RNA–Protein interactions for RNA: ENST00000527555.1

AP002008.2-204, humanhuman

TSL 4

Gene AP002008.2, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.2-204ENST00000527555 NISCHQ9Y2I1 1504 aa25.85■■□□□ 1.73
AP002008.2-204ENST00000527555 CCDC180Q9P1Z9 1646 aa23.09■■□□□ 1.29
AP002008.2-204ENST00000527555 ABCC9O60706 1549 aa22.31■■□□□ 1.16
AP002008.2-204ENST00000527555 RB1CC1Q8TDY2 1594 aa21.61■■□□□ 1.05
AP002008.2-204ENST00000527555 NACADO15069 1562 aa21.61■■□□□ 1.05
AP002008.2-204ENST00000527555 ZCCHC6Q5VYS8 1495 aaKnown RBP21.58■■□□□ 1.05
AP002008.2-204ENST00000527555 MYO15BQ96JP2 1530 aa21.5■■□□□ 1.03
AP002008.2-204ENST00000527555 DCAF1Q9Y4B6 1507 aa21.45■■□□□ 1.02
AP002008.2-204ENST00000527555 DCAF8L2P0C7V8 631 aa21.42■■□□□ 1.02
AP002008.2-204ENST00000527555 UNC13AQ9UPW8 1703 aa21.2■□□□□ 0.98
AP002008.2-204ENST00000527555 SCRIBQ14160 1630 aa20.98■□□□□ 0.95
AP002008.2-204ENST00000527555 BICRAQ9NZM4 1560 aa20.9■□□□□ 0.94
AP002008.2-204ENST00000527555 SHROOM4Q9ULL8 1493 aa20.78■□□□□ 0.92
AP002008.2-204ENST00000527555 PABPN1Q86U42 306 aaKnown RBP eCLIP20.77■□□□□ 0.92
AP002008.2-204ENST00000527555 EIF4G1Q04637 1599 aaKnown RBP20.36■□□□□ 0.85
AP002008.2-204ENST00000527555 CC2D2AQ9P2K1 1620 aa20.26■□□□□ 0.83
AP002008.2-204ENST00000527555 DNAJC5BQ9UF47 199 aa20.23■□□□□ 0.83
AP002008.2-204ENST00000527555 SMARCA4P51532 1647 aa20.1■□□□□ 0.81
AP002008.2-204ENST00000527555 BAZ1AQ9NRL2 1556 aaPredicted RBP20.08■□□□□ 0.81
AP002008.2-204ENST00000527555 CECR2Q9BXF3 1484 aa20.06■□□□□ 0.8
AP002008.2-204ENST00000527555 SMARCA2P51531 1590 aa19.95■□□□□ 0.78
AP002008.2-204ENST00000527555 MROH2BQ7Z745 1585 aa19.9■□□□□ 0.78
AP002008.2-204ENST00000527555 PEG3Q9GZU2 1588 aa19.9■□□□□ 0.78
AP002008.2-204ENST00000527555 ATAD2BQ9ULI0 1458 aa19.88■□□□□ 0.77
AP002008.2-204ENST00000527555 HMGXB3Q12766 1538 aa19.86■□□□□ 0.77
AP002008.2-204ENST00000527555 NCAPD3P42695 1498 aa19.86■□□□□ 0.77
AP002008.2-204ENST00000527555 BAZ1BQ9UIG0 1483 aaKnown RBP19.77■□□□□ 0.76
AP002008.2-204ENST00000527555 WIZO95785 1651 aa19.75■□□□□ 0.75
AP002008.2-204ENST00000527555 RSF1Q96T23 1441 aaPredicted RBP19.68■□□□□ 0.74
AP002008.2-204ENST00000527555 TOP2AP11388 1531 aaKnown RBP19.56■□□□□ 0.72
AP002008.2-204ENST00000527555 LAMC3Q9Y6N6 1575 aa19.4■□□□□ 0.7
AP002008.2-204ENST00000527555 NESP48681 1621 aa19.33■□□□□ 0.68
AP002008.2-204ENST00000527555 PRDM2Q13029 1718 aa19.28■□□□□ 0.68
AP002008.2-204ENST00000527555 ERCC6Q03468 1493 aa19.28■□□□□ 0.68
AP002008.2-204ENST00000527555 CADPSQ9ULU8 1353 aa19.26■□□□□ 0.67
AP002008.2-204ENST00000527555 CCDC88BA6NC98 1476 aa19.24■□□□□ 0.67
AP002008.2-204ENST00000527555 KIF21AQ7Z4S6 1674 aa19.24■□□□□ 0.67
AP002008.2-204ENST00000527555 PDS5BQ9NTI5 1447 aa19.2■□□□□ 0.66
AP002008.2-204ENST00000527555 CFTRP13569 1480 aa19.2■□□□□ 0.66
AP002008.2-204ENST00000527555 SUPT5HO00267 1087 aaKnown RBP19.19■□□□□ 0.66
AP002008.2-204ENST00000527555 THOC2Q8NI27 1593 aaKnown RBP19.13■□□□□ 0.65
AP002008.2-204ENST00000527555 CEP164Q9UPV0 1460 aa19.09■□□□□ 0.65
AP002008.2-204ENST00000527555 FANCD2Q9BXW9 1451 aa19.08■□□□□ 0.64
AP002008.2-204ENST00000527555 CUX2O14529 1486 aa19.05■□□□□ 0.64
AP002008.2-204ENST00000527555 MRC2Q9UBG0 1479 aa19.02■□□□□ 0.63
AP002008.2-204ENST00000527555 WDR62O43379 1518 aa18.99■□□□□ 0.63
AP002008.2-204ENST00000527555 URB2Q14146 1524 aaKnown RBP18.87■□□□□ 0.61
AP002008.2-204ENST00000527555 ABCC8Q09428 1581 aa18.83■□□□□ 0.6
AP002008.2-204ENST00000527555 DNMBPQ6XZF7 1577 aa18.83■□□□□ 0.6
AP002008.2-204ENST00000527555 TOPBP1Q92547 1522 aa18.79■□□□□ 0.6
AP002008.2-204ENST00000527555 CUX1P39880 1505 aa18.69■□□□□ 0.58
AP002008.2-204ENST00000527555 IFT140Q96RY7 1462 aa18.65■□□□□ 0.58
AP002008.2-204ENST00000527555 BIVM-ERCC5R4GMW8 1640 aa18.64■□□□□ 0.57
AP002008.2-204ENST00000527555 POLA1P09884 1462 aaPredicted RBP18.64■□□□□ 0.57
AP002008.2-204ENST00000527555 TARBP1Q13395 1621 aaKnown RBP18.62■□□□□ 0.57
AP002008.2-204ENST00000527555 FGD5Q6ZNL6 1462 aa18.61■□□□□ 0.57
AP002008.2-204ENST00000527555 TOP2BQ02880 1626 aa18.6■□□□□ 0.57
AP002008.2-204ENST00000527555 WRNQ14191 1432 aaPredicted RBP eCLIP18.59■□□□□ 0.57
AP002008.2-204ENST00000527555 SYNJ1O43426 1573 aa18.58■□□□□ 0.56
AP002008.2-204ENST00000527555 WDR97A6NE52 1622 aa18.56■□□□□ 0.56
AP002008.2-204ENST00000527555 EIF4G3O43432 1585 aaKnown RBP18.56■□□□□ 0.56
AP002008.2-204ENST00000527555 SOGA1O94964 1423 aa18.52■□□□□ 0.56
AP002008.2-204ENST00000527555 ZNF608Q9ULD9 1512 aaPredicted RBP18.51■□□□□ 0.55
AP002008.2-204ENST00000527555 RAD54L2Q9Y4B4 1467 aa18.5■□□□□ 0.55
AP002008.2-204ENST00000527555 ABCA10Q8WWZ4 1543 aa18.44■□□□□ 0.54
AP002008.2-204ENST00000527555 PBRM1Q86U86 1689 aa18.44■□□□□ 0.54
AP002008.2-204ENST00000527555 ABCA5Q8WWZ7 1642 aa18.42■□□□□ 0.54
AP002008.2-204ENST00000527555 AQRO60306 1485 aaKnown RBP eCLIP18.39■□□□□ 0.54
AP002008.2-204ENST00000527555 TDRD9Q8NDG6 1382 aaKnown RBP18.36■□□□□ 0.53
AP002008.2-204ENST00000527555 GAPVD1Q14C86 1478 aa18.35■□□□□ 0.53
AP002008.2-204ENST00000527555 CHD1O14646 1710 aa18.35■□□□□ 0.53
AP002008.2-204ENST00000527555 GRIN2BQ13224 1484 aa18.33■□□□□ 0.53
AP002008.2-204ENST00000527555 MAGI1Q96QZ7 1491 aaPredicted RBP18.31■□□□□ 0.52
AP002008.2-204ENST00000527555 SNAPC4Q5SXM2 1469 aa18.3■□□□□ 0.52
AP002008.2-204ENST00000527555 ERICH3Q5RHP9 1530 aa18.26■□□□□ 0.51
AP002008.2-204ENST00000527555 ADAMTS12P58397 1594 aa18.24■□□□□ 0.51
AP002008.2-204ENST00000527555 SYNJ2O15056 1496 aa18.21■□□□□ 0.51
AP002008.2-204ENST00000527555 KIF27Q86VH2 1401 aa18.21■□□□□ 0.51
AP002008.2-204ENST00000527555 DNAJC5Q9H3Z4 198 aa18.2■□□□□ 0.5
AP002008.2-204ENST00000527555 CUL7Q14999 1698 aa18.18■□□□□ 0.5
AP002008.2-204ENST00000527555 OSCARQ8IYS5 282 aa18.16■□□□□ 0.5
AP002008.2-204ENST00000527555 TRIM41Q8WV44 630 aa18.15■□□□□ 0.5
AP002008.2-204ENST00000527555 FHAD1B1AJZ9 1412 aa18.14■□□□□ 0.49
AP002008.2-204ENST00000527555 FBLN2P98095 1184 aa18.13■□□□□ 0.49
AP002008.2-204ENST00000527555 CHMP7Q8WUX9 453 aaPredicted RBP18.11■□□□□ 0.49
AP002008.2-204ENST00000527555 GRIN2AQ12879 1464 aa18.11■□□□□ 0.49
AP002008.2-204ENST00000527555 CLASP1Q7Z460 1538 aa18.08■□□□□ 0.48
AP002008.2-204ENST00000527555 IGF1RP08069 1367 aa18.04■□□□□ 0.48
AP002008.2-204ENST00000527555 CEP170Q5SW79 1584 aa18.03■□□□□ 0.48
AP002008.2-204ENST00000527555 NUP160Q12769 1436 aa18.01■□□□□ 0.47
AP002008.2-204ENST00000527555 RUSC2Q8N2Y8 1516 aa18■□□□□ 0.47
AP002008.2-204ENST00000527555 RIMBP3CA6NJZ7 1639 aa17.98■□□□□ 0.47
AP002008.2-204ENST00000527555 RIMBP3BA6NNM3 1639 aa17.98■□□□□ 0.47
AP002008.2-204ENST00000527555 RIMBP3Q9UFD9 1639 aa17.98■□□□□ 0.47
AP002008.2-204ENST00000527555 ARHGEF11O15085 1522 aa17.97■□□□□ 0.47
AP002008.2-204ENST00000527555 CARMIL1Q5VZK9 1371 aa17.96■□□□□ 0.47
AP002008.2-204ENST00000527555 CHIC1Q5VXU3 224 aa17.96■□□□□ 0.47
AP002008.2-204ENST00000527555 EEA1Q15075 1411 aa17.96■□□□□ 0.47
AP002008.2-204ENST00000527555 SHROOM2Q13796 1616 aa17.94■□□□□ 0.46
AP002008.2-204ENST00000527555 RAPGEF2Q9Y4G8 1499 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms