RNA–Protein interactions for RNA: ENST00000527656.1

LRP4-202, Transcript of LDL receptor related protein 4, humanhuman

TSL 2

Gene LRP4, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4-202ENST00000527656 NISCHQ9Y2I1 1504 aa38.77■■■■□ 3.8
LRP4-202ENST00000527656 CCDC180Q9P1Z9 1646 aa34.7■■■■□ 3.14
LRP4-202ENST00000527656 ABCC9O60706 1549 aa34.17■■■■□ 3.06
LRP4-202ENST00000527656 RB1CC1Q8TDY2 1594 aa32.7■■■□□ 2.83
LRP4-202ENST00000527656 NACADO15069 1562 aa32.58■■■□□ 2.81
LRP4-202ENST00000527656 DCAF8L2P0C7V8 631 aa32.29■■■□□ 2.76
LRP4-202ENST00000527656 ZCCHC6Q5VYS8 1495 aaKnown RBP32.28■■■□□ 2.76
LRP4-202ENST00000527656 MYO15BQ96JP2 1530 aa32.27■■■□□ 2.76
LRP4-202ENST00000527656 UNC13AQ9UPW8 1703 aa32.26■■■□□ 2.76
LRP4-202ENST00000527656 DCAF1Q9Y4B6 1507 aa32.04■■■□□ 2.72
LRP4-202ENST00000527656 BICRAQ9NZM4 1560 aa31.88■■■□□ 2.69
LRP4-202ENST00000527656 PABPN1Q86U42 306 aaKnown RBP eCLIP31.8■■■□□ 2.68
LRP4-202ENST00000527656 DNAJC5BQ9UF47 199 aa31.66■■■□□ 2.66
LRP4-202ENST00000527656 SCRIBQ14160 1630 aa31.64■■■□□ 2.65
LRP4-202ENST00000527656 SHROOM4Q9ULL8 1493 aa31.33■■■□□ 2.61
LRP4-202ENST00000527656 EIF4G1Q04637 1599 aaKnown RBP31■■■□□ 2.55
LRP4-202ENST00000527656 CC2D2AQ9P2K1 1620 aa30.97■■■□□ 2.55
LRP4-202ENST00000527656 CECR2Q9BXF3 1484 aa30.7■■■□□ 2.51
LRP4-202ENST00000527656 SMARCA4P51532 1647 aa30.22■■■□□ 2.43
LRP4-202ENST00000527656 ATAD2BQ9ULI0 1458 aa30.06■■■□□ 2.4
LRP4-202ENST00000527656 BAZ1AQ9NRL2 1556 aaPredicted RBP30.04■■■□□ 2.4
LRP4-202ENST00000527656 NCAPD3P42695 1498 aa30.04■■■□□ 2.4
LRP4-202ENST00000527656 SMARCA2P51531 1590 aa29.97■■■□□ 2.39
LRP4-202ENST00000527656 HMGXB3Q12766 1538 aa29.94■■■□□ 2.38
LRP4-202ENST00000527656 MROH2BQ7Z745 1585 aa29.93■■■□□ 2.38
LRP4-202ENST00000527656 PEG3Q9GZU2 1588 aa29.91■■■□□ 2.38
LRP4-202ENST00000527656 BAZ1BQ9UIG0 1483 aaKnown RBP29.76■■■□□ 2.35
LRP4-202ENST00000527656 WIZO95785 1651 aa29.65■■■□□ 2.34
LRP4-202ENST00000527656 NESP48681 1621 aa29.54■■■□□ 2.32
LRP4-202ENST00000527656 RSF1Q96T23 1441 aaPredicted RBP29.39■■■□□ 2.3
LRP4-202ENST00000527656 ERCC6Q03468 1493 aa29.38■■■□□ 2.29
LRP4-202ENST00000527656 LAMC3Q9Y6N6 1575 aa29.35■■■□□ 2.29
LRP4-202ENST00000527656 KIF21AQ7Z4S6 1674 aa29.28■■■□□ 2.28
LRP4-202ENST00000527656 THOC2Q8NI27 1593 aaKnown RBP29.23■■■□□ 2.27
LRP4-202ENST00000527656 TOP2AP11388 1531 aaKnown RBP29.23■■■□□ 2.27
LRP4-202ENST00000527656 CUX2O14529 1486 aa29.22■■■□□ 2.27
LRP4-202ENST00000527656 CADPSQ9ULU8 1353 aa29.11■■■□□ 2.25
LRP4-202ENST00000527656 PDS5BQ9NTI5 1447 aa29.03■■■□□ 2.24
LRP4-202ENST00000527656 CFTRP13569 1480 aa28.93■■■□□ 2.22
LRP4-202ENST00000527656 PRDM2Q13029 1718 aa28.91■■■□□ 2.22
LRP4-202ENST00000527656 MRC2Q9UBG0 1479 aa28.86■■■□□ 2.21
LRP4-202ENST00000527656 WDR62O43379 1518 aa28.85■■■□□ 2.21
LRP4-202ENST00000527656 CCDC88BA6NC98 1476 aa28.85■■■□□ 2.21
LRP4-202ENST00000527656 FANCD2Q9BXW9 1451 aa28.84■■■□□ 2.21
LRP4-202ENST00000527656 CEP164Q9UPV0 1460 aa28.82■■■□□ 2.2
LRP4-202ENST00000527656 URB2Q14146 1524 aaKnown RBP28.64■■■□□ 2.18
LRP4-202ENST00000527656 DNAJC5Q9H3Z4 198 aa28.62■■■□□ 2.17
LRP4-202ENST00000527656 TOPBP1Q92547 1522 aa28.38■■■□□ 2.13
LRP4-202ENST00000527656 DNMBPQ6XZF7 1577 aa28.33■■■□□ 2.13
LRP4-202ENST00000527656 SUPT5HO00267 1087 aaKnown RBP28.27■■■□□ 2.12
LRP4-202ENST00000527656 ZNF608Q9ULD9 1512 aaPredicted RBP28.23■■■□□ 2.11
LRP4-202ENST00000527656 ABCC8Q09428 1581 aa28.21■■■□□ 2.11
LRP4-202ENST00000527656 IFT140Q96RY7 1462 aa28.21■■■□□ 2.11
LRP4-202ENST00000527656 TARBP1Q13395 1621 aaKnown RBP28.18■■■□□ 2.1
LRP4-202ENST00000527656 EIF4G3O43432 1585 aaKnown RBP28.15■■■□□ 2.1
LRP4-202ENST00000527656 POLA1P09884 1462 aaPredicted RBP28.13■■■□□ 2.09
LRP4-202ENST00000527656 CUX1P39880 1505 aa28.1■■■□□ 2.09
LRP4-202ENST00000527656 FGD5Q6ZNL6 1462 aa28.01■■■□□ 2.07
LRP4-202ENST00000527656 RAD54L2Q9Y4B4 1467 aa28.01■■■□□ 2.07
LRP4-202ENST00000527656 WDR97A6NE52 1622 aa27.96■■■□□ 2.07
LRP4-202ENST00000527656 AQRO60306 1485 aaKnown RBP eCLIP27.95■■■□□ 2.06
LRP4-202ENST00000527656 CHD1O14646 1710 aa27.92■■■□□ 2.06
LRP4-202ENST00000527656 SOGA1O94964 1423 aa27.88■■■□□ 2.05
LRP4-202ENST00000527656 OSCARQ8IYS5 282 aa27.81■■■□□ 2.04
LRP4-202ENST00000527656 BIVM-ERCC5R4GMW8 1640 aa27.81■■■□□ 2.04
LRP4-202ENST00000527656 TDRD9Q8NDG6 1382 aaKnown RBP27.8■■■□□ 2.04
LRP4-202ENST00000527656 SYNJ1O43426 1573 aa27.8■■■□□ 2.04
LRP4-202ENST00000527656 PBRM1Q86U86 1689 aa27.77■■■□□ 2.04
LRP4-202ENST00000527656 TOP2BQ02880 1626 aa27.76■■■□□ 2.03
LRP4-202ENST00000527656 ABCA5Q8WWZ7 1642 aa27.73■■■□□ 2.03
LRP4-202ENST00000527656 SNAPC4Q5SXM2 1469 aa27.71■■■□□ 2.03
LRP4-202ENST00000527656 ABCA10Q8WWZ4 1543 aa27.7■■■□□ 2.02
LRP4-202ENST00000527656 WRNQ14191 1432 aaPredicted RBP eCLIP27.68■■■□□ 2.02
LRP4-202ENST00000527656 RIMBP3CA6NJZ7 1639 aa27.68■■■□□ 2.02
LRP4-202ENST00000527656 RIMBP3BA6NNM3 1639 aa27.68■■■□□ 2.02
LRP4-202ENST00000527656 RIMBP3Q9UFD9 1639 aa27.68■■■□□ 2.02
LRP4-202ENST00000527656 GRIN2BQ13224 1484 aa27.63■■■□□ 2.01
LRP4-202ENST00000527656 GAPVD1Q14C86 1478 aa27.61■■■□□ 2.01
LRP4-202ENST00000527656 MAGI1Q96QZ7 1491 aaPredicted RBP27.61■■■□□ 2.01
LRP4-202ENST00000527656 ARHGEF11O15085 1522 aa27.58■■■□□ 2.01
LRP4-202ENST00000527656 TRIM41Q8WV44 630 aa27.54■■■□□ 2
LRP4-202ENST00000527656 CLASP1Q7Z460 1538 aa27.52■■■□□ 2
LRP4-202ENST00000527656 SYNJ2O15056 1496 aa27.51■■■□□ 2
LRP4-202ENST00000527656 FBLN2P98095 1184 aa27.51■■□□□ 1.99
LRP4-202ENST00000527656 ADAMTS12P58397 1594 aa27.48■■□□□ 1.99
LRP4-202ENST00000527656 CHMP7Q8WUX9 453 aaPredicted RBP27.38■■□□□ 1.97
LRP4-202ENST00000527656 ARAP1Q96P48 1450 aa27.36■■□□□ 1.97
LRP4-202ENST00000527656 ERICH3Q5RHP9 1530 aa27.35■■□□□ 1.97
LRP4-202ENST00000527656 GRIN2AQ12879 1464 aa27.33■■□□□ 1.97
LRP4-202ENST00000527656 CEP170Q5SW79 1584 aa27.31■■□□□ 1.96
LRP4-202ENST00000527656 FHAD1B1AJZ9 1412 aa27.24■■□□□ 1.95
LRP4-202ENST00000527656 NUP160Q12769 1436 aa27.23■■□□□ 1.95
LRP4-202ENST00000527656 ERCC6L2Q5T890 1561 aa27.18■■□□□ 1.94
LRP4-202ENST00000527656 CYB5RLQ6IPT4 315 aa27.17■■□□□ 1.94
LRP4-202ENST00000527656 SHROOM2Q13796 1616 aa27.16■■□□□ 1.94
LRP4-202ENST00000527656 CUL7Q14999 1698 aa27.09■■□□□ 1.93
LRP4-202ENST00000527656 RUSC2Q8N2Y8 1516 aa27.09■■□□□ 1.93
LRP4-202ENST00000527656 KIF27Q86VH2 1401 aa27.07■■□□□ 1.92
LRP4-202ENST00000527656 IGF1RP08069 1367 aa27.03■■□□□ 1.92
LRP4-202ENST00000527656 PRG4Q92954 1404 aaPredicted RBP26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms