RNA–Protein interactions for RNA: ENST00000527649.1

SORL1-205, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 1,765 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-205ENST00000527649 NISCHQ9Y2I1 1504 aa31.59■■■□□ 2.65
SORL1-205ENST00000527649 CCDC180Q9P1Z9 1646 aa27.7■■■□□ 2.02
SORL1-205ENST00000527649 ABCC9O60706 1549 aa26.58■■□□□ 1.85
SORL1-205ENST00000527649 ZCCHC6Q5VYS8 1495 aaKnown RBP26.46■■□□□ 1.83
SORL1-205ENST00000527649 DCAF8L2P0C7V8 631 aa26.22■■□□□ 1.79
SORL1-205ENST00000527649 DCAF1Q9Y4B6 1507 aa26.09■■□□□ 1.77
SORL1-205ENST00000527649 MYO15BQ96JP2 1530 aa25.92■■□□□ 1.74
SORL1-205ENST00000527649 NACADO15069 1562 aa25.89■■□□□ 1.73
SORL1-205ENST00000527649 RB1CC1Q8TDY2 1594 aa25.75■■□□□ 1.71
SORL1-205ENST00000527649 SHROOM4Q9ULL8 1493 aa25.53■■□□□ 1.68
SORL1-205ENST00000527649 SCRIBQ14160 1630 aa25.46■■□□□ 1.67
SORL1-205ENST00000527649 UNC13AQ9UPW8 1703 aa25.26■■□□□ 1.63
SORL1-205ENST00000527649 BICRAQ9NZM4 1560 aa25.03■■□□□ 1.6
SORL1-205ENST00000527649 PABPN1Q86U42 306 aaKnown RBP eCLIP25■■□□□ 1.591e-7■□□□□ 8.9
SORL1-205ENST00000527649 CECR2Q9BXF3 1484 aa24.61■■□□□ 1.53
SORL1-205ENST00000527649 MROH2BQ7Z745 1585 aa24.41■■□□□ 1.5
SORL1-205ENST00000527649 BAZ1AQ9NRL2 1556 aaPredicted RBP24.4■■□□□ 1.5
SORL1-205ENST00000527649 RSF1Q96T23 1441 aaPredicted RBP24.37■■□□□ 1.49
SORL1-205ENST00000527649 SMARCA4P51532 1647 aa24.36■■□□□ 1.49
SORL1-205ENST00000527649 SUPT5HO00267 1087 aaKnown RBP24.36■■□□□ 1.49
SORL1-205ENST00000527649 EIF4G1Q04637 1599 aaKnown RBP24.29■■□□□ 1.48
SORL1-205ENST00000527649 WIZO95785 1651 aa24.18■■□□□ 1.46
SORL1-205ENST00000527649 PEG3Q9GZU2 1588 aa24.07■■□□□ 1.44
SORL1-205ENST00000527649 ATAD2BQ9ULI0 1458 aa24.07■■□□□ 1.44
SORL1-205ENST00000527649 CC2D2AQ9P2K1 1620 aa24.03■■□□□ 1.44
SORL1-205ENST00000527649 SMARCA2P51531 1590 aa24.02■■□□□ 1.44
SORL1-205ENST00000527649 NCAPD3P42695 1498 aa23.91■■□□□ 1.42
SORL1-205ENST00000527649 TOP2AP11388 1531 aaKnown RBP23.91■■□□□ 1.42
SORL1-205ENST00000527649 BAZ1BQ9UIG0 1483 aaKnown RBP23.9■■□□□ 1.42
SORL1-205ENST00000527649 HMGXB3Q12766 1538 aa23.84■■□□□ 1.41
SORL1-205ENST00000527649 DNAJC5BQ9UF47 199 aa23.83■■□□□ 1.4
SORL1-205ENST00000527649 CCDC88BA6NC98 1476 aa23.67■■□□□ 1.38
SORL1-205ENST00000527649 CFTRP13569 1480 aa23.28■■□□□ 1.32
SORL1-205ENST00000527649 CADPSQ9ULU8 1353 aa23.27■■□□□ 1.32
SORL1-205ENST00000527649 NESP48681 1621 aa23.23■■□□□ 1.31
SORL1-205ENST00000527649 LAMC3Q9Y6N6 1575 aa23.14■■□□□ 1.3
SORL1-205ENST00000527649 PRDM2Q13029 1718 aa23.11■■□□□ 1.29
SORL1-205ENST00000527649 CHIC1Q5VXU3 224 aa23.11■■□□□ 1.29
SORL1-205ENST00000527649 ABCC8Q09428 1581 aa23.07■■□□□ 1.28
SORL1-205ENST00000527649 FANCD2Q9BXW9 1451 aa23.02■■□□□ 1.28
SORL1-205ENST00000527649 PDS5BQ9NTI5 1447 aa22.98■■□□□ 1.27
SORL1-205ENST00000527649 WRNQ14191 1432 aaPredicted RBP eCLIP22.93■■□□□ 1.26
SORL1-205ENST00000527649 KIF21AQ7Z4S6 1674 aa22.93■■□□□ 1.26
SORL1-205ENST00000527649 CEP164Q9UPV0 1460 aa22.91■■□□□ 1.26
SORL1-205ENST00000527649 TRIM41Q8WV44 630 aa22.9■■□□□ 1.26
SORL1-205ENST00000527649 SYNJ1O43426 1573 aa22.88■■□□□ 1.25
SORL1-205ENST00000527649 CUX1P39880 1505 aa22.85■■□□□ 1.25
SORL1-205ENST00000527649 ERCC6Q03468 1493 aa22.81■■□□□ 1.24
SORL1-205ENST00000527649 TOP2BQ02880 1626 aa22.79■■□□□ 1.24
SORL1-205ENST00000527649 URB2Q14146 1524 aaKnown RBP22.77■■□□□ 1.24
SORL1-205ENST00000527649 BIVM-ERCC5R4GMW8 1640 aa22.76■■□□□ 1.23
SORL1-205ENST00000527649 DNMBPQ6XZF7 1577 aa22.74■■□□□ 1.23
SORL1-205ENST00000527649 TOPBP1Q92547 1522 aa22.73■■□□□ 1.23
SORL1-205ENST00000527649 MRC2Q9UBG0 1479 aa22.72■■□□□ 1.23
SORL1-205ENST00000527649 THOC2Q8NI27 1593 aaKnown RBP22.65■■□□□ 1.22
SORL1-205ENST00000527649 FGD5Q6ZNL6 1462 aa22.65■■□□□ 1.22
SORL1-205ENST00000527649 WDR62O43379 1518 aa22.62■■□□□ 1.21
SORL1-205ENST00000527649 POLA1P09884 1462 aaPredicted RBP22.6■■□□□ 1.21
SORL1-205ENST00000527649 SOGA1O94964 1423 aa22.56■■□□□ 1.2
SORL1-205ENST00000527649 RAD54L2Q9Y4B4 1467 aa22.54■■□□□ 1.2
SORL1-205ENST00000527649 FAM9AQ8IZU1 332 aaPredicted RBP22.5■■□□□ 1.19
SORL1-205ENST00000527649 RUSC2Q8N2Y8 1516 aa22.5■■□□□ 1.19
SORL1-205ENST00000527649 CUX2O14529 1486 aa22.48■■□□□ 1.19
SORL1-205ENST00000527649 TARBP1Q13395 1621 aaKnown RBP22.43■■□□□ 1.18
SORL1-205ENST00000527649 ABCA10Q8WWZ4 1543 aa22.43■■□□□ 1.18
SORL1-205ENST00000527649 WDR97A6NE52 1622 aa22.4■■□□□ 1.18
SORL1-205ENST00000527649 IFT140Q96RY7 1462 aa22.38■■□□□ 1.17
SORL1-205ENST00000527649 KIF27Q86VH2 1401 aa22.37■■□□□ 1.17
SORL1-205ENST00000527649 EEA1Q15075 1411 aa22.35■■□□□ 1.17
SORL1-205ENST00000527649 TDRD9Q8NDG6 1382 aaKnown RBP22.35■■□□□ 1.17
SORL1-205ENST00000527649 ZNF608Q9ULD9 1512 aaPredicted RBP22.31■■□□□ 1.16
SORL1-205ENST00000527649 CSRNP3Q8WYN3 585 aa22.3■■□□□ 1.16
SORL1-205ENST00000527649 ABCA5Q8WWZ7 1642 aa22.28■■□□□ 1.16
SORL1-205ENST00000527649 AQRO60306 1485 aaKnown RBP eCLIP22.28■■□□□ 1.164e-9■■■■□ 20.7
SORL1-205ENST00000527649 GAPVD1Q14C86 1478 aa22.25■■□□□ 1.15
SORL1-205ENST00000527649 IGF1RP08069 1367 aa22.24■■□□□ 1.15
SORL1-205ENST00000527649 LOC105371045A0A1W2PR82 267 aa22.23■■□□□ 1.15
SORL1-205ENST00000527649 EHMT2Q96KQ7 1210 aa22.22■■□□□ 1.15
SORL1-205ENST00000527649 EIF4G3O43432 1585 aaKnown RBP22.21■■□□□ 1.15
SORL1-205ENST00000527649 PBRM1Q86U86 1689 aa22.15■■□□□ 1.14
SORL1-205ENST00000527649 ERICH3Q5RHP9 1530 aa22.15■■□□□ 1.14
SORL1-205ENST00000527649 PRXQ9BXM0 1461 aa22.15■■□□□ 1.14
SORL1-205ENST00000527649 GRIN2BQ13224 1484 aa22.13■■□□□ 1.13
SORL1-205ENST00000527649 KIF21BO75037 1637 aa22.12■■□□□ 1.13
SORL1-205ENST00000527649 RAPGEF2Q9Y4G8 1499 aa22.11■■□□□ 1.13
SORL1-205ENST00000527649 CARMIL1Q5VZK9 1371 aa22.11■■□□□ 1.13
SORL1-205ENST00000527649 CUL7Q14999 1698 aa22.07■■□□□ 1.12
SORL1-205ENST00000527649 GOLGA3Q08378 1498 aa22.06■■□□□ 1.12
SORL1-205ENST00000527649 SNAPC4Q5SXM2 1469 aa22.05■■□□□ 1.12
SORL1-205ENST00000527649 ADAMTS12P58397 1594 aa22.02■■□□□ 1.12
SORL1-205ENST00000527649 FHAD1B1AJZ9 1412 aa21.99■■□□□ 1.11
SORL1-205ENST00000527649 UBTFP17480 764 aaKnown RBP21.99■■□□□ 1.11
SORL1-205ENST00000527649 MAGI1Q96QZ7 1491 aaPredicted RBP21.99■■□□□ 1.11
SORL1-205ENST00000527649 TNIKQ9UKE5 1360 aa21.91■■□□□ 1.1
SORL1-205ENST00000527649 SYNJ2O15056 1496 aa21.91■■□□□ 1.1
SORL1-205ENST00000527649 FBLN2P98095 1184 aa21.88■■□□□ 1.09
SORL1-205ENST00000527649 CHMP7Q8WUX9 453 aaPredicted RBP21.87■■□□□ 1.09
SORL1-205ENST00000527649 GRIN2AQ12879 1464 aa21.87■■□□□ 1.09
SORL1-205ENST00000527649 CEP162Q5TB80 1403 aa21.79■■□□□ 1.08
SORL1-205ENST00000527649 CHD1O14646 1710 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms