RNA–Protein interactions for RNA: ENST00000528028.1

ZNF250-205, Transcript of zinc finger protein 250, humanhuman

TSL 4

Gene ZNF250, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-205ENST00000528028 NISCHQ9Y2I1 1504 aa47.46■■■■■ 5.19
ZNF250-205ENST00000528028 ABCC9O60706 1549 aa42.56■■■■■ 4.4
ZNF250-205ENST00000528028 CCDC180Q9P1Z9 1646 aa42.48■■■■■ 4.39
ZNF250-205ENST00000528028 RB1CC1Q8TDY2 1594 aa40.44■■■■■ 4.06
ZNF250-205ENST00000528028 NACADO15069 1562 aa40.18■■■■■ 4.02
ZNF250-205ENST00000528028 DCAF8L2P0C7V8 631 aa40.15■■■■■ 4.02
ZNF250-205ENST00000528028 DNAJC5BQ9UF47 199 aa39.99■■■■□ 3.99
ZNF250-205ENST00000528028 PABPN1Q86U42 306 aaKnown RBP eCLIP39.7■■■■□ 3.95
ZNF250-205ENST00000528028 MYO15BQ96JP2 1530 aa39.61■■■■□ 3.93
ZNF250-205ENST00000528028 UNC13AQ9UPW8 1703 aa39.61■■■■□ 3.93
ZNF250-205ENST00000528028 BICRAQ9NZM4 1560 aa39.34■■■■□ 3.89
ZNF250-205ENST00000528028 ZCCHC6Q5VYS8 1495 aaKnown RBP39.32■■■■□ 3.89
ZNF250-205ENST00000528028 DCAF1Q9Y4B6 1507 aa39.15■■■■□ 3.86
ZNF250-205ENST00000528028 SCRIBQ14160 1630 aa38.81■■■■□ 3.8
ZNF250-205ENST00000528028 SHROOM4Q9ULL8 1493 aa38.65■■■■□ 3.78
ZNF250-205ENST00000528028 CC2D2AQ9P2K1 1620 aa38.41■■■■□ 3.74
ZNF250-205ENST00000528028 EIF4G1Q04637 1599 aaKnown RBP38.33■■■■□ 3.73
ZNF250-205ENST00000528028 CECR2Q9BXF3 1484 aa38.29■■■■□ 3.72
ZNF250-205ENST00000528028 NCAPD3P42695 1498 aa37.13■■■■□ 3.54
ZNF250-205ENST00000528028 ATAD2BQ9ULI0 1458 aa37.06■■■■□ 3.52
ZNF250-205ENST00000528028 SMARCA4P51532 1647 aa37■■■■□ 3.51
ZNF250-205ENST00000528028 SMARCA2P51531 1590 aa36.88■■■■□ 3.49
ZNF250-205ENST00000528028 HMGXB3Q12766 1538 aa36.8■■■■□ 3.48
ZNF250-205ENST00000528028 BAZ1AQ9NRL2 1556 aaPredicted RBP36.79■■■■□ 3.48
ZNF250-205ENST00000528028 ERCC6Q03468 1493 aa36.68■■■■□ 3.46
ZNF250-205ENST00000528028 BAZ1BQ9UIG0 1483 aaKnown RBP36.66■■■■□ 3.46
ZNF250-205ENST00000528028 MROH2BQ7Z745 1585 aa36.62■■■■□ 3.45
ZNF250-205ENST00000528028 PEG3Q9GZU2 1588 aa36.61■■■■□ 3.45
ZNF250-205ENST00000528028 NESP48681 1621 aa36.6■■■■□ 3.45
ZNF250-205ENST00000528028 DNAJC5Q9H3Z4 198 aa36.58■■■■□ 3.45
ZNF250-205ENST00000528028 CUX2O14529 1486 aa36.56■■■■□ 3.44
ZNF250-205ENST00000528028 LAMC3Q9Y6N6 1575 aa36.24■■■■□ 3.39
ZNF250-205ENST00000528028 WIZO95785 1651 aa36.19■■■■□ 3.38
ZNF250-205ENST00000528028 THOC2Q8NI27 1593 aaKnown RBP36.14■■■■□ 3.38
ZNF250-205ENST00000528028 KIF21AQ7Z4S6 1674 aa36.08■■■■□ 3.37
ZNF250-205ENST00000528028 PDS5BQ9NTI5 1447 aa36.05■■■■□ 3.36
ZNF250-205ENST00000528028 CADPSQ9ULU8 1353 aa36.02■■■■□ 3.36
ZNF250-205ENST00000528028 RSF1Q96T23 1441 aaPredicted RBP35.88■■■■□ 3.33
ZNF250-205ENST00000528028 MRC2Q9UBG0 1479 aa35.73■■■■□ 3.31
ZNF250-205ENST00000528028 TOP2AP11388 1531 aaKnown RBP35.66■■■■□ 3.3
ZNF250-205ENST00000528028 WDR62O43379 1518 aa35.65■■■■□ 3.3
ZNF250-205ENST00000528028 CFTRP13569 1480 aa35.61■■■■□ 3.29
ZNF250-205ENST00000528028 FANCD2Q9BXW9 1451 aa35.6■■■■□ 3.29
ZNF250-205ENST00000528028 CEP164Q9UPV0 1460 aa35.6■■■■□ 3.29
ZNF250-205ENST00000528028 CCDC88BA6NC98 1476 aa35.34■■■■□ 3.25
ZNF250-205ENST00000528028 URB2Q14146 1524 aaKnown RBP35.33■■■■□ 3.25
ZNF250-205ENST00000528028 PRDM2Q13029 1718 aa35.21■■■■□ 3.23
ZNF250-205ENST00000528028 TRIM41Q8WV44 630 aa35.02■■■■□ 3.2
ZNF250-205ENST00000528028 OSCARQ8IYS5 282 aa34.98■■■■□ 3.19
ZNF250-205ENST00000528028 TOPBP1Q92547 1522 aa34.95■■■■□ 3.19
ZNF250-205ENST00000528028 ZNF608Q9ULD9 1512 aaPredicted RBP34.91■■■■□ 3.18
ZNF250-205ENST00000528028 IFT140Q96RY7 1462 aa34.9■■■■□ 3.18
ZNF250-205ENST00000528028 ABCC8Q09428 1581 aa34.8■■■■□ 3.16
ZNF250-205ENST00000528028 DNMBPQ6XZF7 1577 aa34.79■■■■□ 3.16
ZNF250-205ENST00000528028 EIF4G3O43432 1585 aaKnown RBP34.65■■■■□ 3.14
ZNF250-205ENST00000528028 TARBP1Q13395 1621 aaKnown RBP34.63■■■■□ 3.13
ZNF250-205ENST00000528028 AQRO60306 1485 aaKnown RBP eCLIP34.62■■■■□ 3.13
ZNF250-205ENST00000528028 POLA1P09884 1462 aaPredicted RBP34.59■■■■□ 3.13
ZNF250-205ENST00000528028 RAD54L2Q9Y4B4 1467 aa34.52■■■■□ 3.12
ZNF250-205ENST00000528028 RIMBP3CA6NJZ7 1639 aa34.5■■■■□ 3.11
ZNF250-205ENST00000528028 RIMBP3BA6NNM3 1639 aa34.5■■■■□ 3.11
ZNF250-205ENST00000528028 RIMBP3Q9UFD9 1639 aa34.5■■■■□ 3.11
ZNF250-205ENST00000528028 SOGA1O94964 1423 aa34.46■■■■□ 3.11
ZNF250-205ENST00000528028 CHD1O14646 1710 aa34.41■■■■□ 3.1
ZNF250-205ENST00000528028 TDRD9Q8NDG6 1382 aaKnown RBP34.41■■■■□ 3.1
ZNF250-205ENST00000528028 SUPT5HO00267 1087 aaKnown RBP34.41■■■■□ 3.1
ZNF250-205ENST00000528028 ARHGEF11O15085 1522 aa34.39■■■■□ 3.1
ZNF250-205ENST00000528028 CUX1P39880 1505 aa34.39■■■■□ 3.1
ZNF250-205ENST00000528028 FGD5Q6ZNL6 1462 aa34.39■■■■□ 3.1
ZNF250-205ENST00000528028 FBLN2P98095 1184 aa34.37■■■■□ 3.09
ZNF250-205ENST00000528028 CYB5RLQ6IPT4 315 aa34.21■■■■□ 3.07
ZNF250-205ENST00000528028 SNAPC4Q5SXM2 1469 aa34.2■■■■□ 3.07
ZNF250-205ENST00000528028 WDR97A6NE52 1622 aa34.17■■■■□ 3.06
ZNF250-205ENST00000528028 GRIN2BQ13224 1484 aa34.1■■■■□ 3.05
ZNF250-205ENST00000528028 CHMP7Q8WUX9 453 aaPredicted RBP34.1■■■■□ 3.05
ZNF250-205ENST00000528028 MAGI1Q96QZ7 1491 aaPredicted RBP34.07■■■■□ 3.05
ZNF250-205ENST00000528028 ARAP1Q96P48 1450 aa34.07■■■■□ 3.04
ZNF250-205ENST00000528028 GAPVD1Q14C86 1478 aa34.01■■■■□ 3.04
ZNF250-205ENST00000528028 CLASP1Q7Z460 1538 aa34■■■■□ 3.03
ZNF250-205ENST00000528028 SYNJ2O15056 1496 aa33.98■■■■□ 3.03
ZNF250-205ENST00000528028 ABCA10Q8WWZ4 1543 aa33.98■■■■□ 3.03
ZNF250-205ENST00000528028 PBRM1Q86U86 1689 aa33.97■■■■□ 3.03
ZNF250-205ENST00000528028 SYNJ1O43426 1573 aa33.94■■■■□ 3.02
ZNF250-205ENST00000528028 ABCA5Q8WWZ7 1642 aa33.92■■■■□ 3.02
ZNF250-205ENST00000528028 WRNQ14191 1432 aaPredicted RBP eCLIP33.85■■■■□ 3.01
ZNF250-205ENST00000528028 TOP2BQ02880 1626 aa33.81■■■■□ 3
ZNF250-205ENST00000528028 BIVM-ERCC5R4GMW8 1640 aa33.81■■■■□ 3
ZNF250-205ENST00000528028 TRHP20396 242 aaPredicted RBP33.77■■■■□ 3
ZNF250-205ENST00000528028 GRIN2AQ12879 1464 aa33.68■■■□□ 2.98
ZNF250-205ENST00000528028 ADAMTS12P58397 1594 aa33.64■■■□□ 2.98
ZNF250-205ENST00000528028 CEP170Q5SW79 1584 aa33.57■■■□□ 2.96
ZNF250-205ENST00000528028 FHAD1B1AJZ9 1412 aa33.57■■■□□ 2.96
ZNF250-205ENST00000528028 NUP160Q12769 1436 aa33.56■■■□□ 2.96
ZNF250-205ENST00000528028 ERCC6L2Q5T890 1561 aa33.55■■■□□ 2.96
ZNF250-205ENST00000528028 ERICH3Q5RHP9 1530 aa33.53■■■□□ 2.96
ZNF250-205ENST00000528028 SHROOM2Q13796 1616 aa33.39■■■□□ 2.94
ZNF250-205ENST00000528028 JPH4Q96JJ6 628 aa33.29■■■□□ 2.92
ZNF250-205ENST00000528028 PRG4Q92954 1404 aaPredicted RBP33.27■■■□□ 2.92
ZNF250-205ENST00000528028 IGF1RP08069 1367 aa33.21■■■□□ 2.91
ZNF250-205ENST00000528028 RUSC2Q8N2Y8 1516 aa33.16■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 1513.2 ms