RNA–Protein interactions for RNA: ENST00000527921.1

CHD7-207, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 4

Gene CHD7, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-207ENST00000527921 NISCHQ9Y2I1 1504 aa30.38■■■□□ 2.45
CHD7-207ENST00000527921 CCDC180Q9P1Z9 1646 aa27.25■■□□□ 1.95
CHD7-207ENST00000527921 ABCC9O60706 1549 aa27.2■■□□□ 1.94
CHD7-207ENST00000527921 RB1CC1Q8TDY2 1594 aa25.9■■□□□ 1.74
CHD7-207ENST00000527921 NACADO15069 1562 aa25.75■■□□□ 1.71
CHD7-207ENST00000527921 DNAJC5BQ9UF47 199 aa25.58■■□□□ 1.69
CHD7-207ENST00000527921 DCAF8L2P0C7V8 631 aa25.5■■□□□ 1.67
CHD7-207ENST00000527921 MYO15BQ96JP2 1530 aa25.45■■□□□ 1.66
CHD7-207ENST00000527921 UNC13AQ9UPW8 1703 aa25.37■■□□□ 1.65
CHD7-207ENST00000527921 PABPN1Q86U42 306 aaKnown RBP eCLIP25.32■■□□□ 1.64
CHD7-207ENST00000527921 BICRAQ9NZM4 1560 aa25.23■■□□□ 1.63
CHD7-207ENST00000527921 ZCCHC6Q5VYS8 1495 aaKnown RBP25.2■■□□□ 1.62
CHD7-207ENST00000527921 DCAF1Q9Y4B6 1507 aa25.12■■□□□ 1.61
CHD7-207ENST00000527921 SHROOM4Q9ULL8 1493 aa24.84■■□□□ 1.57
CHD7-207ENST00000527921 SCRIBQ14160 1630 aa24.8■■□□□ 1.56
CHD7-207ENST00000527921 CC2D2AQ9P2K1 1620 aa24.61■■□□□ 1.53
CHD7-207ENST00000527921 EIF4G1Q04637 1599 aaKnown RBP24.56■■□□□ 1.52
CHD7-207ENST00000527921 CECR2Q9BXF3 1484 aa24.51■■□□□ 1.51
CHD7-207ENST00000527921 NCAPD3P42695 1498 aa23.8■■□□□ 1.4
CHD7-207ENST00000527921 ATAD2BQ9ULI0 1458 aa23.72■■□□□ 1.39
CHD7-207ENST00000527921 SMARCA4P51532 1647 aa23.7■■□□□ 1.38
CHD7-207ENST00000527921 SMARCA2P51531 1590 aa23.62■■□□□ 1.37
CHD7-207ENST00000527921 HMGXB3Q12766 1538 aa23.61■■□□□ 1.37
CHD7-207ENST00000527921 BAZ1AQ9NRL2 1556 aaPredicted RBP23.56■■□□□ 1.36
CHD7-207ENST00000527921 PEG3Q9GZU2 1588 aa23.5■■□□□ 1.35
CHD7-207ENST00000527921 CUX2O14529 1486 aa23.45■■□□□ 1.34
CHD7-207ENST00000527921 BAZ1BQ9UIG0 1483 aaKnown RBP23.44■■□□□ 1.34
CHD7-207ENST00000527921 ERCC6Q03468 1493 aa23.43■■□□□ 1.34
CHD7-207ENST00000527921 DNAJC5Q9H3Z4 198 aa23.43■■□□□ 1.34
CHD7-207ENST00000527921 MROH2BQ7Z745 1585 aa23.42■■□□□ 1.34
CHD7-207ENST00000527921 NESP48681 1621 aa23.41■■□□□ 1.34
CHD7-207ENST00000527921 LAMC3Q9Y6N6 1575 aa23.23■■□□□ 1.31
CHD7-207ENST00000527921 THOC2Q8NI27 1593 aaKnown RBP23.18■■□□□ 1.3
CHD7-207ENST00000527921 WIZO95785 1651 aa23.13■■□□□ 1.29
CHD7-207ENST00000527921 KIF21AQ7Z4S6 1674 aa23.09■■□□□ 1.29
CHD7-207ENST00000527921 PDS5BQ9NTI5 1447 aa23.07■■□□□ 1.28
CHD7-207ENST00000527921 CADPSQ9ULU8 1353 aa23.05■■□□□ 1.28
CHD7-207ENST00000527921 RSF1Q96T23 1441 aaPredicted RBP22.94■■□□□ 1.26
CHD7-207ENST00000527921 MRC2Q9UBG0 1479 aa22.88■■□□□ 1.25
CHD7-207ENST00000527921 WDR62O43379 1518 aa22.86■■□□□ 1.25
CHD7-207ENST00000527921 TOP2AP11388 1531 aaKnown RBP22.82■■□□□ 1.24
CHD7-207ENST00000527921 CFTRP13569 1480 aa22.81■■□□□ 1.24
CHD7-207ENST00000527921 FANCD2Q9BXW9 1451 aa22.78■■□□□ 1.24
CHD7-207ENST00000527921 CEP164Q9UPV0 1460 aa22.78■■□□□ 1.24
CHD7-207ENST00000527921 URB2Q14146 1524 aaKnown RBP22.62■■□□□ 1.21
CHD7-207ENST00000527921 CCDC88BA6NC98 1476 aa22.58■■□□□ 1.2
CHD7-207ENST00000527921 PRDM2Q13029 1718 aa22.56■■□□□ 1.2
CHD7-207ENST00000527921 TOPBP1Q92547 1522 aa22.36■■□□□ 1.17
CHD7-207ENST00000527921 OSCARQ8IYS5 282 aa22.35■■□□□ 1.17
CHD7-207ENST00000527921 ZNF608Q9ULD9 1512 aaPredicted RBP22.34■■□□□ 1.17
CHD7-207ENST00000527921 IFT140Q96RY7 1462 aa22.34■■□□□ 1.17
CHD7-207ENST00000527921 TRIM41Q8WV44 630 aa22.32■■□□□ 1.16
CHD7-207ENST00000527921 ABCC8Q09428 1581 aa22.28■■□□□ 1.16
CHD7-207ENST00000527921 DNMBPQ6XZF7 1577 aa22.27■■□□□ 1.16
CHD7-207ENST00000527921 EIF4G3O43432 1585 aaKnown RBP22.2■■□□□ 1.14
CHD7-207ENST00000527921 TARBP1Q13395 1621 aaKnown RBP22.2■■□□□ 1.14
CHD7-207ENST00000527921 POLA1P09884 1462 aaPredicted RBP22.14■■□□□ 1.13
CHD7-207ENST00000527921 AQRO60306 1485 aaKnown RBP eCLIP22.11■■□□□ 1.134e-6■■■■■ 31
CHD7-207ENST00000527921 RIMBP3CA6NJZ7 1639 aa22.1■■□□□ 1.13
CHD7-207ENST00000527921 RIMBP3BA6NNM3 1639 aa22.1■■□□□ 1.13
CHD7-207ENST00000527921 RIMBP3Q9UFD9 1639 aa22.1■■□□□ 1.13
CHD7-207ENST00000527921 RAD54L2Q9Y4B4 1467 aa22.05■■□□□ 1.12
CHD7-207ENST00000527921 ARHGEF11O15085 1522 aa22.03■■□□□ 1.12
CHD7-207ENST00000527921 CHD1O14646 1710 aa22.02■■□□□ 1.12
CHD7-207ENST00000527921 CUX1P39880 1505 aa22.01■■□□□ 1.11
CHD7-207ENST00000527921 SOGA1O94964 1423 aa22■■□□□ 1.11
CHD7-207ENST00000527921 FGD5Q6ZNL6 1462 aa21.98■■□□□ 1.11
CHD7-207ENST00000527921 TDRD9Q8NDG6 1382 aaKnown RBP21.97■■□□□ 1.11
CHD7-207ENST00000527921 WDR97A6NE52 1622 aa21.94■■□□□ 1.1
CHD7-207ENST00000527921 SNAPC4Q5SXM2 1469 aa21.88■■□□□ 1.09
CHD7-207ENST00000527921 FBLN2P98095 1184 aa21.87■■□□□ 1.09
CHD7-207ENST00000527921 ARAP1Q96P48 1450 aa21.83■■□□□ 1.08
CHD7-207ENST00000527921 MAGI1Q96QZ7 1491 aaPredicted RBP21.83■■□□□ 1.08
CHD7-207ENST00000527921 SUPT5HO00267 1087 aaKnown RBP21.82■■□□□ 1.08
CHD7-207ENST00000527921 GRIN2BQ13224 1484 aa21.82■■□□□ 1.08
CHD7-207ENST00000527921 CYB5RLQ6IPT4 315 aa21.81■■□□□ 1.08
CHD7-207ENST00000527921 CLASP1Q7Z460 1538 aa21.8■■□□□ 1.08
CHD7-207ENST00000527921 SYNJ2O15056 1496 aa21.76■■□□□ 1.07
CHD7-207ENST00000527921 ABCA10Q8WWZ4 1543 aa21.75■■□□□ 1.07
CHD7-207ENST00000527921 GAPVD1Q14C86 1478 aa21.75■■□□□ 1.07
CHD7-207ENST00000527921 CHMP7Q8WUX9 453 aaPredicted RBP21.74■■□□□ 1.07
CHD7-207ENST00000527921 PBRM1Q86U86 1689 aa21.74■■□□□ 1.07
CHD7-207ENST00000527921 ABCA5Q8WWZ7 1642 aa21.73■■□□□ 1.07
CHD7-207ENST00000527921 SYNJ1O43426 1573 aa21.73■■□□□ 1.07
CHD7-207ENST00000527921 BIVM-ERCC5R4GMW8 1640 aa21.65■■□□□ 1.06
CHD7-207ENST00000527921 TOP2BQ02880 1626 aa21.64■■□□□ 1.05
CHD7-207ENST00000527921 WRNQ14191 1432 aaPredicted RBP eCLIP21.63■■□□□ 1.05
CHD7-207ENST00000527921 GRIN2AQ12879 1464 aa21.55■■□□□ 1.04
CHD7-207ENST00000527921 ADAMTS12P58397 1594 aa21.55■■□□□ 1.04
CHD7-207ENST00000527921 NUP160Q12769 1436 aa21.51■■□□□ 1.03
CHD7-207ENST00000527921 TRHP20396 242 aaPredicted RBP21.5■■□□□ 1.03
CHD7-207ENST00000527921 CEP170Q5SW79 1584 aa21.49■■□□□ 1.03
CHD7-207ENST00000527921 ERICH3Q5RHP9 1530 aa21.48■■□□□ 1.03
CHD7-207ENST00000527921 ERCC6L2Q5T890 1561 aa21.48■■□□□ 1.03
CHD7-207ENST00000527921 FHAD1B1AJZ9 1412 aa21.47■■□□□ 1.03
CHD7-207ENST00000527921 SHROOM2Q13796 1616 aa21.42■■□□□ 1.02
CHD7-207ENST00000527921 RUSC2Q8N2Y8 1516 aa21.25■□□□□ 0.99
CHD7-207ENST00000527921 PRG4Q92954 1404 aaPredicted RBP21.25■□□□□ 0.99
CHD7-207ENST00000527921 JPH4Q96JJ6 628 aa21.23■□□□□ 0.99
CHD7-207ENST00000527921 IGF1RP08069 1367 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms