RNA–Protein interactions for RNA: ENST00000527906.5

PSMC3-204, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 3

Gene PSMC3, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-204ENST00000527906 NISCHQ9Y2I1 1504 aa25.7■■□□□ 1.7
PSMC3-204ENST00000527906 ABCC9O60706 1549 aa24.09■■□□□ 1.45
PSMC3-204ENST00000527906 CCDC180Q9P1Z9 1646 aa23.32■■□□□ 1.32
PSMC3-204ENST00000527906 DNAJC5BQ9UF47 199 aa23.24■■□□□ 1.31
PSMC3-204ENST00000527906 RB1CC1Q8TDY2 1594 aa22.57■■□□□ 1.2
PSMC3-204ENST00000527906 PABPN1Q86U42 306 aaKnown RBP eCLIP22.33■■□□□ 1.17
PSMC3-204ENST00000527906 NACADO15069 1562 aa22.25■■□□□ 1.15
PSMC3-204ENST00000527906 DCAF8L2P0C7V8 631 aa22.03■■□□□ 1.12
PSMC3-204ENST00000527906 UNC13AQ9UPW8 1703 aa21.99■■□□□ 1.11
PSMC3-204ENST00000527906 BICRAQ9NZM4 1560 aa21.95■■□□□ 1.1
PSMC3-204ENST00000527906 DNAJC5Q9H3Z4 198 aa21.85■■□□□ 1.09
PSMC3-204ENST00000527906 CECR2Q9BXF3 1484 aa21.77■■□□□ 1.08
PSMC3-204ENST00000527906 MYO15BQ96JP2 1530 aa21.71■■□□□ 1.07
PSMC3-204ENST00000527906 CC2D2AQ9P2K1 1620 aa21.69■■□□□ 1.06
PSMC3-204ENST00000527906 SHROOM4Q9ULL8 1493 aa21.58■■□□□ 1.05
PSMC3-204ENST00000527906 ZCCHC6Q5VYS8 1495 aaKnown RBP21.52■■□□□ 1.03
PSMC3-204ENST00000527906 EIF4G1Q04637 1599 aaKnown RBP21.48■■□□□ 1.03
PSMC3-204ENST00000527906 DCAF1Q9Y4B6 1507 aa21.37■■□□□ 1.01
PSMC3-204ENST00000527906 SCRIBQ14160 1630 aa21.25■□□□□ 0.99
PSMC3-204ENST00000527906 CUX2O14529 1486 aa21.04■□□□□ 0.96
PSMC3-204ENST00000527906 ERCC6Q03468 1493 aa20.84■□□□□ 0.93
PSMC3-204ENST00000527906 TRIM41Q8WV44 630 aa20.61■□□□□ 0.89
PSMC3-204ENST00000527906 NCAPD3P42695 1498 aa20.57■□□□□ 0.88
PSMC3-204ENST00000527906 NESP48681 1621 aa20.48■□□□□ 0.87
PSMC3-204ENST00000527906 ATAD2BQ9ULI0 1458 aa20.42■□□□□ 0.86
PSMC3-204ENST00000527906 THOC2Q8NI27 1593 aaKnown RBP20.39■□□□□ 0.85
PSMC3-204ENST00000527906 HMGXB3Q12766 1538 aa20.34■□□□□ 0.85
PSMC3-204ENST00000527906 SMARCA2P51531 1590 aa20.29■□□□□ 0.84
PSMC3-204ENST00000527906 LAMC3Q9Y6N6 1575 aa20.19■□□□□ 0.82
PSMC3-204ENST00000527906 SMARCA4P51532 1647 aa20.18■□□□□ 0.82
PSMC3-204ENST00000527906 BAZ1BQ9UIG0 1483 aaKnown RBP20.18■□□□□ 0.82
PSMC3-204ENST00000527906 KIF21AQ7Z4S6 1674 aa20.13■□□□□ 0.81
PSMC3-204ENST00000527906 PDS5BQ9NTI5 1447 aa20.13■□□□□ 0.81
PSMC3-204ENST00000527906 MRC2Q9UBG0 1479 aa20■□□□□ 0.79
PSMC3-204ENST00000527906 PEG3Q9GZU2 1588 aa20■□□□□ 0.79
PSMC3-204ENST00000527906 BAZ1AQ9NRL2 1556 aaPredicted RBP20■□□□□ 0.79
PSMC3-204ENST00000527906 OSCARQ8IYS5 282 aa19.97■□□□□ 0.79
PSMC3-204ENST00000527906 WDR62O43379 1518 aa19.97■□□□□ 0.79
PSMC3-204ENST00000527906 CADPSQ9ULU8 1353 aa19.93■□□□□ 0.78
PSMC3-204ENST00000527906 MROH2BQ7Z745 1585 aa19.8■□□□□ 0.76
PSMC3-204ENST00000527906 CEP164Q9UPV0 1460 aa19.77■□□□□ 0.76
PSMC3-204ENST00000527906 RIMBP3CA6NJZ7 1639 aa19.76■□□□□ 0.75
PSMC3-204ENST00000527906 RIMBP3BA6NNM3 1639 aa19.76■□□□□ 0.75
PSMC3-204ENST00000527906 RIMBP3Q9UFD9 1639 aa19.76■□□□□ 0.75
PSMC3-204ENST00000527906 RSF1Q96T23 1441 aaPredicted RBP19.7■□□□□ 0.74
PSMC3-204ENST00000527906 FANCD2Q9BXW9 1451 aa19.69■□□□□ 0.74
PSMC3-204ENST00000527906 ARHGEF11O15085 1522 aa19.65■□□□□ 0.74
PSMC3-204ENST00000527906 URB2Q14146 1524 aaKnown RBP19.57■□□□□ 0.72
PSMC3-204ENST00000527906 TRHP20396 242 aaPredicted RBP19.56■□□□□ 0.72
PSMC3-204ENST00000527906 CYB5RLQ6IPT4 315 aa19.56■□□□□ 0.72
PSMC3-204ENST00000527906 WIZO95785 1651 aa19.56■□□□□ 0.72
PSMC3-204ENST00000527906 CFTRP13569 1480 aa19.54■□□□□ 0.72
PSMC3-204ENST00000527906 AEBP2Q6ZN18 517 aaPredicted RBP19.52■□□□□ 0.72
PSMC3-204ENST00000527906 ZNF608Q9ULD9 1512 aaPredicted RBP19.46■□□□□ 0.71
PSMC3-204ENST00000527906 TOP2AP11388 1531 aaKnown RBP19.45■□□□□ 0.7
PSMC3-204ENST00000527906 ARAP1Q96P48 1450 aa19.41■□□□□ 0.7
PSMC3-204ENST00000527906 IFT140Q96RY7 1462 aa19.41■□□□□ 0.7
PSMC3-204ENST00000527906 SUPT5HO00267 1087 aaKnown RBP19.39■□□□□ 0.69
PSMC3-204ENST00000527906 EIF4G3O43432 1585 aaKnown RBP19.28■□□□□ 0.68
PSMC3-204ENST00000527906 CHD1O14646 1710 aa19.24■□□□□ 0.67
PSMC3-204ENST00000527906 TOPBP1Q92547 1522 aa19.24■□□□□ 0.67
PSMC3-204ENST00000527906 FBLN2P98095 1184 aa19.22■□□□□ 0.67
PSMC3-204ENST00000527906 AQRO60306 1485 aaKnown RBP eCLIP19.2■□□□□ 0.664e-7■■■■□ 20.2
PSMC3-204ENST00000527906 PRDM2Q13029 1718 aa19.18■□□□□ 0.66
PSMC3-204ENST00000527906 CCDC88BA6NC98 1476 aa19.16■□□□□ 0.66
PSMC3-204ENST00000527906 ABCC8Q09428 1581 aa19.12■□□□□ 0.65
PSMC3-204ENST00000527906 TARBP1Q13395 1621 aaKnown RBP19.09■□□□□ 0.65
PSMC3-204ENST00000527906 DNMBPQ6XZF7 1577 aa19.09■□□□□ 0.65
PSMC3-204ENST00000527906 CLASP1Q7Z460 1538 aa19.05■□□□□ 0.64
PSMC3-204ENST00000527906 POLA1P09884 1462 aaPredicted RBP19■□□□□ 0.63
PSMC3-204ENST00000527906 SNAPC4Q5SXM2 1469 aa18.97■□□□□ 0.63
PSMC3-204ENST00000527906 TDRD9Q8NDG6 1382 aaKnown RBP18.97■□□□□ 0.63
PSMC3-204ENST00000527906 SYNJ1O43426 1573 aa18.96■□□□□ 0.63
PSMC3-204ENST00000527906 CHMP7Q8WUX9 453 aaPredicted RBP18.95■□□□□ 0.62
PSMC3-204ENST00000527906 RAD54L2Q9Y4B4 1467 aa18.95■□□□□ 0.62
PSMC3-204ENST00000527906 GAPVD1Q14C86 1478 aa18.92■□□□□ 0.62
PSMC3-204ENST00000527906 SOGA1O94964 1423 aa18.9■□□□□ 0.62
PSMC3-204ENST00000527906 MAGI1Q96QZ7 1491 aaPredicted RBP18.88■□□□□ 0.61
PSMC3-204ENST00000527906 WDR97A6NE52 1622 aa18.84■□□□□ 0.61
PSMC3-204ENST00000527906 SYNJ2O15056 1496 aa18.84■□□□□ 0.61
PSMC3-204ENST00000527906 GRIN2BQ13224 1484 aa18.82■□□□□ 0.6
PSMC3-204ENST00000527906 ILDR1Q86SU0 546 aaPredicted RBP18.79■□□□□ 0.6
PSMC3-204ENST00000527906 FGD5Q6ZNL6 1462 aa18.77■□□□□ 0.6
PSMC3-204ENST00000527906 ERCC6L2Q5T890 1561 aa18.71■□□□□ 0.59
PSMC3-204ENST00000527906 CUX1P39880 1505 aa18.64■□□□□ 0.57
PSMC3-204ENST00000527906 PBRM1Q86U86 1689 aa18.63■□□□□ 0.57
PSMC3-204ENST00000527906 KIF13AQ9H1H9 1805 aa18.62■□□□□ 0.57
PSMC3-204ENST00000527906 KDM4FA0A1W2PPD8 638 aa18.61■□□□□ 0.57
PSMC3-204ENST00000527906 CEP170Q5SW79 1584 aa18.6■□□□□ 0.57
PSMC3-204ENST00000527906 WRNQ14191 1432 aaPredicted RBP eCLIP18.57■□□□□ 0.56
PSMC3-204ENST00000527906 GRIN2AQ12879 1464 aa18.57■□□□□ 0.56
PSMC3-204ENST00000527906 NUP160Q12769 1436 aa18.55■□□□□ 0.56
PSMC3-204ENST00000527906 FAM69CQ0P6D2 419 aa18.54■□□□□ 0.56
PSMC3-204ENST00000527906 ABCA5Q8WWZ7 1642 aa18.53■□□□□ 0.56
PSMC3-204ENST00000527906 BIVM-ERCC5R4GMW8 1640 aa18.53■□□□□ 0.56
PSMC3-204ENST00000527906 TOP2BQ02880 1626 aa18.52■□□□□ 0.56
PSMC3-204ENST00000527906 ABCA10Q8WWZ4 1543 aa18.52■□□□□ 0.56
PSMC3-204ENST00000527906 SHROOM2Q13796 1616 aa18.5■□□□□ 0.55
PSMC3-204ENST00000527906 ABCC10Q5T3U5 1492 aa18.5■□□□□ 0.55
PSMC3-204ENST00000527906 ADAMTS12P58397 1594 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms