RNA–Protein interactions for RNA: ENST00000527959.1

BBS1-213, Transcript of Bardet-Biedl syndrome 1, humanhuman

TSL 2

Gene BBS1, Length 734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1-213ENST00000527959 NISCHQ9Y2I1 1504 aa32.93■■■□□ 2.86
BBS1-213ENST00000527959 CCDC180Q9P1Z9 1646 aa29.55■■■□□ 2.32
BBS1-213ENST00000527959 ABCC9O60706 1549 aa29.38■■■□□ 2.29
BBS1-213ENST00000527959 RB1CC1Q8TDY2 1594 aa28.07■■■□□ 2.08
BBS1-213ENST00000527959 NACADO15069 1562 aa27.92■■■□□ 2.06
BBS1-213ENST00000527959 DCAF8L2P0C7V8 631 aa27.65■■■□□ 2.02
BBS1-213ENST00000527959 MYO15BQ96JP2 1530 aa27.62■■■□□ 2.01
BBS1-213ENST00000527959 DNAJC5BQ9UF47 199 aa27.53■■■□□ 2
BBS1-213ENST00000527959 UNC13AQ9UPW8 1703 aa27.43■■□□□ 1.98
BBS1-213ENST00000527959 PABPN1Q86U42 306 aaKnown RBP eCLIP27.35■■□□□ 1.97
BBS1-213ENST00000527959 ZCCHC6Q5VYS8 1495 aaKnown RBP27.3■■□□□ 1.96
BBS1-213ENST00000527959 DCAF1Q9Y4B6 1507 aa27.26■■□□□ 1.96
BBS1-213ENST00000527959 BICRAQ9NZM4 1560 aa27.25■■□□□ 1.95
BBS1-213ENST00000527959 SHROOM4Q9ULL8 1493 aa26.95■■□□□ 1.91
BBS1-213ENST00000527959 SCRIBQ14160 1630 aa26.83■■□□□ 1.89
BBS1-213ENST00000527959 CC2D2AQ9P2K1 1620 aa26.59■■□□□ 1.85
BBS1-213ENST00000527959 EIF4G1Q04637 1599 aaKnown RBP26.55■■□□□ 1.84
BBS1-213ENST00000527959 CECR2Q9BXF3 1484 aa26.49■■□□□ 1.83
BBS1-213ENST00000527959 NCAPD3P42695 1498 aa25.78■■□□□ 1.72
BBS1-213ENST00000527959 ATAD2BQ9ULI0 1458 aa25.67■■□□□ 1.7
BBS1-213ENST00000527959 SMARCA4P51532 1647 aa25.66■■□□□ 1.7
BBS1-213ENST00000527959 SMARCA2P51531 1590 aa25.63■■□□□ 1.69
BBS1-213ENST00000527959 HMGXB3Q12766 1538 aa25.58■■□□□ 1.69
BBS1-213ENST00000527959 BAZ1AQ9NRL2 1556 aaPredicted RBP25.56■■□□□ 1.68
BBS1-213ENST00000527959 PEG3Q9GZU2 1588 aa25.47■■□□□ 1.67
BBS1-213ENST00000527959 BAZ1BQ9UIG0 1483 aaKnown RBP25.41■■□□□ 1.66
BBS1-213ENST00000527959 CUX2O14529 1486 aa25.37■■□□□ 1.65
BBS1-213ENST00000527959 ERCC6Q03468 1493 aa25.37■■□□□ 1.65
BBS1-213ENST00000527959 MROH2BQ7Z745 1585 aa25.35■■□□□ 1.65
BBS1-213ENST00000527959 NESP48681 1621 aa25.27■■□□□ 1.64
BBS1-213ENST00000527959 DNAJC5Q9H3Z4 198 aa25.27■■□□□ 1.64
BBS1-213ENST00000527959 LAMC3Q9Y6N6 1575 aa25.18■■□□□ 1.62
BBS1-213ENST00000527959 THOC2Q8NI27 1593 aaKnown RBP25.04■■□□□ 1.6
BBS1-213ENST00000527959 WIZO95785 1651 aa25.04■■□□□ 1.6
BBS1-213ENST00000527959 PDS5BQ9NTI5 1447 aa25.01■■□□□ 1.59
BBS1-213ENST00000527959 CADPSQ9ULU8 1353 aa24.97■■□□□ 1.59
BBS1-213ENST00000527959 KIF21AQ7Z4S6 1674 aa24.97■■□□□ 1.59
BBS1-213ENST00000527959 RSF1Q96T23 1441 aaPredicted RBP24.86■■□□□ 1.57
BBS1-213ENST00000527959 MRC2Q9UBG0 1479 aa24.77■■□□□ 1.56
BBS1-213ENST00000527959 TOP2AP11388 1531 aaKnown RBP24.75■■□□□ 1.55
BBS1-213ENST00000527959 WDR62O43379 1518 aa24.73■■□□□ 1.55
BBS1-213ENST00000527959 CFTRP13569 1480 aa24.71■■□□□ 1.55
BBS1-213ENST00000527959 CEP164Q9UPV0 1460 aa24.68■■□□□ 1.54
BBS1-213ENST00000527959 FANCD2Q9BXW9 1451 aa24.66■■□□□ 1.54
BBS1-213ENST00000527959 PRDM2Q13029 1718 aa24.48■■□□□ 1.51
BBS1-213ENST00000527959 CCDC88BA6NC98 1476 aa24.47■■□□□ 1.51
BBS1-213ENST00000527959 URB2Q14146 1524 aaKnown RBP24.45■■□□□ 1.51
BBS1-213ENST00000527959 ABCC8Q09428 1581 aa24.21■■□□□ 1.47
BBS1-213ENST00000527959 TOPBP1Q92547 1522 aa24.21■■□□□ 1.47
BBS1-213ENST00000527959 IFT140Q96RY7 1462 aa24.2■■□□□ 1.47
BBS1-213ENST00000527959 OSCARQ8IYS5 282 aa24.2■■□□□ 1.46
BBS1-213ENST00000527959 DNMBPQ6XZF7 1577 aa24.14■■□□□ 1.45
BBS1-213ENST00000527959 ZNF608Q9ULD9 1512 aaPredicted RBP24.12■■□□□ 1.45
BBS1-213ENST00000527959 TRIM41Q8WV44 630 aa24.07■■□□□ 1.44
BBS1-213ENST00000527959 TARBP1Q13395 1621 aaKnown RBP24.02■■□□□ 1.44
BBS1-213ENST00000527959 EIF4G3O43432 1585 aaKnown RBP24■■□□□ 1.43
BBS1-213ENST00000527959 POLA1P09884 1462 aaPredicted RBP23.96■■□□□ 1.43
BBS1-213ENST00000527959 AQRO60306 1485 aaKnown RBP eCLIP23.92■■□□□ 1.42
BBS1-213ENST00000527959 SOGA1O94964 1423 aa23.86■■□□□ 1.41
BBS1-213ENST00000527959 RIMBP3CA6NJZ7 1639 aa23.86■■□□□ 1.41
BBS1-213ENST00000527959 RIMBP3BA6NNM3 1639 aa23.86■■□□□ 1.41
BBS1-213ENST00000527959 RIMBP3Q9UFD9 1639 aa23.86■■□□□ 1.41
BBS1-213ENST00000527959 RAD54L2Q9Y4B4 1467 aa23.85■■□□□ 1.41
BBS1-213ENST00000527959 WDR97A6NE52 1622 aa23.81■■□□□ 1.4
BBS1-213ENST00000527959 CUX1P39880 1505 aa23.81■■□□□ 1.4
BBS1-213ENST00000527959 CHD1O14646 1710 aa23.81■■□□□ 1.4
BBS1-213ENST00000527959 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
BBS1-213ENST00000527959 ARHGEF11O15085 1522 aa23.79■■□□□ 1.4
BBS1-213ENST00000527959 TDRD9Q8NDG6 1382 aaKnown RBP23.78■■□□□ 1.4
BBS1-213ENST00000527959 SUPT5HO00267 1087 aaKnown RBP23.73■■□□□ 1.39
BBS1-213ENST00000527959 FBLN2P98095 1184 aa23.7■■□□□ 1.38
BBS1-213ENST00000527959 SNAPC4Q5SXM2 1469 aa23.67■■□□□ 1.38
BBS1-213ENST00000527959 MAGI1Q96QZ7 1491 aaPredicted RBP23.66■■□□□ 1.38
BBS1-213ENST00000527959 GRIN2BQ13224 1484 aa23.65■■□□□ 1.38
BBS1-213ENST00000527959 ABCA10Q8WWZ4 1543 aa23.59■■□□□ 1.37
BBS1-213ENST00000527959 CYB5RLQ6IPT4 315 aa23.58■■□□□ 1.37
BBS1-213ENST00000527959 CHMP7Q8WUX9 453 aaPredicted RBP23.58■■□□□ 1.37
BBS1-213ENST00000527959 SYNJ2O15056 1496 aa23.57■■□□□ 1.36
BBS1-213ENST00000527959 GAPVD1Q14C86 1478 aa23.57■■□□□ 1.36
BBS1-213ENST00000527959 CLASP1Q7Z460 1538 aa23.57■■□□□ 1.36
BBS1-213ENST00000527959 ARAP1Q96P48 1450 aa23.56■■□□□ 1.36
BBS1-213ENST00000527959 PBRM1Q86U86 1689 aa23.55■■□□□ 1.36
BBS1-213ENST00000527959 SYNJ1O43426 1573 aa23.55■■□□□ 1.36
BBS1-213ENST00000527959 ABCA5Q8WWZ7 1642 aa23.54■■□□□ 1.36
BBS1-213ENST00000527959 WRNQ14191 1432 aaPredicted RBP eCLIP23.5■■□□□ 1.35
BBS1-213ENST00000527959 BIVM-ERCC5R4GMW8 1640 aa23.48■■□□□ 1.35
BBS1-213ENST00000527959 TOP2BQ02880 1626 aa23.48■■□□□ 1.35
BBS1-213ENST00000527959 GRIN2AQ12879 1464 aa23.35■■□□□ 1.33
BBS1-213ENST00000527959 ADAMTS12P58397 1594 aa23.33■■□□□ 1.33
BBS1-213ENST00000527959 ERICH3Q5RHP9 1530 aa23.3■■□□□ 1.32
BBS1-213ENST00000527959 FHAD1B1AJZ9 1412 aa23.29■■□□□ 1.32
BBS1-213ENST00000527959 NUP160Q12769 1436 aa23.28■■□□□ 1.32
BBS1-213ENST00000527959 TRHP20396 242 aaPredicted RBP23.27■■□□□ 1.32
BBS1-213ENST00000527959 CEP170Q5SW79 1584 aa23.24■■□□□ 1.31
BBS1-213ENST00000527959 SHROOM2Q13796 1616 aa23.19■■□□□ 1.3
BBS1-213ENST00000527959 ERCC6L2Q5T890 1561 aa23.16■■□□□ 1.3
BBS1-213ENST00000527959 JPH4Q96JJ6 628 aa23.03■■□□□ 1.28
BBS1-213ENST00000527959 PRG4Q92954 1404 aaPredicted RBP23.02■■□□□ 1.28
BBS1-213ENST00000527959 IGF1RP08069 1367 aa23.01■■□□□ 1.27
BBS1-213ENST00000527959 KIF27Q86VH2 1401 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms