RNA–Protein interactions for RNA: ENST00000528051.1

SPTBN2-203, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

TSL 2

Gene SPTBN2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-203ENST00000528051 NISCHQ9Y2I1 1504 aa34.89■■■■□ 3.18
SPTBN2-203ENST00000528051 CCDC180Q9P1Z9 1646 aa31.04■■■□□ 2.56
SPTBN2-203ENST00000528051 ABCC9O60706 1549 aa30.66■■■□□ 2.5
SPTBN2-203ENST00000528051 RB1CC1Q8TDY2 1594 aa29.34■■■□□ 2.29
SPTBN2-203ENST00000528051 NACADO15069 1562 aa29.27■■■□□ 2.28
SPTBN2-203ENST00000528051 DCAF8L2P0C7V8 631 aa29.15■■■□□ 2.26
SPTBN2-203ENST00000528051 MYO15BQ96JP2 1530 aa29.05■■■□□ 2.24
SPTBN2-203ENST00000528051 ZCCHC6Q5VYS8 1495 aaKnown RBP29.05■■■□□ 2.24
SPTBN2-203ENST00000528051 DCAF1Q9Y4B6 1507 aa28.85■■■□□ 2.21
SPTBN2-203ENST00000528051 PABPN1Q86U42 306 aaKnown RBP eCLIP28.62■■■□□ 2.17
SPTBN2-203ENST00000528051 UNC13AQ9UPW8 1703 aa28.6■■■□□ 2.17
SPTBN2-203ENST00000528051 BICRAQ9NZM4 1560 aa28.53■■■□□ 2.16
SPTBN2-203ENST00000528051 DNAJC5BQ9UF47 199 aa28.39■■■□□ 2.14
SPTBN2-203ENST00000528051 SCRIBQ14160 1630 aa28.36■■■□□ 2.13
SPTBN2-203ENST00000528051 SHROOM4Q9ULL8 1493 aa28.19■■■□□ 2.1
SPTBN2-203ENST00000528051 EIF4G1Q04637 1599 aaKnown RBP27.77■■■□□ 2.04
SPTBN2-203ENST00000528051 CC2D2AQ9P2K1 1620 aa27.69■■■□□ 2.02
SPTBN2-203ENST00000528051 CECR2Q9BXF3 1484 aa27.57■■■□□ 2
SPTBN2-203ENST00000528051 SMARCA4P51532 1647 aa27.09■■□□□ 1.93
SPTBN2-203ENST00000528051 NCAPD3P42695 1498 aa27.06■■□□□ 1.92
SPTBN2-203ENST00000528051 ATAD2BQ9ULI0 1458 aa27.05■■□□□ 1.92
SPTBN2-203ENST00000528051 BAZ1AQ9NRL2 1556 aaPredicted RBP27.02■■□□□ 1.92
SPTBN2-203ENST00000528051 SMARCA2P51531 1590 aa26.95■■□□□ 1.9
SPTBN2-203ENST00000528051 MROH2BQ7Z745 1585 aa26.91■■□□□ 1.9
SPTBN2-203ENST00000528051 HMGXB3Q12766 1538 aa26.89■■□□□ 1.89
SPTBN2-203ENST00000528051 PEG3Q9GZU2 1588 aa26.85■■□□□ 1.89
SPTBN2-203ENST00000528051 BAZ1BQ9UIG0 1483 aaKnown RBP26.77■■□□□ 1.88
SPTBN2-203ENST00000528051 WIZO95785 1651 aa26.54■■□□□ 1.84
SPTBN2-203ENST00000528051 RSF1Q96T23 1441 aaPredicted RBP26.53■■□□□ 1.84
SPTBN2-203ENST00000528051 NESP48681 1621 aa26.48■■□□□ 1.83
SPTBN2-203ENST00000528051 ERCC6Q03468 1493 aa26.4■■□□□ 1.82
SPTBN2-203ENST00000528051 LAMC3Q9Y6N6 1575 aa26.32■■□□□ 1.8
SPTBN2-203ENST00000528051 TOP2AP11388 1531 aaKnown RBP26.29■■□□□ 1.8
SPTBN2-203ENST00000528051 CADPSQ9ULU8 1353 aa26.25■■□□□ 1.79
SPTBN2-203ENST00000528051 CUX2O14529 1486 aa26.23■■□□□ 1.79
SPTBN2-203ENST00000528051 PDS5BQ9NTI5 1447 aa26.16■■□□□ 1.78
SPTBN2-203ENST00000528051 THOC2Q8NI27 1593 aaKnown RBP26.11■■□□□ 1.77
SPTBN2-203ENST00000528051 KIF21AQ7Z4S6 1674 aa26.07■■□□□ 1.76
SPTBN2-203ENST00000528051 CFTRP13569 1480 aa26.06■■□□□ 1.76
SPTBN2-203ENST00000528051 CCDC88BA6NC98 1476 aa25.98■■□□□ 1.75
SPTBN2-203ENST00000528051 FANCD2Q9BXW9 1451 aa25.94■■□□□ 1.74
SPTBN2-203ENST00000528051 MRC2Q9UBG0 1479 aa25.94■■□□□ 1.74
SPTBN2-203ENST00000528051 CEP164Q9UPV0 1460 aa25.91■■□□□ 1.74
SPTBN2-203ENST00000528051 WDR62O43379 1518 aa25.87■■□□□ 1.73
SPTBN2-203ENST00000528051 URB2Q14146 1524 aaKnown RBP25.73■■□□□ 1.71
SPTBN2-203ENST00000528051 PRDM2Q13029 1718 aa25.68■■□□□ 1.7
SPTBN2-203ENST00000528051 DNAJC5Q9H3Z4 198 aa25.67■■□□□ 1.7
SPTBN2-203ENST00000528051 SUPT5HO00267 1087 aaKnown RBP25.62■■□□□ 1.69
SPTBN2-203ENST00000528051 TOPBP1Q92547 1522 aa25.51■■□□□ 1.67
SPTBN2-203ENST00000528051 DNMBPQ6XZF7 1577 aa25.44■■□□□ 1.66
SPTBN2-203ENST00000528051 ABCC8Q09428 1581 aa25.43■■□□□ 1.66
SPTBN2-203ENST00000528051 IFT140Q96RY7 1462 aa25.4■■□□□ 1.66
SPTBN2-203ENST00000528051 ZNF608Q9ULD9 1512 aaPredicted RBP25.33■■□□□ 1.65
SPTBN2-203ENST00000528051 POLA1P09884 1462 aaPredicted RBP25.29■■□□□ 1.64
SPTBN2-203ENST00000528051 CUX1P39880 1505 aa25.26■■□□□ 1.63
SPTBN2-203ENST00000528051 TARBP1Q13395 1621 aaKnown RBP25.23■■□□□ 1.63
SPTBN2-203ENST00000528051 RAD54L2Q9Y4B4 1467 aa25.19■■□□□ 1.62
SPTBN2-203ENST00000528051 FGD5Q6ZNL6 1462 aa25.18■■□□□ 1.62
SPTBN2-203ENST00000528051 EIF4G3O43432 1585 aaKnown RBP25.18■■□□□ 1.62
SPTBN2-203ENST00000528051 SOGA1O94964 1423 aa25.14■■□□□ 1.62
SPTBN2-203ENST00000528051 AQRO60306 1485 aaKnown RBP eCLIP25.14■■□□□ 1.614e-6■□□□□ 10.8
SPTBN2-203ENST00000528051 TDRD9Q8NDG6 1382 aaKnown RBP25.05■■□□□ 1.6
SPTBN2-203ENST00000528051 OSCARQ8IYS5 282 aa25.05■■□□□ 1.6
SPTBN2-203ENST00000528051 WDR97A6NE52 1622 aa24.98■■□□□ 1.59
SPTBN2-203ENST00000528051 WRNQ14191 1432 aaPredicted RBP eCLIP24.98■■□□□ 1.59
SPTBN2-203ENST00000528051 SYNJ1O43426 1573 aa24.95■■□□□ 1.58
SPTBN2-203ENST00000528051 ABCA10Q8WWZ4 1543 aa24.94■■□□□ 1.58
SPTBN2-203ENST00000528051 TOP2BQ02880 1626 aa24.93■■□□□ 1.58
SPTBN2-203ENST00000528051 SNAPC4Q5SXM2 1469 aa24.91■■□□□ 1.58
SPTBN2-203ENST00000528051 BIVM-ERCC5R4GMW8 1640 aa24.91■■□□□ 1.58
SPTBN2-203ENST00000528051 GRIN2BQ13224 1484 aa24.89■■□□□ 1.58
SPTBN2-203ENST00000528051 GAPVD1Q14C86 1478 aa24.85■■□□□ 1.57
SPTBN2-203ENST00000528051 MAGI1Q96QZ7 1491 aaPredicted RBP24.84■■□□□ 1.57
SPTBN2-203ENST00000528051 ABCA5Q8WWZ7 1642 aa24.84■■□□□ 1.57
SPTBN2-203ENST00000528051 CHD1O14646 1710 aa24.83■■□□□ 1.57
SPTBN2-203ENST00000528051 FBLN2P98095 1184 aa24.81■■□□□ 1.56
SPTBN2-203ENST00000528051 SYNJ2O15056 1496 aa24.76■■□□□ 1.55
SPTBN2-203ENST00000528051 PBRM1Q86U86 1689 aa24.75■■□□□ 1.55
SPTBN2-203ENST00000528051 CHMP7Q8WUX9 453 aaPredicted RBP24.72■■□□□ 1.55
SPTBN2-203ENST00000528051 TRIM41Q8WV44 630 aa24.71■■□□□ 1.55
SPTBN2-203ENST00000528051 ARHGEF11O15085 1522 aa24.71■■□□□ 1.55
SPTBN2-203ENST00000528051 RIMBP3CA6NJZ7 1639 aa24.7■■□□□ 1.54
SPTBN2-203ENST00000528051 RIMBP3BA6NNM3 1639 aa24.7■■□□□ 1.54
SPTBN2-203ENST00000528051 RIMBP3Q9UFD9 1639 aa24.7■■□□□ 1.54
SPTBN2-203ENST00000528051 CLASP1Q7Z460 1538 aa24.66■■□□□ 1.54
SPTBN2-203ENST00000528051 ADAMTS12P58397 1594 aa24.63■■□□□ 1.53
SPTBN2-203ENST00000528051 ERICH3Q5RHP9 1530 aa24.6■■□□□ 1.53
SPTBN2-203ENST00000528051 GRIN2AQ12879 1464 aa24.58■■□□□ 1.52
SPTBN2-203ENST00000528051 FHAD1B1AJZ9 1412 aa24.57■■□□□ 1.52
SPTBN2-203ENST00000528051 ARAP1Q96P48 1450 aa24.52■■□□□ 1.52
SPTBN2-203ENST00000528051 NUP160Q12769 1436 aa24.51■■□□□ 1.51
SPTBN2-203ENST00000528051 CEP170Q5SW79 1584 aa24.47■■□□□ 1.51
SPTBN2-203ENST00000528051 KIF27Q86VH2 1401 aa24.46■■□□□ 1.51
SPTBN2-203ENST00000528051 CYB5RLQ6IPT4 315 aa24.45■■□□□ 1.5
SPTBN2-203ENST00000528051 IGF1RP08069 1367 aa24.43■■□□□ 1.5
SPTBN2-203ENST00000528051 ERCC6L2Q5T890 1561 aa24.32■■□□□ 1.48
SPTBN2-203ENST00000528051 SHROOM2Q13796 1616 aa24.3■■□□□ 1.48
SPTBN2-203ENST00000528051 CUL7Q14999 1698 aa24.29■■□□□ 1.48
SPTBN2-203ENST00000528051 RUSC2Q8N2Y8 1516 aa24.27■■□□□ 1.48
SPTBN2-203ENST00000528051 CARMIL1Q5VZK9 1371 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms