RNA–Protein interactions for RNA: ENST00000528090.5

LINC00964-204, long intergenic non-protein coding RNA 964, humanhuman

TSL 4 BASIC

Gene LINC00964, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00964-204ENST00000528090 AEBP2Q6ZN18 517 aaPredicted RBP19.83■□□□□ 0.77
LINC00964-204ENST00000528090 CHIC1Q5VXU3 224 aa18.74■□□□□ 0.59
LINC00964-204ENST00000528090 NISCHQ9Y2I1 1504 aa17.93■□□□□ 0.46
LINC00964-204ENST00000528090 SENP3Q9H4L4 574 aaPredicted RBP16.77■□□□□ 0.28
LINC00964-204ENST00000528090 ABCC9O60706 1549 aa16.64■□□□□ 0.25
LINC00964-204ENST00000528090 PHF23Q9BUL5 403 aaPredicted RBP16.59■□□□□ 0.25
LINC00964-204ENST00000528090 CCDC180Q9P1Z9 1646 aa16.19■□□□□ 0.18
LINC00964-204ENST00000528090 DNAJC5BQ9UF47 199 aa15.98■□□□□ 0.15
LINC00964-204ENST00000528090 FOXD1Q16676 465 aa15.73■□□□□ 0.11
LINC00964-204ENST00000528090 RB1CC1Q8TDY2 1594 aa15.7■□□□□ 0.1
LINC00964-204ENST00000528090 NACADO15069 1562 aa15.53■□□□□ 0.08
LINC00964-204ENST00000528090 PABPN1Q86U42 306 aaKnown RBP eCLIP15.5■□□□□ 0.07
LINC00964-204ENST00000528090 DCAF8L2P0C7V8 631 aa15.49■□□□□ 0.07
LINC00964-204ENST00000528090 MYO15BQ96JP2 1530 aa15.22■□□□□ 0.03
LINC00964-204ENST00000528090 DNAJC5Q9H3Z4 198 aa15.14■□□□□ 0.01
LINC00964-204ENST00000528090 BICRAQ9NZM4 1560 aa15.11■□□□□ 0.01
LINC00964-204ENST00000528090 SHROOM4Q9ULL8 1493 aa15.1■□□□□ 0.01
LINC00964-204ENST00000528090 CECR2Q9BXF3 1484 aa15.09■□□□□ 0.01
LINC00964-204ENST00000528090 UNC13AQ9UPW8 1703 aa15.06■□□□□ 0
LINC00964-204ENST00000528090 CC2D2AQ9P2K1 1620 aa14.96□□□□□ -0.01
LINC00964-204ENST00000528090 PLPPR3Q6T4P5 718 aa14.9□□□□□ -0.02
LINC00964-204ENST00000528090 EIF4G1Q04637 1599 aaKnown RBP14.85□□□□□ -0.03
LINC00964-204ENST00000528090 DCAF1Q9Y4B6 1507 aa14.83□□□□□ -0.04
LINC00964-204ENST00000528090 PPP6R1Q9UPN7 881 aa14.74□□□□□ -0.05
LINC00964-204ENST00000528090 ZCCHC6Q5VYS8 1495 aaKnown RBP14.74□□□□□ -0.05
LINC00964-204ENST00000528090 SCRIBQ14160 1630 aa14.71□□□□□ -0.05
LINC00964-204ENST00000528090 ADRA2BP18089 450 aa14.65□□□□□ -0.06
LINC00964-204ENST00000528090 PIAS4Q8N2W9 510 aaPredicted RBP14.64□□□□□ -0.07
LINC00964-204ENST00000528090 CUX2O14529 1486 aa14.61□□□□□ -0.07
LINC00964-204ENST00000528090 MSH5O43196 834 aa14.6□□□□□ -0.07
LINC00964-204ENST00000528090 ERCC6Q03468 1493 aa14.5□□□□□ -0.09
LINC00964-204ENST00000528090 NCAPD3P42695 1498 aa14.38□□□□□ -0.11
LINC00964-204ENST00000528090 POTEDQ86YR6 584 aa14.37□□□□□ -0.11
LINC00964-204ENST00000528090 TRIM41Q8WV44 630 aa14.25□□□□□ -0.13
LINC00964-204ENST00000528090 ATAD2BQ9ULI0 1458 aa14.22□□□□□ -0.13
LINC00964-204ENST00000528090 SMARCA2P51531 1590 aa14.17□□□□□ -0.14
LINC00964-204ENST00000528090 HMGXB3Q12766 1538 aa14.15□□□□□ -0.14
LINC00964-204ENST00000528090 PDS5BQ9NTI5 1447 aa14.12□□□□□ -0.15
LINC00964-204ENST00000528090 NESP48681 1621 aa14.12□□□□□ -0.15
LINC00964-204ENST00000528090 BAZ1BQ9UIG0 1483 aaKnown RBP14.06□□□□□ -0.16
LINC00964-204ENST00000528090 LAMC3Q9Y6N6 1575 aa14.05□□□□□ -0.16
LINC00964-204ENST00000528090 OSCARQ8IYS5 282 aa14.01□□□□□ -0.17
LINC00964-204ENST00000528090 THOC2Q8NI27 1593 aaKnown RBP14□□□□□ -0.17
LINC00964-204ENST00000528090 SMARCA4P51532 1647 aa14□□□□□ -0.17
LINC00964-204ENST00000528090 BAZ1AQ9NRL2 1556 aaPredicted RBP13.97□□□□□ -0.17
LINC00964-204ENST00000528090 CADPSQ9ULU8 1353 aa13.96□□□□□ -0.18
LINC00964-204ENST00000528090 PEG3Q9GZU2 1588 aa13.92□□□□□ -0.18
LINC00964-204ENST00000528090 MRC2Q9UBG0 1479 aa13.9□□□□□ -0.18
LINC00964-204ENST00000528090 WDR62O43379 1518 aa13.82□□□□□ -0.2
LINC00964-204ENST00000528090 KIF21AQ7Z4S6 1674 aa13.82□□□□□ -0.2
LINC00964-204ENST00000528090 CEP164Q9UPV0 1460 aa13.77□□□□□ -0.21
LINC00964-204ENST00000528090 MROH2BQ7Z745 1585 aa13.75□□□□□ -0.21
LINC00964-204ENST00000528090 FANCD2Q9BXW9 1451 aa13.71□□□□□ -0.21
LINC00964-204ENST00000528090 TRHP20396 242 aaPredicted RBP13.66□□□□□ -0.22
LINC00964-204ENST00000528090 CFTRP13569 1480 aa13.64□□□□□ -0.23
LINC00964-204ENST00000528090 CYB5RLQ6IPT4 315 aa13.64□□□□□ -0.23
LINC00964-204ENST00000528090 RIMBP3CA6NJZ7 1639 aa13.57□□□□□ -0.24
LINC00964-204ENST00000528090 RIMBP3BA6NNM3 1639 aa13.57□□□□□ -0.24
LINC00964-204ENST00000528090 RIMBP3Q9UFD9 1639 aa13.57□□□□□ -0.24
LINC00964-204ENST00000528090 ARHGEF11O15085 1522 aa13.56□□□□□ -0.24
LINC00964-204ENST00000528090 IFT140Q96RY7 1462 aa13.55□□□□□ -0.24
LINC00964-204ENST00000528090 URB2Q14146 1524 aaKnown RBP13.54□□□□□ -0.24
LINC00964-204ENST00000528090 WIZO95785 1651 aa13.5□□□□□ -0.25
LINC00964-204ENST00000528090 ABCC8Q09428 1581 aa13.48□□□□□ -0.25
LINC00964-204ENST00000528090 FBLN2P98095 1184 aa13.47□□□□□ -0.25
LINC00964-204ENST00000528090 MAPK8IP2Q13387 824 aaPredicted RBP13.47□□□□□ -0.25
LINC00964-204ENST00000528090 RSF1Q96T23 1441 aaPredicted RBP13.46□□□□□ -0.26
LINC00964-204ENST00000528090 ZNF608Q9ULD9 1512 aaPredicted RBP13.44□□□□□ -0.26
LINC00964-204ENST00000528090 TOP2AP11388 1531 aaKnown RBP13.39□□□□□ -0.27
LINC00964-204ENST00000528090 ARAP1Q96P48 1450 aa13.38□□□□□ -0.27
LINC00964-204ENST00000528090 TOPBP1Q92547 1522 aa13.37□□□□□ -0.27
LINC00964-204ENST00000528090 DMRT2Q9Y5R5 561 aa13.35□□□□□ -0.27
LINC00964-204ENST00000528090 CHMP7Q8WUX9 453 aaPredicted RBP13.34□□□□□ -0.27
LINC00964-204ENST00000528090 AQRO60306 1485 aaKnown RBP eCLIP13.34□□□□□ -0.27
LINC00964-204ENST00000528090 EIF4G3O43432 1585 aaKnown RBP13.29□□□□□ -0.28
LINC00964-204ENST00000528090 CCDC88BA6NC98 1476 aa13.28□□□□□ -0.28
LINC00964-204ENST00000528090 DNMBPQ6XZF7 1577 aa13.27□□□□□ -0.29
LINC00964-204ENST00000528090 SOGA1O94964 1423 aa13.24□□□□□ -0.29
LINC00964-204ENST00000528090 PRDM2Q13029 1718 aa13.24□□□□□ -0.29
LINC00964-204ENST00000528090 TDRD9Q8NDG6 1382 aaKnown RBP13.23□□□□□ -0.29
LINC00964-204ENST00000528090 SCAF1Q9H7N4 1312 aaKnown RBP13.22□□□□□ -0.29
LINC00964-204ENST00000528090 CHD1O14646 1710 aa13.21□□□□□ -0.3
LINC00964-204ENST00000528090 POLA1P09884 1462 aaPredicted RBP13.21□□□□□ -0.3
LINC00964-204ENST00000528090 SYNJ1O43426 1573 aa13.2□□□□□ -0.3
LINC00964-204ENST00000528090 TARBP1Q13395 1621 aaKnown RBP13.2□□□□□ -0.3
LINC00964-204ENST00000528090 MAGI1Q96QZ7 1491 aaPredicted RBP13.19□□□□□ -0.3
LINC00964-204ENST00000528090 WDR97A6NE52 1622 aa13.17□□□□□ -0.3
LINC00964-204ENST00000528090 SNAPC4Q5SXM2 1469 aa13.16□□□□□ -0.3
LINC00964-204ENST00000528090 CLASP1Q7Z460 1538 aa13.15□□□□□ -0.3
LINC00964-204ENST00000528090 GRIN2BQ13224 1484 aa13.15□□□□□ -0.3
LINC00964-204ENST00000528090 GAPVD1Q14C86 1478 aa13.15□□□□□ -0.3
LINC00964-204ENST00000528090 RAD54L2Q9Y4B4 1467 aa13.15□□□□□ -0.3
LINC00964-204ENST00000528090 SYNJ2O15056 1496 aa13.14□□□□□ -0.31
LINC00964-204ENST00000528090 PPP4R3CPQ6ZMV5 832 aa13.1□□□□□ -0.31
LINC00964-204ENST00000528090 FGD5Q6ZNL6 1462 aa13.06□□□□□ -0.32
LINC00964-204ENST00000528090 NPM1P06748 294 aaKnown RBP eCLIP13.04□□□□□ -0.32
LINC00964-204ENST00000528090 FAM69CQ0P6D2 419 aa12.98□□□□□ -0.33
LINC00964-204ENST00000528090 ILDR1Q86SU0 546 aaPredicted RBP12.94□□□□□ -0.34
LINC00964-204ENST00000528090 CUX1P39880 1505 aa12.93□□□□□ -0.34
LINC00964-204ENST00000528090 ABCA10Q8WWZ4 1543 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms