RNA–Protein interactions for RNA: ENST00000528113.5

NEIL2-206, Transcript of nei like DNA glycosylase 2, humanhuman

TSL 4

Gene NEIL2, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL2-206ENST00000528113 NISCHQ9Y2I1 1504 aa49.77■■■■■ 5.56
NEIL2-206ENST00000528113 ABCC9O60706 1549 aa44.75■■■■■ 4.75
NEIL2-206ENST00000528113 CCDC180Q9P1Z9 1646 aa44.59■■■■■ 4.73
NEIL2-206ENST00000528113 RB1CC1Q8TDY2 1594 aa42.48■■■■■ 4.39
NEIL2-206ENST00000528113 NACADO15069 1562 aa42.2■■■■■ 4.35
NEIL2-206ENST00000528113 DNAJC5BQ9UF47 199 aa42.19■■■■■ 4.34
NEIL2-206ENST00000528113 DCAF8L2P0C7V8 631 aa42.09■■■■■ 4.33
NEIL2-206ENST00000528113 PABPN1Q86U42 306 aaKnown RBP eCLIP41.72■■■■■ 4.27
NEIL2-206ENST00000528113 UNC13AQ9UPW8 1703 aa41.63■■■■■ 4.25
NEIL2-206ENST00000528113 MYO15BQ96JP2 1530 aa41.6■■■■■ 4.25
NEIL2-206ENST00000528113 BICRAQ9NZM4 1560 aa41.37■■■■■ 4.21
NEIL2-206ENST00000528113 ZCCHC6Q5VYS8 1495 aaKnown RBP41.21■■■■■ 4.19
NEIL2-206ENST00000528113 DCAF1Q9Y4B6 1507 aa41.06■■■■■ 4.16
NEIL2-206ENST00000528113 SCRIBQ14160 1630 aa40.68■■■■■ 4.1
NEIL2-206ENST00000528113 SHROOM4Q9ULL8 1493 aa40.62■■■■■ 4.09
NEIL2-206ENST00000528113 CC2D2AQ9P2K1 1620 aa40.41■■■■■ 4.06
NEIL2-206ENST00000528113 EIF4G1Q04637 1599 aaKnown RBP40.29■■■■■ 4.04
NEIL2-206ENST00000528113 CECR2Q9BXF3 1484 aa40.28■■■■■ 4.04
NEIL2-206ENST00000528113 NCAPD3P42695 1498 aa39.02■■■■□ 3.84
NEIL2-206ENST00000528113 ATAD2BQ9ULI0 1458 aa38.9■■■■□ 3.82
NEIL2-206ENST00000528113 SMARCA4P51532 1647 aa38.81■■■■□ 3.8
NEIL2-206ENST00000528113 SMARCA2P51531 1590 aa38.7■■■■□ 3.79
NEIL2-206ENST00000528113 DNAJC5Q9H3Z4 198 aa38.68■■■■□ 3.78
NEIL2-206ENST00000528113 HMGXB3Q12766 1538 aa38.65■■■■□ 3.78
NEIL2-206ENST00000528113 BAZ1AQ9NRL2 1556 aaPredicted RBP38.57■■■■□ 3.77
NEIL2-206ENST00000528113 ERCC6Q03468 1493 aa38.54■■■■□ 3.76
NEIL2-206ENST00000528113 CUX2O14529 1486 aa38.5■■■■□ 3.75
NEIL2-206ENST00000528113 NESP48681 1621 aa38.47■■■■□ 3.75
NEIL2-206ENST00000528113 BAZ1BQ9UIG0 1483 aaKnown RBP38.45■■■■□ 3.75
NEIL2-206ENST00000528113 PEG3Q9GZU2 1588 aa38.43■■■■□ 3.74
NEIL2-206ENST00000528113 MROH2BQ7Z745 1585 aa38.39■■■■□ 3.74
NEIL2-206ENST00000528113 LAMC3Q9Y6N6 1575 aa38.09■■■■□ 3.69
NEIL2-206ENST00000528113 THOC2Q8NI27 1593 aaKnown RBP38.01■■■■□ 3.67
NEIL2-206ENST00000528113 WIZO95785 1651 aa37.92■■■■□ 3.66
NEIL2-206ENST00000528113 KIF21AQ7Z4S6 1674 aa37.92■■■■□ 3.66
NEIL2-206ENST00000528113 PDS5BQ9NTI5 1447 aa37.87■■■■□ 3.65
NEIL2-206ENST00000528113 CADPSQ9ULU8 1353 aa37.83■■■■□ 3.65
NEIL2-206ENST00000528113 RSF1Q96T23 1441 aaPredicted RBP37.58■■■■□ 3.61
NEIL2-206ENST00000528113 MRC2Q9UBG0 1479 aa37.54■■■■□ 3.6
NEIL2-206ENST00000528113 WDR62O43379 1518 aa37.46■■■■□ 3.59
NEIL2-206ENST00000528113 CFTRP13569 1480 aa37.38■■■■□ 3.57
NEIL2-206ENST00000528113 CEP164Q9UPV0 1460 aa37.38■■■■□ 3.57
NEIL2-206ENST00000528113 FANCD2Q9BXW9 1451 aa37.37■■■■□ 3.57
NEIL2-206ENST00000528113 TOP2AP11388 1531 aaKnown RBP37.36■■■■□ 3.57
NEIL2-206ENST00000528113 URB2Q14146 1524 aaKnown RBP37.11■■■■□ 3.53
NEIL2-206ENST00000528113 CCDC88BA6NC98 1476 aa37.02■■■■□ 3.52
NEIL2-206ENST00000528113 PRDM2Q13029 1718 aa36.93■■■■□ 3.5
NEIL2-206ENST00000528113 TRIM41Q8WV44 630 aa36.92■■■■□ 3.5
NEIL2-206ENST00000528113 OSCARQ8IYS5 282 aa36.83■■■■□ 3.49
NEIL2-206ENST00000528113 TOPBP1Q92547 1522 aa36.68■■■■□ 3.46
NEIL2-206ENST00000528113 ZNF608Q9ULD9 1512 aaPredicted RBP36.68■■■■□ 3.46
NEIL2-206ENST00000528113 IFT140Q96RY7 1462 aa36.64■■■■□ 3.46
NEIL2-206ENST00000528113 ABCC8Q09428 1581 aa36.53■■■■□ 3.44
NEIL2-206ENST00000528113 DNMBPQ6XZF7 1577 aa36.49■■■■□ 3.43
NEIL2-206ENST00000528113 EIF4G3O43432 1585 aaKnown RBP36.39■■■■□ 3.42
NEIL2-206ENST00000528113 TARBP1Q13395 1621 aaKnown RBP36.37■■■■□ 3.41
NEIL2-206ENST00000528113 AQRO60306 1485 aaKnown RBP eCLIP36.35■■■■□ 3.41
NEIL2-206ENST00000528113 RIMBP3CA6NJZ7 1639 aa36.33■■■■□ 3.41
NEIL2-206ENST00000528113 RIMBP3BA6NNM3 1639 aa36.33■■■■□ 3.41
NEIL2-206ENST00000528113 RIMBP3Q9UFD9 1639 aa36.33■■■■□ 3.41
NEIL2-206ENST00000528113 POLA1P09884 1462 aaPredicted RBP36.3■■■■□ 3.4
NEIL2-206ENST00000528113 RAD54L2Q9Y4B4 1467 aa36.22■■■■□ 3.39
NEIL2-206ENST00000528113 ARHGEF11O15085 1522 aa36.19■■■■□ 3.38
NEIL2-206ENST00000528113 CHD1O14646 1710 aa36.16■■■■□ 3.38
NEIL2-206ENST00000528113 SOGA1O94964 1423 aa36.15■■■■□ 3.38
NEIL2-206ENST00000528113 TDRD9Q8NDG6 1382 aaKnown RBP36.12■■■■□ 3.37
NEIL2-206ENST00000528113 FBLN2P98095 1184 aa36.08■■■■□ 3.37
NEIL2-206ENST00000528113 FGD5Q6ZNL6 1462 aa36.05■■■■□ 3.36
NEIL2-206ENST00000528113 CUX1P39880 1505 aa36.04■■■■□ 3.36
NEIL2-206ENST00000528113 CYB5RLQ6IPT4 315 aa36■■■■□ 3.35
NEIL2-206ENST00000528113 SNAPC4Q5SXM2 1469 aa35.91■■■■□ 3.34
NEIL2-206ENST00000528113 SUPT5HO00267 1087 aaKnown RBP35.89■■■■□ 3.34
NEIL2-206ENST00000528113 WDR97A6NE52 1622 aa35.88■■■■□ 3.33
NEIL2-206ENST00000528113 ARAP1Q96P48 1450 aa35.86■■■■□ 3.33
NEIL2-206ENST00000528113 CHMP7Q8WUX9 453 aaPredicted RBP35.8■■■■□ 3.32
NEIL2-206ENST00000528113 GRIN2BQ13224 1484 aa35.79■■■■□ 3.32
NEIL2-206ENST00000528113 MAGI1Q96QZ7 1491 aaPredicted RBP35.77■■■■□ 3.32
NEIL2-206ENST00000528113 CLASP1Q7Z460 1538 aa35.74■■■■□ 3.31
NEIL2-206ENST00000528113 GAPVD1Q14C86 1478 aa35.68■■■■□ 3.3
NEIL2-206ENST00000528113 SYNJ2O15056 1496 aa35.67■■■■□ 3.3
NEIL2-206ENST00000528113 SYNJ1O43426 1573 aa35.66■■■■□ 3.3
NEIL2-206ENST00000528113 ABCA10Q8WWZ4 1543 aa35.64■■■■□ 3.3
NEIL2-206ENST00000528113 PBRM1Q86U86 1689 aa35.64■■■■□ 3.3
NEIL2-206ENST00000528113 ABCA5Q8WWZ7 1642 aa35.57■■■■□ 3.29
NEIL2-206ENST00000528113 TRHP20396 242 aaPredicted RBP35.57■■■■□ 3.28
NEIL2-206ENST00000528113 WRNQ14191 1432 aaPredicted RBP eCLIP35.46■■■■□ 3.27
NEIL2-206ENST00000528113 BIVM-ERCC5R4GMW8 1640 aa35.42■■■■□ 3.26
NEIL2-206ENST00000528113 TOP2BQ02880 1626 aa35.41■■■■□ 3.26
NEIL2-206ENST00000528113 GRIN2AQ12879 1464 aa35.34■■■■□ 3.25
NEIL2-206ENST00000528113 ADAMTS12P58397 1594 aa35.29■■■■□ 3.24
NEIL2-206ENST00000528113 ERCC6L2Q5T890 1561 aa35.26■■■■□ 3.24
NEIL2-206ENST00000528113 CEP170Q5SW79 1584 aa35.25■■■■□ 3.23
NEIL2-206ENST00000528113 NUP160Q12769 1436 aa35.24■■■■□ 3.23
NEIL2-206ENST00000528113 FHAD1B1AJZ9 1412 aa35.22■■■■□ 3.23
NEIL2-206ENST00000528113 ERICH3Q5RHP9 1530 aa35.16■■■■□ 3.22
NEIL2-206ENST00000528113 SHROOM2Q13796 1616 aa35.08■■■■□ 3.21
NEIL2-206ENST00000528113 JPH4Q96JJ6 628 aa34.95■■■■□ 3.19
NEIL2-206ENST00000528113 PRG4Q92954 1404 aaPredicted RBP34.91■■■■□ 3.18
NEIL2-206ENST00000528113 IGF1RP08069 1367 aa34.81■■■■□ 3.16
NEIL2-206ENST00000528113 RUSC2Q8N2Y8 1516 aa34.79■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms