RNA–Protein interactions for RNA: ENST00000527563.1

RHOC-217, Transcript of ras homolog family member C, humanhuman

TSL 3

Gene RHOC, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOC-217ENST00000527563 NISCHQ9Y2I1 1504 aa42.66■■■■■ 4.42
RHOC-217ENST00000527563 CCDC180Q9P1Z9 1646 aa38.26■■■■□ 3.71
RHOC-217ENST00000527563 ABCC9O60706 1549 aa37.87■■■■□ 3.65
RHOC-217ENST00000527563 RB1CC1Q8TDY2 1594 aa36.2■■■■□ 3.39
RHOC-217ENST00000527563 NACADO15069 1562 aa36.02■■■■□ 3.36
RHOC-217ENST00000527563 DCAF8L2P0C7V8 631 aa35.75■■■■□ 3.31
RHOC-217ENST00000527563 MYO15BQ96JP2 1530 aa35.61■■■■□ 3.29
RHOC-217ENST00000527563 UNC13AQ9UPW8 1703 aa35.6■■■■□ 3.29
RHOC-217ENST00000527563 ZCCHC6Q5VYS8 1495 aaKnown RBP35.42■■■■□ 3.26
RHOC-217ENST00000527563 DCAF1Q9Y4B6 1507 aa35.27■■■■□ 3.24
RHOC-217ENST00000527563 DNAJC5BQ9UF47 199 aa35.25■■■■□ 3.23
RHOC-217ENST00000527563 PABPN1Q86U42 306 aaKnown RBP eCLIP35.23■■■■□ 3.23
RHOC-217ENST00000527563 BICRAQ9NZM4 1560 aa35.19■■■■□ 3.22
RHOC-217ENST00000527563 SCRIBQ14160 1630 aa34.83■■■■□ 3.17
RHOC-217ENST00000527563 SHROOM4Q9ULL8 1493 aa34.66■■■■□ 3.14
RHOC-217ENST00000527563 CC2D2AQ9P2K1 1620 aa34.29■■■■□ 3.08
RHOC-217ENST00000527563 EIF4G1Q04637 1599 aaKnown RBP34.26■■■■□ 3.07
RHOC-217ENST00000527563 CECR2Q9BXF3 1484 aa34.06■■■■□ 3.04
RHOC-217ENST00000527563 SMARCA4P51532 1647 aa33.27■■■□□ 2.92
RHOC-217ENST00000527563 NCAPD3P42695 1498 aa33.2■■■□□ 2.91
RHOC-217ENST00000527563 ATAD2BQ9ULI0 1458 aa33.16■■■□□ 2.9
RHOC-217ENST00000527563 SMARCA2P51531 1590 aa33.1■■■□□ 2.89
RHOC-217ENST00000527563 BAZ1AQ9NRL2 1556 aaPredicted RBP33.09■■■□□ 2.89
RHOC-217ENST00000527563 HMGXB3Q12766 1538 aa33.04■■■□□ 2.88
RHOC-217ENST00000527563 PEG3Q9GZU2 1588 aa32.94■■■□□ 2.86
RHOC-217ENST00000527563 MROH2BQ7Z745 1585 aa32.89■■■□□ 2.86
RHOC-217ENST00000527563 BAZ1BQ9UIG0 1483 aaKnown RBP32.85■■■□□ 2.85
RHOC-217ENST00000527563 NESP48681 1621 aa32.64■■■□□ 2.82
RHOC-217ENST00000527563 ERCC6Q03468 1493 aa32.64■■■□□ 2.82
RHOC-217ENST00000527563 WIZO95785 1651 aa32.57■■■□□ 2.8
RHOC-217ENST00000527563 CUX2O14529 1486 aa32.52■■■□□ 2.8
RHOC-217ENST00000527563 LAMC3Q9Y6N6 1575 aa32.47■■■□□ 2.79
RHOC-217ENST00000527563 KIF21AQ7Z4S6 1674 aa32.35■■■□□ 2.77
RHOC-217ENST00000527563 THOC2Q8NI27 1593 aaKnown RBP32.32■■■□□ 2.76
RHOC-217ENST00000527563 RSF1Q96T23 1441 aaPredicted RBP32.26■■■□□ 2.76
RHOC-217ENST00000527563 CADPSQ9ULU8 1353 aa32.19■■■□□ 2.74
RHOC-217ENST00000527563 PDS5BQ9NTI5 1447 aa32.18■■■□□ 2.74
RHOC-217ENST00000527563 TOP2AP11388 1531 aaKnown RBP32.12■■■□□ 2.73
RHOC-217ENST00000527563 DNAJC5Q9H3Z4 198 aa32.12■■■□□ 2.73
RHOC-217ENST00000527563 MRC2Q9UBG0 1479 aa31.93■■■□□ 2.7
RHOC-217ENST00000527563 CFTRP13569 1480 aa31.91■■■□□ 2.7
RHOC-217ENST00000527563 WDR62O43379 1518 aa31.88■■■□□ 2.69
RHOC-217ENST00000527563 CEP164Q9UPV0 1460 aa31.86■■■□□ 2.69
RHOC-217ENST00000527563 FANCD2Q9BXW9 1451 aa31.85■■■□□ 2.69
RHOC-217ENST00000527563 PRDM2Q13029 1718 aa31.85■■■□□ 2.69
RHOC-217ENST00000527563 CCDC88BA6NC98 1476 aa31.72■■■□□ 2.67
RHOC-217ENST00000527563 URB2Q14146 1524 aaKnown RBP31.6■■■□□ 2.65
RHOC-217ENST00000527563 TOPBP1Q92547 1522 aa31.31■■■□□ 2.6
RHOC-217ENST00000527563 DNMBPQ6XZF7 1577 aa31.24■■■□□ 2.59
RHOC-217ENST00000527563 ABCC8Q09428 1581 aa31.22■■■□□ 2.59
RHOC-217ENST00000527563 IFT140Q96RY7 1462 aa31.2■■■□□ 2.58
RHOC-217ENST00000527563 ZNF608Q9ULD9 1512 aaPredicted RBP31.16■■■□□ 2.58
RHOC-217ENST00000527563 TARBP1Q13395 1621 aaKnown RBP31.07■■■□□ 2.56
RHOC-217ENST00000527563 EIF4G3O43432 1585 aaKnown RBP31.06■■■□□ 2.56
RHOC-217ENST00000527563 OSCARQ8IYS5 282 aa31■■■□□ 2.55
RHOC-217ENST00000527563 POLA1P09884 1462 aaPredicted RBP31■■■□□ 2.55
RHOC-217ENST00000527563 SUPT5HO00267 1087 aaKnown RBP30.98■■■□□ 2.55
RHOC-217ENST00000527563 AQRO60306 1485 aaKnown RBP eCLIP30.89■■■□□ 2.536e-7■■■■■ 47.3
RHOC-217ENST00000527563 CUX1P39880 1505 aa30.88■■■□□ 2.53
RHOC-217ENST00000527563 RAD54L2Q9Y4B4 1467 aa30.87■■■□□ 2.53
RHOC-217ENST00000527563 TRIM41Q8WV44 630 aa30.86■■■□□ 2.53
RHOC-217ENST00000527563 CHD1O14646 1710 aa30.85■■■□□ 2.53
RHOC-217ENST00000527563 FGD5Q6ZNL6 1462 aa30.84■■■□□ 2.53
RHOC-217ENST00000527563 SOGA1O94964 1423 aa30.81■■■□□ 2.52
RHOC-217ENST00000527563 WDR97A6NE52 1622 aa30.74■■■□□ 2.51
RHOC-217ENST00000527563 RIMBP3CA6NJZ7 1639 aa30.73■■■□□ 2.51
RHOC-217ENST00000527563 RIMBP3BA6NNM3 1639 aa30.73■■■□□ 2.51
RHOC-217ENST00000527563 RIMBP3Q9UFD9 1639 aa30.73■■■□□ 2.51
RHOC-217ENST00000527563 TDRD9Q8NDG6 1382 aaKnown RBP30.71■■■□□ 2.51
RHOC-217ENST00000527563 ARHGEF11O15085 1522 aa30.6■■■□□ 2.49
RHOC-217ENST00000527563 PBRM1Q86U86 1689 aa30.59■■■□□ 2.49
RHOC-217ENST00000527563 SNAPC4Q5SXM2 1469 aa30.59■■■□□ 2.49
RHOC-217ENST00000527563 FBLN2P98095 1184 aa30.55■■■□□ 2.48
RHOC-217ENST00000527563 BIVM-ERCC5R4GMW8 1640 aa30.54■■■□□ 2.48
RHOC-217ENST00000527563 GRIN2BQ13224 1484 aa30.53■■■□□ 2.48
RHOC-217ENST00000527563 MAGI1Q96QZ7 1491 aaPredicted RBP30.52■■■□□ 2.48
RHOC-217ENST00000527563 ABCA10Q8WWZ4 1543 aa30.52■■■□□ 2.48
RHOC-217ENST00000527563 ABCA5Q8WWZ7 1642 aa30.51■■■□□ 2.47
RHOC-217ENST00000527563 TOP2BQ02880 1626 aa30.49■■■□□ 2.47
RHOC-217ENST00000527563 GAPVD1Q14C86 1478 aa30.47■■■□□ 2.47
RHOC-217ENST00000527563 SYNJ1O43426 1573 aa30.46■■■□□ 2.47
RHOC-217ENST00000527563 WRNQ14191 1432 aaPredicted RBP eCLIP30.42■■■□□ 2.46
RHOC-217ENST00000527563 SYNJ2O15056 1496 aa30.41■■■□□ 2.46
RHOC-217ENST00000527563 CLASP1Q7Z460 1538 aa30.41■■■□□ 2.46
RHOC-217ENST00000527563 CHMP7Q8WUX9 453 aaPredicted RBP30.37■■■□□ 2.45
RHOC-217ENST00000527563 ARAP1Q96P48 1450 aa30.32■■■□□ 2.44
RHOC-217ENST00000527563 CYB5RLQ6IPT4 315 aa30.26■■■□□ 2.43
RHOC-217ENST00000527563 ADAMTS12P58397 1594 aa30.24■■■□□ 2.43
RHOC-217ENST00000527563 GRIN2AQ12879 1464 aa30.16■■■□□ 2.42
RHOC-217ENST00000527563 ERICH3Q5RHP9 1530 aa30.14■■■□□ 2.42
RHOC-217ENST00000527563 CEP170Q5SW79 1584 aa30.1■■■□□ 2.41
RHOC-217ENST00000527563 FHAD1B1AJZ9 1412 aa30.08■■■□□ 2.41
RHOC-217ENST00000527563 NUP160Q12769 1436 aa30.05■■■□□ 2.4
RHOC-217ENST00000527563 ERCC6L2Q5T890 1561 aa29.97■■■□□ 2.39
RHOC-217ENST00000527563 SHROOM2Q13796 1616 aa29.96■■■□□ 2.39
RHOC-217ENST00000527563 TRHP20396 242 aaPredicted RBP29.84■■■□□ 2.37
RHOC-217ENST00000527563 RUSC2Q8N2Y8 1516 aa29.81■■■□□ 2.36
RHOC-217ENST00000527563 CUL7Q14999 1698 aa29.81■■■□□ 2.36
RHOC-217ENST00000527563 KIF27Q86VH2 1401 aa29.79■■■□□ 2.36
RHOC-217ENST00000527563 IGF1RP08069 1367 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms