RNA–Protein interactions for RNA: ENST00000527891.5

ATM-213, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-213ENST00000527891 NISCHQ9Y2I1 1504 aa43.18■■■■■ 4.5
ATM-213ENST00000527891 CCDC180Q9P1Z9 1646 aa38.74■■■■□ 3.79
ATM-213ENST00000527891 ABCC9O60706 1549 aa38.73■■■■□ 3.79
ATM-213ENST00000527891 RB1CC1Q8TDY2 1594 aa36.89■■■■□ 3.5
ATM-213ENST00000527891 NACADO15069 1562 aa36.64■■■■□ 3.46
ATM-213ENST00000527891 DCAF8L2P0C7V8 631 aa36.42■■■■□ 3.42
ATM-213ENST00000527891 DNAJC5BQ9UF47 199 aa36.31■■■■□ 3.4
ATM-213ENST00000527891 MYO15BQ96JP2 1530 aa36.16■■■■□ 3.38
ATM-213ENST00000527891 PABPN1Q86U42 306 aaKnown RBP eCLIP36.06■■■■□ 3.36
ATM-213ENST00000527891 UNC13AQ9UPW8 1703 aa36■■■■□ 3.35
ATM-213ENST00000527891 ZCCHC6Q5VYS8 1495 aaKnown RBP35.81■■■■□ 3.32
ATM-213ENST00000527891 BICRAQ9NZM4 1560 aa35.8■■■■□ 3.32
ATM-213ENST00000527891 DCAF1Q9Y4B6 1507 aa35.69■■■■□ 3.3
ATM-213ENST00000527891 SHROOM4Q9ULL8 1493 aa35.37■■■■□ 3.25
ATM-213ENST00000527891 SCRIBQ14160 1630 aa35.3■■■■□ 3.24
ATM-213ENST00000527891 CC2D2AQ9P2K1 1620 aa34.99■■■■□ 3.19
ATM-213ENST00000527891 EIF4G1Q04637 1599 aaKnown RBP34.94■■■■□ 3.18
ATM-213ENST00000527891 CECR2Q9BXF3 1484 aa34.91■■■■□ 3.18
ATM-213ENST00000527891 NCAPD3P42695 1498 aa33.83■■■■□ 3.01
ATM-213ENST00000527891 ATAD2BQ9ULI0 1458 aa33.72■■■□□ 2.99
ATM-213ENST00000527891 SMARCA4P51532 1647 aa33.68■■■□□ 2.98
ATM-213ENST00000527891 SMARCA2P51531 1590 aa33.64■■■□□ 2.98
ATM-213ENST00000527891 HMGXB3Q12766 1538 aa33.58■■■□□ 2.97
ATM-213ENST00000527891 BAZ1AQ9NRL2 1556 aaPredicted RBP33.53■■■□□ 2.96
ATM-213ENST00000527891 ERCC6Q03468 1493 aa33.47■■■□□ 2.95
ATM-213ENST00000527891 CUX2O14529 1486 aa33.42■■■□□ 2.94
ATM-213ENST00000527891 BAZ1BQ9UIG0 1483 aaKnown RBP33.4■■■□□ 2.94
ATM-213ENST00000527891 PEG3Q9GZU2 1588 aa33.37■■■□□ 2.93
ATM-213ENST00000527891 DNAJC5Q9H3Z4 198 aa33.36■■■□□ 2.93
ATM-213ENST00000527891 NESP48681 1621 aa33.27■■■□□ 2.92
ATM-213ENST00000527891 MROH2BQ7Z745 1585 aa33.26■■■□□ 2.92
ATM-213ENST00000527891 LAMC3Q9Y6N6 1575 aa33.07■■■□□ 2.88
ATM-213ENST00000527891 THOC2Q8NI27 1593 aaKnown RBP32.96■■■□□ 2.87
ATM-213ENST00000527891 PDS5BQ9NTI5 1447 aa32.89■■■□□ 2.86
ATM-213ENST00000527891 WIZO95785 1651 aa32.85■■■□□ 2.85
ATM-213ENST00000527891 KIF21AQ7Z4S6 1674 aa32.83■■■□□ 2.85
ATM-213ENST00000527891 CADPSQ9ULU8 1353 aa32.8■■■□□ 2.84
ATM-213ENST00000527891 MRC2Q9UBG0 1479 aa32.6■■■□□ 2.81
ATM-213ENST00000527891 RSF1Q96T23 1441 aaPredicted RBP32.59■■■□□ 2.81
ATM-213ENST00000527891 WDR62O43379 1518 aa32.51■■■□□ 2.8
ATM-213ENST00000527891 CEP164Q9UPV0 1460 aa32.48■■■□□ 2.79
ATM-213ENST00000527891 TOP2AP11388 1531 aaKnown RBP32.47■■■□□ 2.79
ATM-213ENST00000527891 CFTRP13569 1480 aa32.43■■■□□ 2.78
ATM-213ENST00000527891 FANCD2Q9BXW9 1451 aa32.43■■■□□ 2.78
ATM-213ENST00000527891 URB2Q14146 1524 aaKnown RBP32.16■■■□□ 2.74
ATM-213ENST00000527891 CCDC88BA6NC98 1476 aa32.09■■■□□ 2.73
ATM-213ENST00000527891 PRDM2Q13029 1718 aa32.06■■■□□ 2.72
ATM-213ENST00000527891 TRIM41Q8WV44 630 aa31.9■■■□□ 2.7
ATM-213ENST00000527891 OSCARQ8IYS5 282 aa31.87■■■□□ 2.69
ATM-213ENST00000527891 IFT140Q96RY7 1462 aa31.83■■■□□ 2.69
ATM-213ENST00000527891 TOPBP1Q92547 1522 aa31.81■■■□□ 2.68
ATM-213ENST00000527891 ABCC8Q09428 1581 aa31.76■■■□□ 2.67
ATM-213ENST00000527891 ZNF608Q9ULD9 1512 aaPredicted RBP31.75■■■□□ 2.67
ATM-213ENST00000527891 DNMBPQ6XZF7 1577 aa31.7■■■□□ 2.67
ATM-213ENST00000527891 EIF4G3O43432 1585 aaKnown RBP31.59■■■□□ 2.65
ATM-213ENST00000527891 TARBP1Q13395 1621 aaKnown RBP31.52■■■□□ 2.64
ATM-213ENST00000527891 POLA1P09884 1462 aaPredicted RBP31.49■■■□□ 2.63
ATM-213ENST00000527891 AQRO60306 1485 aaKnown RBP eCLIP31.46■■■□□ 2.63
ATM-213ENST00000527891 RIMBP3CA6NJZ7 1639 aa31.45■■■□□ 2.62
ATM-213ENST00000527891 RIMBP3BA6NNM3 1639 aa31.45■■■□□ 2.62
ATM-213ENST00000527891 RIMBP3Q9UFD9 1639 aa31.45■■■□□ 2.62
ATM-213ENST00000527891 ARHGEF11O15085 1522 aa31.36■■■□□ 2.61
ATM-213ENST00000527891 RAD54L2Q9Y4B4 1467 aa31.36■■■□□ 2.61
ATM-213ENST00000527891 SOGA1O94964 1423 aa31.34■■■□□ 2.61
ATM-213ENST00000527891 CHD1O14646 1710 aa31.32■■■□□ 2.6
ATM-213ENST00000527891 FGD5Q6ZNL6 1462 aa31.29■■■□□ 2.6
ATM-213ENST00000527891 TDRD9Q8NDG6 1382 aaKnown RBP31.27■■■□□ 2.6
ATM-213ENST00000527891 CUX1P39880 1505 aa31.26■■■□□ 2.59
ATM-213ENST00000527891 FBLN2P98095 1184 aa31.26■■■□□ 2.59
ATM-213ENST00000527891 WDR97A6NE52 1622 aa31.24■■■□□ 2.59
ATM-213ENST00000527891 SNAPC4Q5SXM2 1469 aa31.16■■■□□ 2.58
ATM-213ENST00000527891 SUPT5HO00267 1087 aaKnown RBP31.13■■■□□ 2.57
ATM-213ENST00000527891 CYB5RLQ6IPT4 315 aa31.12■■■□□ 2.57
ATM-213ENST00000527891 MAGI1Q96QZ7 1491 aaPredicted RBP31.09■■■□□ 2.57
ATM-213ENST00000527891 GRIN2BQ13224 1484 aa31.08■■■□□ 2.57
ATM-213ENST00000527891 ARAP1Q96P48 1450 aa31.06■■■□□ 2.56
ATM-213ENST00000527891 CHMP7Q8WUX9 453 aaPredicted RBP31.04■■■□□ 2.56
ATM-213ENST00000527891 CLASP1Q7Z460 1538 aa30.99■■■□□ 2.55
ATM-213ENST00000527891 SYNJ1O43426 1573 aa30.99■■■□□ 2.55
ATM-213ENST00000527891 SYNJ2O15056 1496 aa30.98■■■□□ 2.55
ATM-213ENST00000527891 GAPVD1Q14C86 1478 aa30.96■■■□□ 2.55
ATM-213ENST00000527891 ABCA10Q8WWZ4 1543 aa30.94■■■□□ 2.54
ATM-213ENST00000527891 PBRM1Q86U86 1689 aa30.93■■■□□ 2.54
ATM-213ENST00000527891 ABCA5Q8WWZ7 1642 aa30.89■■■□□ 2.54
ATM-213ENST00000527891 WRNQ14191 1432 aaPredicted RBP eCLIP30.82■■■□□ 2.52
ATM-213ENST00000527891 TRHP20396 242 aaPredicted RBP30.78■■■□□ 2.52
ATM-213ENST00000527891 TOP2BQ02880 1626 aa30.76■■■□□ 2.52
ATM-213ENST00000527891 BIVM-ERCC5R4GMW8 1640 aa30.76■■■□□ 2.51
ATM-213ENST00000527891 GRIN2AQ12879 1464 aa30.69■■■□□ 2.5
ATM-213ENST00000527891 ADAMTS12P58397 1594 aa30.66■■■□□ 2.5
ATM-213ENST00000527891 FHAD1B1AJZ9 1412 aa30.58■■■□□ 2.49
ATM-213ENST00000527891 NUP160Q12769 1436 aa30.58■■■□□ 2.49
ATM-213ENST00000527891 CEP170Q5SW79 1584 aa30.56■■■□□ 2.48
ATM-213ENST00000527891 ERICH3Q5RHP9 1530 aa30.56■■■□□ 2.48
ATM-213ENST00000527891 ERCC6L2Q5T890 1561 aa30.49■■■□□ 2.47
ATM-213ENST00000527891 SHROOM2Q13796 1616 aa30.43■■■□□ 2.46
ATM-213ENST00000527891 PRG4Q92954 1404 aaPredicted RBP30.28■■■□□ 2.44
ATM-213ENST00000527891 JPH4Q96JJ6 628 aa30.25■■■□□ 2.43
ATM-213ENST00000527891 RUSC2Q8N2Y8 1516 aa30.23■■■□□ 2.43
ATM-213ENST00000527891 KIF27Q86VH2 1401 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms