RNA–Protein interactions for RNA: ENST00000528106.2

RBM4B-204, Transcript of RNA binding motif protein 4B, humanhuman

TSL 5

Gene RBM4B, Length 324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM4B-204ENST00000528106 NISCHQ9Y2I1 1504 aa25.3■■□□□ 1.64
RBM4B-204ENST00000528106 CCDC180Q9P1Z9 1646 aa22.7■■□□□ 1.22
RBM4B-204ENST00000528106 ABCC9O60706 1549 aa22.43■■□□□ 1.18
RBM4B-204ENST00000528106 RB1CC1Q8TDY2 1594 aa21.46■■□□□ 1.03
RBM4B-204ENST00000528106 NACADO15069 1562 aa21.35■■□□□ 1.01
RBM4B-204ENST00000528106 DCAF8L2P0C7V8 631 aa21.27■■□□□ 1
RBM4B-204ENST00000528106 UNC13AQ9UPW8 1703 aa21.12■□□□□ 0.97
RBM4B-204ENST00000528106 MYO15BQ96JP2 1530 aa21.07■□□□□ 0.96
RBM4B-204ENST00000528106 ZCCHC6Q5VYS8 1495 aaKnown RBP21.02■□□□□ 0.96
RBM4B-204ENST00000528106 DCAF1Q9Y4B6 1507 aa20.89■□□□□ 0.94
RBM4B-204ENST00000528106 PABPN1Q86U42 306 aaKnown RBP eCLIP20.87■□□□□ 0.93
RBM4B-204ENST00000528106 BICRAQ9NZM4 1560 aa20.81■□□□□ 0.92
RBM4B-204ENST00000528106 DNAJC5BQ9UF47 199 aa20.77■□□□□ 0.92
RBM4B-204ENST00000528106 SCRIBQ14160 1630 aa20.7■□□□□ 0.9
RBM4B-204ENST00000528106 SHROOM4Q9ULL8 1493 aa20.51■□□□□ 0.87
RBM4B-204ENST00000528106 CC2D2AQ9P2K1 1620 aa20.31■□□□□ 0.84
RBM4B-204ENST00000528106 EIF4G1Q04637 1599 aaKnown RBP20.29■□□□□ 0.84
RBM4B-204ENST00000528106 CECR2Q9BXF3 1484 aa20.16■□□□□ 0.82
RBM4B-204ENST00000528106 SMARCA4P51532 1647 aa19.75■□□□□ 0.75
RBM4B-204ENST00000528106 BAZ1AQ9NRL2 1556 aaPredicted RBP19.65■□□□□ 0.74
RBM4B-204ENST00000528106 NCAPD3P42695 1498 aa19.64■□□□□ 0.73
RBM4B-204ENST00000528106 ATAD2BQ9ULI0 1458 aa19.64■□□□□ 0.73
RBM4B-204ENST00000528106 SMARCA2P51531 1590 aa19.64■□□□□ 0.73
RBM4B-204ENST00000528106 HMGXB3Q12766 1538 aa19.58■□□□□ 0.73
RBM4B-204ENST00000528106 MROH2BQ7Z745 1585 aa19.51■□□□□ 0.71
RBM4B-204ENST00000528106 PEG3Q9GZU2 1588 aa19.51■□□□□ 0.71
RBM4B-204ENST00000528106 BAZ1BQ9UIG0 1483 aaKnown RBP19.5■□□□□ 0.71
RBM4B-204ENST00000528106 WIZO95785 1651 aa19.36■□□□□ 0.69
RBM4B-204ENST00000528106 ERCC6Q03468 1493 aa19.35■□□□□ 0.69
RBM4B-204ENST00000528106 NESP48681 1621 aa19.33■□□□□ 0.69
RBM4B-204ENST00000528106 LAMC3Q9Y6N6 1575 aa19.24■□□□□ 0.67
RBM4B-204ENST00000528106 CUX2O14529 1486 aa19.22■□□□□ 0.67
RBM4B-204ENST00000528106 KIF21AQ7Z4S6 1674 aa19.2■□□□□ 0.66
RBM4B-204ENST00000528106 RSF1Q96T23 1441 aaPredicted RBP19.15■□□□□ 0.66
RBM4B-204ENST00000528106 THOC2Q8NI27 1593 aaKnown RBP19.13■□□□□ 0.65
RBM4B-204ENST00000528106 TOP2AP11388 1531 aaKnown RBP19.08■□□□□ 0.64
RBM4B-204ENST00000528106 PDS5BQ9NTI5 1447 aa19.07■□□□□ 0.64
RBM4B-204ENST00000528106 CADPSQ9ULU8 1353 aa19.06■□□□□ 0.64
RBM4B-204ENST00000528106 PRDM2Q13029 1718 aa18.95■□□□□ 0.62
RBM4B-204ENST00000528106 MRC2Q9UBG0 1479 aa18.92■□□□□ 0.62
RBM4B-204ENST00000528106 CFTRP13569 1480 aa18.9■□□□□ 0.62
RBM4B-204ENST00000528106 CEP164Q9UPV0 1460 aa18.9■□□□□ 0.62
RBM4B-204ENST00000528106 DNAJC5Q9H3Z4 198 aa18.9■□□□□ 0.62
RBM4B-204ENST00000528106 FANCD2Q9BXW9 1451 aa18.89■□□□□ 0.61
RBM4B-204ENST00000528106 WDR62O43379 1518 aa18.88■□□□□ 0.61
RBM4B-204ENST00000528106 CCDC88BA6NC98 1476 aa18.83■□□□□ 0.6
RBM4B-204ENST00000528106 URB2Q14146 1524 aaKnown RBP18.72■□□□□ 0.59
RBM4B-204ENST00000528106 TOPBP1Q92547 1522 aa18.57■□□□□ 0.56
RBM4B-204ENST00000528106 DNMBPQ6XZF7 1577 aa18.54■□□□□ 0.56
RBM4B-204ENST00000528106 ABCC8Q09428 1581 aa18.52■□□□□ 0.56
RBM4B-204ENST00000528106 SUPT5HO00267 1087 aaKnown RBP18.5■□□□□ 0.55
RBM4B-204ENST00000528106 IFT140Q96RY7 1462 aa18.49■□□□□ 0.55
RBM4B-204ENST00000528106 ZNF608Q9ULD9 1512 aaPredicted RBP18.45■□□□□ 0.54
RBM4B-204ENST00000528106 EIF4G3O43432 1585 aaKnown RBP18.42■□□□□ 0.54
RBM4B-204ENST00000528106 TARBP1Q13395 1621 aaKnown RBP18.41■□□□□ 0.54
RBM4B-204ENST00000528106 POLA1P09884 1462 aaPredicted RBP18.38■□□□□ 0.53
RBM4B-204ENST00000528106 OSCARQ8IYS5 282 aa18.34■□□□□ 0.53
RBM4B-204ENST00000528106 CUX1P39880 1505 aa18.33■□□□□ 0.52
RBM4B-204ENST00000528106 CHD1O14646 1710 aa18.32■□□□□ 0.52
RBM4B-204ENST00000528106 FGD5Q6ZNL6 1462 aa18.32■□□□□ 0.52
RBM4B-204ENST00000528106 RAD54L2Q9Y4B4 1467 aa18.32■□□□□ 0.52
RBM4B-204ENST00000528106 AQRO60306 1485 aaKnown RBP eCLIP18.3■□□□□ 0.52
RBM4B-204ENST00000528106 SOGA1O94964 1423 aa18.28■□□□□ 0.52
RBM4B-204ENST00000528106 WDR97A6NE52 1622 aa18.25■□□□□ 0.51
RBM4B-204ENST00000528106 TRIM41Q8WV44 630 aa18.23■□□□□ 0.51
RBM4B-204ENST00000528106 TDRD9Q8NDG6 1382 aaKnown RBP18.21■□□□□ 0.51
RBM4B-204ENST00000528106 PBRM1Q86U86 1689 aa18.19■□□□□ 0.5
RBM4B-204ENST00000528106 RIMBP3CA6NJZ7 1639 aa18.19■□□□□ 0.5
RBM4B-204ENST00000528106 RIMBP3BA6NNM3 1639 aa18.19■□□□□ 0.5
RBM4B-204ENST00000528106 RIMBP3Q9UFD9 1639 aa18.19■□□□□ 0.5
RBM4B-204ENST00000528106 FBLN2P98095 1184 aa18.15■□□□□ 0.5
RBM4B-204ENST00000528106 BIVM-ERCC5R4GMW8 1640 aa18.15■□□□□ 0.5
RBM4B-204ENST00000528106 SNAPC4Q5SXM2 1469 aa18.14■□□□□ 0.5
RBM4B-204ENST00000528106 TOP2BQ02880 1626 aa18.12■□□□□ 0.49
RBM4B-204ENST00000528106 GRIN2BQ13224 1484 aa18.11■□□□□ 0.49
RBM4B-204ENST00000528106 SYNJ1O43426 1573 aa18.11■□□□□ 0.49
RBM4B-204ENST00000528106 ABCA5Q8WWZ7 1642 aa18.1■□□□□ 0.49
RBM4B-204ENST00000528106 ARHGEF11O15085 1522 aa18.1■□□□□ 0.49
RBM4B-204ENST00000528106 ABCA10Q8WWZ4 1543 aa18.09■□□□□ 0.49
RBM4B-204ENST00000528106 MAGI1Q96QZ7 1491 aaPredicted RBP18.09■□□□□ 0.49
RBM4B-204ENST00000528106 GAPVD1Q14C86 1478 aa18.08■□□□□ 0.49
RBM4B-204ENST00000528106 WRNQ14191 1432 aaPredicted RBP eCLIP18.08■□□□□ 0.49
RBM4B-204ENST00000528106 CHMP7Q8WUX9 453 aaPredicted RBP18.03■□□□□ 0.48
RBM4B-204ENST00000528106 SYNJ2O15056 1496 aa18.02■□□□□ 0.48
RBM4B-204ENST00000528106 CLASP1Q7Z460 1538 aa18■□□□□ 0.47
RBM4B-204ENST00000528106 ADAMTS12P58397 1594 aa17.95■□□□□ 0.46
RBM4B-204ENST00000528106 ARAP1Q96P48 1450 aa17.93■□□□□ 0.46
RBM4B-204ENST00000528106 CYB5RLQ6IPT4 315 aa17.92■□□□□ 0.46
RBM4B-204ENST00000528106 GRIN2AQ12879 1464 aa17.88■□□□□ 0.45
RBM4B-204ENST00000528106 ERICH3Q5RHP9 1530 aa17.88■□□□□ 0.45
RBM4B-204ENST00000528106 CEP170Q5SW79 1584 aa17.84■□□□□ 0.45
RBM4B-204ENST00000528106 FHAD1B1AJZ9 1412 aa17.84■□□□□ 0.45
RBM4B-204ENST00000528106 NUP160Q12769 1436 aa17.79■□□□□ 0.44
RBM4B-204ENST00000528106 SHROOM2Q13796 1616 aa17.76■□□□□ 0.43
RBM4B-204ENST00000528106 ERCC6L2Q5T890 1561 aa17.75■□□□□ 0.43
RBM4B-204ENST00000528106 CUL7Q14999 1698 aa17.73■□□□□ 0.43
RBM4B-204ENST00000528106 KIF27Q86VH2 1401 aa17.72■□□□□ 0.43
RBM4B-204ENST00000528106 RUSC2Q8N2Y8 1516 aa17.69■□□□□ 0.42
RBM4B-204ENST00000528106 TRHP20396 242 aaPredicted RBP17.67■□□□□ 0.42
RBM4B-204ENST00000528106 IGF1RP08069 1367 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms