RNA–Protein interactions for RNA: ENST00000528129.5

PDE4DIP-226, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 5

Gene PDE4DIP, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-226ENST00000528129 NISCHQ9Y2I1 1504 aa18.96■□□□□ 0.63
PDE4DIP-226ENST00000528129 ABCC9O60706 1549 aa18.08■□□□□ 0.49
PDE4DIP-226ENST00000528129 DNAJC5BQ9UF47 199 aa17.77■□□□□ 0.44
PDE4DIP-226ENST00000528129 CCDC180Q9P1Z9 1646 aa17.24■□□□□ 0.35
PDE4DIP-226ENST00000528129 RB1CC1Q8TDY2 1594 aa16.8■□□□□ 0.28
PDE4DIP-226ENST00000528129 PABPN1Q86U42 306 aaKnown RBP eCLIP16.78■□□□□ 0.28
PDE4DIP-226ENST00000528129 DNAJC5Q9H3Z4 198 aa16.77■□□□□ 0.28
PDE4DIP-226ENST00000528129 NACADO15069 1562 aa16.51■□□□□ 0.23
PDE4DIP-226ENST00000528129 UNC13AQ9UPW8 1703 aa16.46■□□□□ 0.23
PDE4DIP-226ENST00000528129 BICRAQ9NZM4 1560 aa16.43■□□□□ 0.22
PDE4DIP-226ENST00000528129 DCAF8L2P0C7V8 631 aa16.37■□□□□ 0.21
PDE4DIP-226ENST00000528129 CECR2Q9BXF3 1484 aa16.35■□□□□ 0.21
PDE4DIP-226ENST00000528129 CC2D2AQ9P2K1 1620 aa16.27■□□□□ 0.19
PDE4DIP-226ENST00000528129 EIF4G1Q04637 1599 aaKnown RBP16.04■□□□□ 0.16
PDE4DIP-226ENST00000528129 MYO15BQ96JP2 1530 aa16.04■□□□□ 0.16
PDE4DIP-226ENST00000528129 SHROOM4Q9ULL8 1493 aa16■□□□□ 0.15
PDE4DIP-226ENST00000528129 CUX2O14529 1486 aa15.82■□□□□ 0.12
PDE4DIP-226ENST00000528129 SCRIBQ14160 1630 aa15.73■□□□□ 0.11
PDE4DIP-226ENST00000528129 ZCCHC6Q5VYS8 1495 aaKnown RBP15.71■□□□□ 0.1
PDE4DIP-226ENST00000528129 TRIM41Q8WV44 630 aa15.7■□□□□ 0.1
PDE4DIP-226ENST00000528129 ERCC6Q03468 1493 aa15.6■□□□□ 0.09
PDE4DIP-226ENST00000528129 DCAF1Q9Y4B6 1507 aa15.57■□□□□ 0.08
PDE4DIP-226ENST00000528129 NESP48681 1621 aa15.35■□□□□ 0.05
PDE4DIP-226ENST00000528129 NCAPD3P42695 1498 aa15.31■□□□□ 0.04
PDE4DIP-226ENST00000528129 THOC2Q8NI27 1593 aaKnown RBP15.28■□□□□ 0.04
PDE4DIP-226ENST00000528129 ATAD2BQ9ULI0 1458 aa15.17■□□□□ 0.02
PDE4DIP-226ENST00000528129 SMARCA2P51531 1590 aa15.12■□□□□ 0.01
PDE4DIP-226ENST00000528129 HMGXB3Q12766 1538 aa15.07■□□□□ 0
PDE4DIP-226ENST00000528129 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
PDE4DIP-226ENST00000528129 OSCARQ8IYS5 282 aa15.03■□□□□ -0
PDE4DIP-226ENST00000528129 LAMC3Q9Y6N6 1575 aa15.02□□□□□ -0.01
PDE4DIP-226ENST00000528129 BAZ1AQ9NRL2 1556 aaPredicted RBP15□□□□□ -0.01
PDE4DIP-226ENST00000528129 PDS5BQ9NTI5 1447 aa14.98□□□□□ -0.01
PDE4DIP-226ENST00000528129 BAZ1BQ9UIG0 1483 aaKnown RBP14.93□□□□□ -0.02
PDE4DIP-226ENST00000528129 SMARCA4P51532 1647 aa14.92□□□□□ -0.02
PDE4DIP-226ENST00000528129 MRC2Q9UBG0 1479 aa14.9□□□□□ -0.02
PDE4DIP-226ENST00000528129 RIMBP3CA6NJZ7 1639 aa14.9□□□□□ -0.02
PDE4DIP-226ENST00000528129 RIMBP3BA6NNM3 1639 aa14.9□□□□□ -0.02
PDE4DIP-226ENST00000528129 RIMBP3Q9UFD9 1639 aa14.9□□□□□ -0.02
PDE4DIP-226ENST00000528129 WDR62O43379 1518 aa14.89□□□□□ -0.03
PDE4DIP-226ENST00000528129 AEBP2Q6ZN18 517 aaPredicted RBP14.87□□□□□ -0.03
PDE4DIP-226ENST00000528129 CADPSQ9ULU8 1353 aa14.82□□□□□ -0.04
PDE4DIP-226ENST00000528129 TRHP20396 242 aaPredicted RBP14.8□□□□□ -0.04
PDE4DIP-226ENST00000528129 PEG3Q9GZU2 1588 aa14.78□□□□□ -0.04
PDE4DIP-226ENST00000528129 ARHGEF11O15085 1522 aa14.78□□□□□ -0.04
PDE4DIP-226ENST00000528129 CYB5RLQ6IPT4 315 aa14.77□□□□□ -0.05
PDE4DIP-226ENST00000528129 CEP164Q9UPV0 1460 aa14.68□□□□□ -0.06
PDE4DIP-226ENST00000528129 MROH2BQ7Z745 1585 aa14.64□□□□□ -0.07
PDE4DIP-226ENST00000528129 SUPT5HO00267 1087 aaKnown RBP14.63□□□□□ -0.07
PDE4DIP-226ENST00000528129 FANCD2Q9BXW9 1451 aa14.63□□□□□ -0.07
PDE4DIP-226ENST00000528129 ARAP1Q96P48 1450 aa14.61□□□□□ -0.07
PDE4DIP-226ENST00000528129 URB2Q14146 1524 aaKnown RBP14.6□□□□□ -0.07
PDE4DIP-226ENST00000528129 ZNF608Q9ULD9 1512 aaPredicted RBP14.56□□□□□ -0.08
PDE4DIP-226ENST00000528129 RSF1Q96T23 1441 aaPredicted RBP14.52□□□□□ -0.08
PDE4DIP-226ENST00000528129 CFTRP13569 1480 aa14.48□□□□□ -0.09
PDE4DIP-226ENST00000528129 ILDR1Q86SU0 546 aaPredicted RBP14.46□□□□□ -0.09
PDE4DIP-226ENST00000528129 IFT140Q96RY7 1462 aa14.43□□□□□ -0.1
PDE4DIP-226ENST00000528129 WIZO95785 1651 aa14.4□□□□□ -0.1
PDE4DIP-226ENST00000528129 CHD1O14646 1710 aa14.38□□□□□ -0.11
PDE4DIP-226ENST00000528129 FBLN2P98095 1184 aa14.36□□□□□ -0.11
PDE4DIP-226ENST00000528129 EIF4G3O43432 1585 aaKnown RBP14.35□□□□□ -0.11
PDE4DIP-226ENST00000528129 AQRO60306 1485 aaKnown RBP eCLIP14.33□□□□□ -0.12
PDE4DIP-226ENST00000528129 TOPBP1Q92547 1522 aa14.28□□□□□ -0.12
PDE4DIP-226ENST00000528129 CLASP1Q7Z460 1538 aa14.23□□□□□ -0.13
PDE4DIP-226ENST00000528129 TARBP1Q13395 1621 aaKnown RBP14.2□□□□□ -0.14
PDE4DIP-226ENST00000528129 TOP2AP11388 1531 aaKnown RBP14.2□□□□□ -0.14
PDE4DIP-226ENST00000528129 PRDM2Q13029 1718 aa14.16□□□□□ -0.14
PDE4DIP-226ENST00000528129 GAPVD1Q14C86 1478 aa14.15□□□□□ -0.14
PDE4DIP-226ENST00000528129 KDM4FA0A1W2PPD8 638 aa14.15□□□□□ -0.14
PDE4DIP-226ENST00000528129 TDRD9Q8NDG6 1382 aaKnown RBP14.13□□□□□ -0.15
PDE4DIP-226ENST00000528129 ABCC8Q09428 1581 aa14.13□□□□□ -0.15
PDE4DIP-226ENST00000528129 DNMBPQ6XZF7 1577 aa14.12□□□□□ -0.15
PDE4DIP-226ENST00000528129 CHMP7Q8WUX9 453 aaPredicted RBP14.11□□□□□ -0.15
PDE4DIP-226ENST00000528129 SNAPC4Q5SXM2 1469 aa14.11□□□□□ -0.15
PDE4DIP-226ENST00000528129 CCDC88BA6NC98 1476 aa14.1□□□□□ -0.15
PDE4DIP-226ENST00000528129 RAD54L2Q9Y4B4 1467 aa14.1□□□□□ -0.15
PDE4DIP-226ENST00000528129 SYNJ1O43426 1573 aa14.09□□□□□ -0.15
PDE4DIP-226ENST00000528129 POLA1P09884 1462 aaPredicted RBP14.09□□□□□ -0.15
PDE4DIP-226ENST00000528129 KIF13AQ9H1H9 1805 aa14.02□□□□□ -0.16
PDE4DIP-226ENST00000528129 ERCC6L2Q5T890 1561 aa14.02□□□□□ -0.16
PDE4DIP-226ENST00000528129 SOGA1O94964 1423 aa14.01□□□□□ -0.17
PDE4DIP-226ENST00000528129 MAGI1Q96QZ7 1491 aaPredicted RBP13.99□□□□□ -0.17
PDE4DIP-226ENST00000528129 SYNJ2O15056 1496 aa13.99□□□□□ -0.17
PDE4DIP-226ENST00000528129 GRIN2BQ13224 1484 aa13.94□□□□□ -0.18
PDE4DIP-226ENST00000528129 WDR97A6NE52 1622 aa13.9□□□□□ -0.18
PDE4DIP-226ENST00000528129 FAM69CQ0P6D2 419 aa13.9□□□□□ -0.18
PDE4DIP-226ENST00000528129 FGD5Q6ZNL6 1462 aa13.89□□□□□ -0.19
PDE4DIP-226ENST00000528129 CEP170Q5SW79 1584 aa13.86□□□□□ -0.19
PDE4DIP-226ENST00000528129 CHIC1Q5VXU3 224 aa13.85□□□□□ -0.19
PDE4DIP-226ENST00000528129 ABCC10Q5T3U5 1492 aa13.85□□□□□ -0.19
PDE4DIP-226ENST00000528129 KDM6BO15054 1643 aa13.82□□□□□ -0.2
PDE4DIP-226ENST00000528129 HECW2Q9P2P5 1572 aa13.81□□□□□ -0.2
PDE4DIP-226ENST00000528129 PBRM1Q86U86 1689 aa13.8□□□□□ -0.2
PDE4DIP-226ENST00000528129 FBXO41Q8TF61 875 aa13.8□□□□□ -0.2
PDE4DIP-226ENST00000528129 CUX1P39880 1505 aa13.78□□□□□ -0.2
PDE4DIP-226ENST00000528129 DIP2BQ9P265 1576 aa13.78□□□□□ -0.2
PDE4DIP-226ENST00000528129 ADGRL1O94910 1474 aa13.77□□□□□ -0.21
PDE4DIP-226ENST00000528129 NUP160Q12769 1436 aa13.77□□□□□ -0.21
PDE4DIP-226ENST00000528129 GRIN2AQ12879 1464 aa13.77□□□□□ -0.21
PDE4DIP-226ENST00000528129 SHROOM2Q13796 1616 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms