■■■ 5.48
TRIM3-206ENST00000528227 THOC2Q8NI27 1593 aaKnown RBP49.26■■■■■ 5.48
TRIM3-206ENST00000528227 KIF21AQ7Z4S6 1674 aa49.15■■■■■ 5.46
TRIM3-206ENST00000528227 PDS5BQ9NTI5 1447 aa49.14■■■■■ 5.46
TRIM3-206ENST00000528227 CADPSQ9ULU8 1353 aa49.08■■■■■ 5.45
TRIM3-206ENST00000528227 RSF1Q96T23 1441 aaPredicted RBP48.92■■■■■ 5.42
TRIM3-206ENST00000528227 MRC2Q9UBG0 1479 aa48.74■■■■■ 5.39
TRIM3-206ENST00000528227 TOP2AP11388 1531 aaKnown RBP48.71■■■■■ 5.39
TRIM3-206ENST00000528227 WDR62O43379 1518 aa48.63■■■■■ 5.37
TRIM3-206ENST00000528227 CFTRP13569 1480 aa48.57■■■■■ 5.37
TRIM3-206ENST00000528227 CEP164Q9UPV0 1460 aa48.56■■■■■ 5.36
TRIM3-206ENST00000528227 FANCD2Q9BXW9 1451 aa48.52■■■■■ 5.36
TRIM3-206ENST00000528227 CCDC88BA6NC98 1476 aa48.13■■■■■ 5.3
TRIM3-206ENST00000528227 PRDM2Q13029 1718 aa48.12■■■■■ 5.29
TRIM3-206ENST00000528227 URB2Q14146 1524 aaKnown RBP48.12■■■■■ 5.29
TRIM3-206ENST00000528227 TOPBP1Q92547 1522 aa47.63■■■■■ 5.22
TRIM3-206ENST00000528227 IFT140Q96RY7 1462 aa47.59■■■■■ 5.21
TRIM3-206ENST00000528227 OSCARQ8IYS5 282 aa47.54■■■■■ 5.2
TRIM3-206ENST00000528227 ABCC8Q09428 1581 aa47.54■■■■■ 5.2
TRIM3-206ENST00000528227 ZNF608Q9ULD9 1512 aaPredicted RBP47.5■■■■■ 5.19
TRIM3-206ENST00000528227 DNMBPQ6XZF7 1577 aa47.48■■■■■ 5.19
TRIM3-206ENST00000528227 TRIM41Q8WV44 630 aa47.45■■■■■ 5.19
TRIM3-206ENST00000528227 EIF4G3O43432 1585 aaKnown RBP47.26■■■■■ 5.16
TRIM3-206ENST00000528227 TARBP1Q13395 1621 aaKnown RBP47.22■■■■■ 5.15
TRIM3-206ENST00000528227 POLA1P09884 1462 aaPredicted RBP47.15■■■■■ 5.14
TRIM3-206ENST00000528227 AQRO60306 1485 aaKnown RBP eCLIP47.08■■■■■ 5.136e-6■■■■□ 25.1
TRIM3-206ENST00000528227 RAD54L2Q9Y4B4 1467 aa46.96■■■■■ 5.11
TRIM3-206ENST00000528227 RIMBP3CA6NJZ7 1639 aa46.95■■■■■ 5.11
TRIM3-206ENST00000528227 RIMBP3BA6NNM3 1639 aa46.95■■■■■ 5.11
TRIM3-206ENST00000528227 RIMBP3Q9UFD9 1639 aa46.95■■■■■ 5.11
TRIM3-206ENST00000528227 SOGA1O94964 1423 aa46.92■■■■■ 5.1
TRIM3-206ENST00000528227 CHD1O14646 1710 aa46.88■■■■■ 5.1
TRIM3-206ENST00000528227 FGD5Q6ZNL6 1462 aa46.88■■■■■ 5.09
TRIM3-206ENST00000528227 CUX1P39880 1505 aa46.87■■■■■ 5.09
TRIM3-206ENST00000528227 ARHGEF11O15085 1522 aa46.81■■■■■ 5.08
TRIM3-206ENST00000528227 SUPT5HO00267 1087 aaKnown RBP46.8■■■■■ 5.08
TRIM3-206ENST00000528227 TDRD9Q8NDG6 1382 aaKnown RBP46.8■■■■■ 5.08
TRIM3-206ENST00000528227 WDR97A6NE52 1622 aa46.76■■■■■ 5.08
TRIM3-206ENST00000528227 FBLN2P98095 1184 aa46.69■■■■■ 5.06
TRIM3-206ENST00000528227 SNAPC4Q5SXM2 1469 aa46.62■■■■■ 5.05
TRIM3-206ENST00000528227 GRIN2BQ13224 1484 aa46.51■■■■■ 5.04
TRIM3-206ENST00000528227 MAGI1Q96QZ7 1491 aaPredicted RBP46.51■■■■■ 5.04
TRIM3-206ENST00000528227 CYB5RLQ6IPT4 315 aa46.41■■■■■ 5.02
TRIM3-206ENST00000528227 CHMP7Q8WUX9 453 aaPredicted RBP46.39■■■■■ 5.02
TRIM3-206ENST00000528227 ABCA10Q8WWZ4 1543 aa46.37■■■■■ 5.01
TRIM3-206ENST00000528227 GAPVD1Q14C86 1478 aa46.37■■■■■ 5.01
TRIM3-206ENST00000528227 ARAP1Q96P48 1450 aa46.37■■■■■ 5.01
TRIM3-206ENST00000528227 PBRM1Q86U86 1689 aa46.36■■■■■ 5.01
TRIM3-206ENST00000528227 CLASP1Q7Z460 1538 aa46.36■■■■■ 5.01
TRIM3-206ENST00000528227 SYNJ2O15056 1496 aa46.35■■■■■ 5.01
TRIM3-206ENST00000528227 SYNJ1O43426 1573 aa46.33■■■■■ 5.01
TRIM3-206ENST00000528227 ABCA5Q8WWZ7 1642 aa46.3■■■■■ 5
TRIM3-206ENST00000528227 WRNQ14191 1432 aaPredicted RBP eCLIP46.19■■■■■ 4.98
TRIM3-206ENST00000528227 BIVM-ERCC5R4GMW8 1640 aa46.18■■■■■ 4.98
TRIM3-206ENST00000528227 TOP2BQ02880 1626 aa46.17■■■■■ 4.98
TRIM3-206ENST00000528227 ADAMTS12P58397 1594 aa45.93■■■■■ 4.94
TRIM3-206ENST00000528227 GRIN2AQ12879 1464 aa45.92■■■■■ 4.94
TRIM3-206ENST00000528227 TRHP20396 242 aaPredicted RBP45.83■■■■■ 4.93
TRIM3-206ENST00000528227 ERICH3Q5RHP9 1530 aa45.79■■■■■ 4.92
TRIM3-206ENST00000528227 FHAD1B1AJZ9 1412 aa45.78■■■■■ 4.92
TRIM3-206ENST00000528227 NUP160Q12769 1436 aa45.77■■■■■ 4.92
TRIM3-206ENST00000528227 CEP170Q5SW79 1584 aa45.76■■■■■ 4.92
TRIM3-206ENST00000528227 ERCC6L2Q5T890 1561 aa45.63■■■■■ 4.9
TRIM3-206ENST00000528227 SHROOM2Q13796 1616 aa45.57■■■■■ 4.89
TRIM3-206ENST00000528227 PRG4Q92954 1404 aaPredicted RBP45.29■■■■■ 4.84
TRIM3-206ENST00000528227 RUSC2Q8N2Y8 1516 aa45.29■■■■■ 4.84
TRIM3-206ENST00000528227 JPH4Q96JJ6 628 aa45.26■■■■■ 4.84
TRIM3-206ENST00000528227 KIF27Q86VH2 1401 aa45.25■■■■■ 4.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms