RNA–Protein interactions for RNA: ENST00000527977.5

CLMP-202, Transcript of CXADR like membrane protein, humanhuman

TSL 3

Gene CLMP, Length 712 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMP-202ENST00000527977 NISCHQ9Y2I1 1504 aa22.21■■□□□ 1.15
CLMP-202ENST00000527977 ABCC9O60706 1549 aa20.13■□□□□ 0.81
CLMP-202ENST00000527977 CCDC180Q9P1Z9 1646 aa19.94■□□□□ 0.78
CLMP-202ENST00000527977 RB1CC1Q8TDY2 1594 aa19.07■□□□□ 0.64
CLMP-202ENST00000527977 DNAJC5BQ9UF47 199 aa19.05■□□□□ 0.64
CLMP-202ENST00000527977 NACADO15069 1562 aa18.91■□□□□ 0.62
CLMP-202ENST00000527977 DCAF8L2P0C7V8 631 aa18.88■□□□□ 0.61
CLMP-202ENST00000527977 PABPN1Q86U42 306 aaKnown RBP eCLIP18.76■□□□□ 0.59
CLMP-202ENST00000527977 UNC13AQ9UPW8 1703 aa18.63■□□□□ 0.57
CLMP-202ENST00000527977 MYO15BQ96JP2 1530 aa18.59■□□□□ 0.57
CLMP-202ENST00000527977 BICRAQ9NZM4 1560 aa18.54■□□□□ 0.56
CLMP-202ENST00000527977 ZCCHC6Q5VYS8 1495 aaKnown RBP18.36■□□□□ 0.53
CLMP-202ENST00000527977 DCAF1Q9Y4B6 1507 aa18.32■□□□□ 0.52
CLMP-202ENST00000527977 SHROOM4Q9ULL8 1493 aa18.22■□□□□ 0.51
CLMP-202ENST00000527977 SCRIBQ14160 1630 aa18.2■□□□□ 0.5
CLMP-202ENST00000527977 CC2D2AQ9P2K1 1620 aa18.16■□□□□ 0.5
CLMP-202ENST00000527977 CECR2Q9BXF3 1484 aa18.14■□□□□ 0.49
CLMP-202ENST00000527977 EIF4G1Q04637 1599 aaKnown RBP18.08■□□□□ 0.49
CLMP-202ENST00000527977 DNAJC5Q9H3Z4 198 aa17.57■□□□□ 0.4
CLMP-202ENST00000527977 NCAPD3P42695 1498 aa17.48■□□□□ 0.39
CLMP-202ENST00000527977 ATAD2BQ9ULI0 1458 aa17.41■□□□□ 0.38
CLMP-202ENST00000527977 ERCC6Q03468 1493 aa17.37■□□□□ 0.37
CLMP-202ENST00000527977 CUX2O14529 1486 aa17.37■□□□□ 0.37
CLMP-202ENST00000527977 SMARCA4P51532 1647 aa17.34■□□□□ 0.37
CLMP-202ENST00000527977 SMARCA2P51531 1590 aa17.33■□□□□ 0.37
CLMP-202ENST00000527977 HMGXB3Q12766 1538 aa17.31■□□□□ 0.36
CLMP-202ENST00000527977 NESP48681 1621 aa17.26■□□□□ 0.35
CLMP-202ENST00000527977 BAZ1AQ9NRL2 1556 aaPredicted RBP17.23■□□□□ 0.35
CLMP-202ENST00000527977 BAZ1BQ9UIG0 1483 aaKnown RBP17.23■□□□□ 0.35
CLMP-202ENST00000527977 PEG3Q9GZU2 1588 aa17.16■□□□□ 0.34
CLMP-202ENST00000527977 MROH2BQ7Z745 1585 aa17.13■□□□□ 0.33
CLMP-202ENST00000527977 LAMC3Q9Y6N6 1575 aa17.08■□□□□ 0.32
CLMP-202ENST00000527977 THOC2Q8NI27 1593 aaKnown RBP17.06■□□□□ 0.32
CLMP-202ENST00000527977 PDS5BQ9NTI5 1447 aa17.01■□□□□ 0.31
CLMP-202ENST00000527977 KIF21AQ7Z4S6 1674 aa17■□□□□ 0.31
CLMP-202ENST00000527977 CADPSQ9ULU8 1353 aa16.95■□□□□ 0.3
CLMP-202ENST00000527977 WIZO95785 1651 aa16.91■□□□□ 0.3
CLMP-202ENST00000527977 MRC2Q9UBG0 1479 aa16.86■□□□□ 0.29
CLMP-202ENST00000527977 WDR62O43379 1518 aa16.81■□□□□ 0.28
CLMP-202ENST00000527977 CEP164Q9UPV0 1460 aa16.77■□□□□ 0.28
CLMP-202ENST00000527977 TRIM41Q8WV44 630 aa16.76■□□□□ 0.27
CLMP-202ENST00000527977 FANCD2Q9BXW9 1451 aa16.75■□□□□ 0.27
CLMP-202ENST00000527977 RSF1Q96T23 1441 aaPredicted RBP16.73■□□□□ 0.27
CLMP-202ENST00000527977 CFTRP13569 1480 aa16.72■□□□□ 0.27
CLMP-202ENST00000527977 TOP2AP11388 1531 aaKnown RBP16.66■□□□□ 0.26
CLMP-202ENST00000527977 URB2Q14146 1524 aaKnown RBP16.63■□□□□ 0.25
CLMP-202ENST00000527977 OSCARQ8IYS5 282 aa16.6■□□□□ 0.25
CLMP-202ENST00000527977 CCDC88BA6NC98 1476 aa16.51■□□□□ 0.23
CLMP-202ENST00000527977 PRDM2Q13029 1718 aa16.49■□□□□ 0.23
CLMP-202ENST00000527977 ZNF608Q9ULD9 1512 aaPredicted RBP16.45■□□□□ 0.22
CLMP-202ENST00000527977 IFT140Q96RY7 1462 aa16.44■□□□□ 0.22
CLMP-202ENST00000527977 TOPBP1Q92547 1522 aa16.42■□□□□ 0.22
CLMP-202ENST00000527977 ABCC8Q09428 1581 aa16.37■□□□□ 0.21
CLMP-202ENST00000527977 RIMBP3CA6NJZ7 1639 aa16.37■□□□□ 0.21
CLMP-202ENST00000527977 RIMBP3BA6NNM3 1639 aa16.37■□□□□ 0.21
CLMP-202ENST00000527977 RIMBP3Q9UFD9 1639 aa16.37■□□□□ 0.21
CLMP-202ENST00000527977 DNMBPQ6XZF7 1577 aa16.33■□□□□ 0.2
CLMP-202ENST00000527977 EIF4G3O43432 1585 aaKnown RBP16.32■□□□□ 0.2
CLMP-202ENST00000527977 ARHGEF11O15085 1522 aa16.3■□□□□ 0.2
CLMP-202ENST00000527977 AQRO60306 1485 aaKnown RBP eCLIP16.29■□□□□ 0.2
CLMP-202ENST00000527977 TARBP1Q13395 1621 aaKnown RBP16.28■□□□□ 0.2
CLMP-202ENST00000527977 CYB5RLQ6IPT4 315 aa16.25■□□□□ 0.19
CLMP-202ENST00000527977 POLA1P09884 1462 aaPredicted RBP16.24■□□□□ 0.19
CLMP-202ENST00000527977 FBLN2P98095 1184 aa16.24■□□□□ 0.19
CLMP-202ENST00000527977 CHD1O14646 1710 aa16.22■□□□□ 0.19
CLMP-202ENST00000527977 RAD54L2Q9Y4B4 1467 aa16.21■□□□□ 0.19
CLMP-202ENST00000527977 SOGA1O94964 1423 aa16.19■□□□□ 0.18
CLMP-202ENST00000527977 TDRD9Q8NDG6 1382 aaKnown RBP16.18■□□□□ 0.18
CLMP-202ENST00000527977 ARAP1Q96P48 1450 aa16.14■□□□□ 0.17
CLMP-202ENST00000527977 FGD5Q6ZNL6 1462 aa16.12■□□□□ 0.17
CLMP-202ENST00000527977 TRHP20396 242 aaPredicted RBP16.1■□□□□ 0.17
CLMP-202ENST00000527977 SNAPC4Q5SXM2 1469 aa16.1■□□□□ 0.17
CLMP-202ENST00000527977 CUX1P39880 1505 aa16.09■□□□□ 0.17
CLMP-202ENST00000527977 CHMP7Q8WUX9 453 aaPredicted RBP16.08■□□□□ 0.16
CLMP-202ENST00000527977 WDR97A6NE52 1622 aa16.06■□□□□ 0.16
CLMP-202ENST00000527977 GRIN2BQ13224 1484 aa16.04■□□□□ 0.16
CLMP-202ENST00000527977 MAGI1Q96QZ7 1491 aaPredicted RBP16.04■□□□□ 0.16
CLMP-202ENST00000527977 CLASP1Q7Z460 1538 aa16.04■□□□□ 0.16
CLMP-202ENST00000527977 SYNJ1O43426 1573 aa16■□□□□ 0.15
CLMP-202ENST00000527977 SYNJ2O15056 1496 aa16■□□□□ 0.15
CLMP-202ENST00000527977 GAPVD1Q14C86 1478 aa15.97■□□□□ 0.15
CLMP-202ENST00000527977 SUPT5HO00267 1087 aaKnown RBP15.94■□□□□ 0.14
CLMP-202ENST00000527977 PBRM1Q86U86 1689 aa15.94■□□□□ 0.14
CLMP-202ENST00000527977 ABCA10Q8WWZ4 1543 aa15.93■□□□□ 0.14
CLMP-202ENST00000527977 ABCA5Q8WWZ7 1642 aa15.9■□□□□ 0.14
CLMP-202ENST00000527977 WRNQ14191 1432 aaPredicted RBP eCLIP15.85■□□□□ 0.13
CLMP-202ENST00000527977 GRIN2AQ12879 1464 aa15.83■□□□□ 0.12
CLMP-202ENST00000527977 ERCC6L2Q5T890 1561 aa15.81■□□□□ 0.12
CLMP-202ENST00000527977 ADAMTS12P58397 1594 aa15.79■□□□□ 0.12
CLMP-202ENST00000527977 TOP2BQ02880 1626 aa15.78■□□□□ 0.12
CLMP-202ENST00000527977 CEP170Q5SW79 1584 aa15.78■□□□□ 0.12
CLMP-202ENST00000527977 NUP160Q12769 1436 aa15.77■□□□□ 0.12
CLMP-202ENST00000527977 BIVM-ERCC5R4GMW8 1640 aa15.77■□□□□ 0.12
CLMP-202ENST00000527977 FHAD1B1AJZ9 1412 aa15.76■□□□□ 0.11
CLMP-202ENST00000527977 AEBP2Q6ZN18 517 aaPredicted RBP15.72■□□□□ 0.11
CLMP-202ENST00000527977 ERICH3Q5RHP9 1530 aa15.71■□□□□ 0.11
CLMP-202ENST00000527977 SHROOM2Q13796 1616 aa15.71■□□□□ 0.11
CLMP-202ENST00000527977 JPH4Q96JJ6 628 aa15.67■□□□□ 0.1
CLMP-202ENST00000527977 PRG4Q92954 1404 aaPredicted RBP15.66■□□□□ 0.1
CLMP-202ENST00000527977 KIF13AQ9H1H9 1805 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms