RNA–Protein interactions for RNA: ENST00000527951.5

PDZD3-208, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-208ENST00000527951 NISCHQ9Y2I1 1504 aa43.82■■■■■ 4.61
PDZD3-208ENST00000527951 ABCC9O60706 1549 aa39.85■■■■□ 3.97
PDZD3-208ENST00000527951 CCDC180Q9P1Z9 1646 aa39.58■■■■□ 3.93
PDZD3-208ENST00000527951 RB1CC1Q8TDY2 1594 aa37.78■■■■□ 3.64
PDZD3-208ENST00000527951 DNAJC5BQ9UF47 199 aa37.77■■■■□ 3.64
PDZD3-208ENST00000527951 NACADO15069 1562 aa37.44■■■■□ 3.58
PDZD3-208ENST00000527951 UNC13AQ9UPW8 1703 aa37.1■■■■□ 3.53
PDZD3-208ENST00000527951 PABPN1Q86U42 306 aaKnown RBP eCLIP36.96■■■■□ 3.51
PDZD3-208ENST00000527951 DCAF8L2P0C7V8 631 aa36.9■■■■□ 3.5
PDZD3-208ENST00000527951 MYO15BQ96JP2 1530 aa36.83■■■■□ 3.49
PDZD3-208ENST00000527951 BICRAQ9NZM4 1560 aa36.8■■■■□ 3.48
PDZD3-208ENST00000527951 ZCCHC6Q5VYS8 1495 aaKnown RBP36.26■■■■□ 3.4
PDZD3-208ENST00000527951 DCAF1Q9Y4B6 1507 aa36.2■■■■□ 3.39
PDZD3-208ENST00000527951 SHROOM4Q9ULL8 1493 aa36.19■■■■□ 3.38
PDZD3-208ENST00000527951 CC2D2AQ9P2K1 1620 aa36.05■■■■□ 3.36
PDZD3-208ENST00000527951 SCRIBQ14160 1630 aa35.97■■■■□ 3.35
PDZD3-208ENST00000527951 CECR2Q9BXF3 1484 aa35.94■■■■□ 3.34
PDZD3-208ENST00000527951 EIF4G1Q04637 1599 aaKnown RBP35.87■■■■□ 3.33
PDZD3-208ENST00000527951 DNAJC5Q9H3Z4 198 aa34.93■■■■□ 3.18
PDZD3-208ENST00000527951 NCAPD3P42695 1498 aa34.56■■■■□ 3.12
PDZD3-208ENST00000527951 CUX2O14529 1486 aa34.53■■■■□ 3.12
PDZD3-208ENST00000527951 ATAD2BQ9ULI0 1458 aa34.39■■■■□ 3.1
PDZD3-208ENST00000527951 ERCC6Q03468 1493 aa34.38■■■■□ 3.09
PDZD3-208ENST00000527951 HMGXB3Q12766 1538 aa34.3■■■■□ 3.08
PDZD3-208ENST00000527951 SMARCA4P51532 1647 aa34.3■■■■□ 3.08
PDZD3-208ENST00000527951 SMARCA2P51531 1590 aa34.27■■■■□ 3.08
PDZD3-208ENST00000527951 NESP48681 1621 aa34.15■■■■□ 3.06
PDZD3-208ENST00000527951 BAZ1AQ9NRL2 1556 aaPredicted RBP34.02■■■■□ 3.04
PDZD3-208ENST00000527951 PEG3Q9GZU2 1588 aa34.01■■■■□ 3.03
PDZD3-208ENST00000527951 BAZ1BQ9UIG0 1483 aaKnown RBP34.01■■■■□ 3.03
PDZD3-208ENST00000527951 THOC2Q8NI27 1593 aaKnown RBP33.98■■■■□ 3.03
PDZD3-208ENST00000527951 LAMC3Q9Y6N6 1575 aa33.86■■■■□ 3.01
PDZD3-208ENST00000527951 KIF21AQ7Z4S6 1674 aa33.77■■■■□ 3
PDZD3-208ENST00000527951 MROH2BQ7Z745 1585 aa33.77■■■■□ 3
PDZD3-208ENST00000527951 PDS5BQ9NTI5 1447 aa33.59■■■□□ 2.97
PDZD3-208ENST00000527951 CADPSQ9ULU8 1353 aa33.44■■■□□ 2.94
PDZD3-208ENST00000527951 MRC2Q9UBG0 1479 aa33.38■■■□□ 2.93
PDZD3-208ENST00000527951 WDR62O43379 1518 aa33.38■■■□□ 2.93
PDZD3-208ENST00000527951 WIZO95785 1651 aa33.36■■■□□ 2.93
PDZD3-208ENST00000527951 CEP164Q9UPV0 1460 aa33.15■■■□□ 2.9
PDZD3-208ENST00000527951 TRIM41Q8WV44 630 aa33.13■■■□□ 2.89
PDZD3-208ENST00000527951 FANCD2Q9BXW9 1451 aa33.08■■■□□ 2.89
PDZD3-208ENST00000527951 CFTRP13569 1480 aa33.03■■■□□ 2.88
PDZD3-208ENST00000527951 TOP2AP11388 1531 aaKnown RBP32.89■■■□□ 2.86
PDZD3-208ENST00000527951 URB2Q14146 1524 aaKnown RBP32.89■■■□□ 2.86
PDZD3-208ENST00000527951 RSF1Q96T23 1441 aaPredicted RBP32.88■■■□□ 2.85
PDZD3-208ENST00000527951 PRDM2Q13029 1718 aa32.79■■■□□ 2.84
PDZD3-208ENST00000527951 OSCARQ8IYS5 282 aa32.77■■■□□ 2.84
PDZD3-208ENST00000527951 RIMBP3CA6NJZ7 1639 aa32.55■■■□□ 2.8
PDZD3-208ENST00000527951 RIMBP3BA6NNM3 1639 aa32.55■■■□□ 2.8
PDZD3-208ENST00000527951 RIMBP3Q9UFD9 1639 aa32.55■■■□□ 2.8
PDZD3-208ENST00000527951 ZNF608Q9ULD9 1512 aaPredicted RBP32.54■■■□□ 2.8
PDZD3-208ENST00000527951 IFT140Q96RY7 1462 aa32.5■■■□□ 2.79
PDZD3-208ENST00000527951 CCDC88BA6NC98 1476 aa32.48■■■□□ 2.79
PDZD3-208ENST00000527951 TOPBP1Q92547 1522 aa32.45■■■□□ 2.78
PDZD3-208ENST00000527951 ARHGEF11O15085 1522 aa32.38■■■□□ 2.77
PDZD3-208ENST00000527951 EIF4G3O43432 1585 aaKnown RBP32.37■■■□□ 2.77
PDZD3-208ENST00000527951 DNMBPQ6XZF7 1577 aa32.3■■■□□ 2.76
PDZD3-208ENST00000527951 ABCC8Q09428 1581 aa32.28■■■□□ 2.76
PDZD3-208ENST00000527951 TARBP1Q13395 1621 aaKnown RBP32.25■■■□□ 2.75
PDZD3-208ENST00000527951 CHD1O14646 1710 aa32.24■■■□□ 2.75
PDZD3-208ENST00000527951 AQRO60306 1485 aaKnown RBP eCLIP32.14■■■□□ 2.74
PDZD3-208ENST00000527951 POLA1P09884 1462 aaPredicted RBP32.09■■■□□ 2.73
PDZD3-208ENST00000527951 ARAP1Q96P48 1450 aa32.05■■■□□ 2.72
PDZD3-208ENST00000527951 CYB5RLQ6IPT4 315 aa32.03■■■□□ 2.72
PDZD3-208ENST00000527951 RAD54L2Q9Y4B4 1467 aa31.95■■■□□ 2.7
PDZD3-208ENST00000527951 WDR97A6NE52 1622 aa31.86■■■□□ 2.69
PDZD3-208ENST00000527951 FBLN2P98095 1184 aa31.86■■■□□ 2.69
PDZD3-208ENST00000527951 CLASP1Q7Z460 1538 aa31.85■■■□□ 2.69
PDZD3-208ENST00000527951 SOGA1O94964 1423 aa31.84■■■□□ 2.69
PDZD3-208ENST00000527951 TDRD9Q8NDG6 1382 aaKnown RBP31.84■■■□□ 2.69
PDZD3-208ENST00000527951 SNAPC4Q5SXM2 1469 aa31.83■■■□□ 2.69
PDZD3-208ENST00000527951 FGD5Q6ZNL6 1462 aa31.81■■■□□ 2.68
PDZD3-208ENST00000527951 CUX1P39880 1505 aa31.76■■■□□ 2.68
PDZD3-208ENST00000527951 TRHP20396 242 aaPredicted RBP31.74■■■□□ 2.67
PDZD3-208ENST00000527951 MAGI1Q96QZ7 1491 aaPredicted RBP31.72■■■□□ 2.67
PDZD3-208ENST00000527951 SYNJ1O43426 1573 aa31.71■■■□□ 2.67
PDZD3-208ENST00000527951 GRIN2BQ13224 1484 aa31.65■■■□□ 2.66
PDZD3-208ENST00000527951 SYNJ2O15056 1496 aa31.62■■■□□ 2.65
PDZD3-208ENST00000527951 PBRM1Q86U86 1689 aa31.62■■■□□ 2.65
PDZD3-208ENST00000527951 CHMP7Q8WUX9 453 aaPredicted RBP31.59■■■□□ 2.65
PDZD3-208ENST00000527951 ABCA5Q8WWZ7 1642 aa31.49■■■□□ 2.63
PDZD3-208ENST00000527951 GAPVD1Q14C86 1478 aa31.49■■■□□ 2.63
PDZD3-208ENST00000527951 ABCA10Q8WWZ4 1543 aa31.44■■■□□ 2.62
PDZD3-208ENST00000527951 ERCC6L2Q5T890 1561 aa31.32■■■□□ 2.6
PDZD3-208ENST00000527951 GRIN2AQ12879 1464 aa31.28■■■□□ 2.6
PDZD3-208ENST00000527951 ADAMTS12P58397 1594 aa31.27■■■□□ 2.6
PDZD3-208ENST00000527951 CEP170Q5SW79 1584 aa31.24■■■□□ 2.59
PDZD3-208ENST00000527951 NUP160Q12769 1436 aa31.22■■■□□ 2.59
PDZD3-208ENST00000527951 SHROOM2Q13796 1616 aa31.19■■■□□ 2.58
PDZD3-208ENST00000527951 BIVM-ERCC5R4GMW8 1640 aa31.18■■■□□ 2.58
PDZD3-208ENST00000527951 WRNQ14191 1432 aaPredicted RBP eCLIP31.15■■■□□ 2.58
PDZD3-208ENST00000527951 TOP2BQ02880 1626 aa31.13■■■□□ 2.57
PDZD3-208ENST00000527951 AEBP2Q6ZN18 517 aaPredicted RBP31.08■■■□□ 2.57
PDZD3-208ENST00000527951 FHAD1B1AJZ9 1412 aa31.07■■■□□ 2.56
PDZD3-208ENST00000527951 ERICH3Q5RHP9 1530 aa31.03■■■□□ 2.56
PDZD3-208ENST00000527951 KIF13AQ9H1H9 1805 aa31.03■■■□□ 2.56
PDZD3-208ENST00000527951 SUPT5HO00267 1087 aaKnown RBP30.95■■■□□ 2.55
PDZD3-208ENST00000527951 PRG4Q92954 1404 aaPredicted RBP30.87■■■□□ 2.53
PDZD3-208ENST00000527951 RUSC2Q8N2Y8 1516 aa30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms