RNA–Protein interactions for RNA: ENST00000527535.5

PAK1-209, Transcript of p21 (RAC1) activated kinase 1, humanhuman

TSL 5

Gene PAK1, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAK1-209ENST00000527535 NISCHQ9Y2I1 1504 aa24.38■■□□□ 1.49
PAK1-209ENST00000527535 CCDC180Q9P1Z9 1646 aa21.7■■□□□ 1.06
PAK1-209ENST00000527535 ABCC9O60706 1549 aa21.36■■□□□ 1.01
PAK1-209ENST00000527535 RB1CC1Q8TDY2 1594 aa20.5■□□□□ 0.87
PAK1-209ENST00000527535 NACADO15069 1562 aa20.46■□□□□ 0.87
PAK1-209ENST00000527535 DCAF8L2P0C7V8 631 aa20.38■□□□□ 0.85
PAK1-209ENST00000527535 MYO15BQ96JP2 1530 aa20.33■□□□□ 0.85
PAK1-209ENST00000527535 ZCCHC6Q5VYS8 1495 aaKnown RBP20.28■□□□□ 0.84
PAK1-209ENST00000527535 DCAF1Q9Y4B6 1507 aa20.19■□□□□ 0.82
PAK1-209ENST00000527535 UNC13AQ9UPW8 1703 aa20■□□□□ 0.79
PAK1-209ENST00000527535 PABPN1Q86U42 306 aaKnown RBP eCLIP19.96■□□□□ 0.79
PAK1-209ENST00000527535 BICRAQ9NZM4 1560 aa19.9■□□□□ 0.78
PAK1-209ENST00000527535 DNAJC5BQ9UF47 199 aa19.78■□□□□ 0.76
PAK1-209ENST00000527535 SCRIBQ14160 1630 aa19.76■□□□□ 0.75
PAK1-209ENST00000527535 SHROOM4Q9ULL8 1493 aa19.71■□□□□ 0.75
PAK1-209ENST00000527535 EIF4G1Q04637 1599 aaKnown RBP19.38■□□□□ 0.69
PAK1-209ENST00000527535 CC2D2AQ9P2K1 1620 aa19.32■□□□□ 0.68
PAK1-209ENST00000527535 CECR2Q9BXF3 1484 aa19.22■□□□□ 0.67
PAK1-209ENST00000527535 SMARCA4P51532 1647 aa18.92■□□□□ 0.62
PAK1-209ENST00000527535 NCAPD3P42695 1498 aa18.9■□□□□ 0.62
PAK1-209ENST00000527535 BAZ1AQ9NRL2 1556 aaPredicted RBP18.89■□□□□ 0.62
PAK1-209ENST00000527535 ATAD2BQ9ULI0 1458 aa18.88■□□□□ 0.61
PAK1-209ENST00000527535 SMARCA2P51531 1590 aa18.84■□□□□ 0.61
PAK1-209ENST00000527535 HMGXB3Q12766 1538 aa18.78■□□□□ 0.6
PAK1-209ENST00000527535 MROH2BQ7Z745 1585 aa18.77■□□□□ 0.6
PAK1-209ENST00000527535 PEG3Q9GZU2 1588 aa18.77■□□□□ 0.6
PAK1-209ENST00000527535 BAZ1BQ9UIG0 1483 aaKnown RBP18.69■□□□□ 0.58
PAK1-209ENST00000527535 WIZO95785 1651 aa18.54■□□□□ 0.56
PAK1-209ENST00000527535 RSF1Q96T23 1441 aaPredicted RBP18.53■□□□□ 0.56
PAK1-209ENST00000527535 NESP48681 1621 aa18.45■□□□□ 0.54
PAK1-209ENST00000527535 ERCC6Q03468 1493 aa18.42■□□□□ 0.54
PAK1-209ENST00000527535 LAMC3Q9Y6N6 1575 aa18.4■□□□□ 0.54
PAK1-209ENST00000527535 TOP2AP11388 1531 aaKnown RBP18.35■□□□□ 0.53
PAK1-209ENST00000527535 CADPSQ9ULU8 1353 aa18.34■□□□□ 0.53
PAK1-209ENST00000527535 CUX2O14529 1486 aa18.31■□□□□ 0.52
PAK1-209ENST00000527535 PDS5BQ9NTI5 1447 aa18.29■□□□□ 0.52
PAK1-209ENST00000527535 CFTRP13569 1480 aa18.2■□□□□ 0.5
PAK1-209ENST00000527535 KIF21AQ7Z4S6 1674 aa18.2■□□□□ 0.5
PAK1-209ENST00000527535 THOC2Q8NI27 1593 aaKnown RBP18.2■□□□□ 0.5
PAK1-209ENST00000527535 CCDC88BA6NC98 1476 aa18.14■□□□□ 0.5
PAK1-209ENST00000527535 FANCD2Q9BXW9 1451 aa18.11■□□□□ 0.49
PAK1-209ENST00000527535 MRC2Q9UBG0 1479 aa18.1■□□□□ 0.49
PAK1-209ENST00000527535 CEP164Q9UPV0 1460 aa18.08■□□□□ 0.49
PAK1-209ENST00000527535 WDR62O43379 1518 aa18.05■□□□□ 0.48
PAK1-209ENST00000527535 PRDM2Q13029 1718 aa17.98■□□□□ 0.47
PAK1-209ENST00000527535 URB2Q14146 1524 aaKnown RBP17.93■□□□□ 0.46
PAK1-209ENST00000527535 DNAJC5Q9H3Z4 198 aa17.93■□□□□ 0.46
PAK1-209ENST00000527535 SUPT5HO00267 1087 aaKnown RBP17.91■□□□□ 0.46
PAK1-209ENST00000527535 ABCC8Q09428 1581 aa17.81■□□□□ 0.44
PAK1-209ENST00000527535 TOPBP1Q92547 1522 aa17.8■□□□□ 0.44
PAK1-209ENST00000527535 DNMBPQ6XZF7 1577 aa17.76■□□□□ 0.43
PAK1-209ENST00000527535 IFT140Q96RY7 1462 aa17.74■□□□□ 0.43
PAK1-209ENST00000527535 ZNF608Q9ULD9 1512 aaPredicted RBP17.66■□□□□ 0.42
PAK1-209ENST00000527535 POLA1P09884 1462 aaPredicted RBP17.65■□□□□ 0.42
PAK1-209ENST00000527535 CUX1P39880 1505 aa17.62■□□□□ 0.41
PAK1-209ENST00000527535 TARBP1Q13395 1621 aaKnown RBP17.61■□□□□ 0.41
PAK1-209ENST00000527535 FGD5Q6ZNL6 1462 aa17.57■□□□□ 0.4
PAK1-209ENST00000527535 SOGA1O94964 1423 aa17.57■□□□□ 0.4
PAK1-209ENST00000527535 RAD54L2Q9Y4B4 1467 aa17.56■□□□□ 0.4
PAK1-209ENST00000527535 EIF4G3O43432 1585 aaKnown RBP17.56■□□□□ 0.4
PAK1-209ENST00000527535 AQRO60306 1485 aaKnown RBP eCLIP17.54■□□□□ 0.4
PAK1-209ENST00000527535 OSCARQ8IYS5 282 aa17.53■□□□□ 0.4
PAK1-209ENST00000527535 TDRD9Q8NDG6 1382 aaKnown RBP17.49■□□□□ 0.39
PAK1-209ENST00000527535 WDR97A6NE52 1622 aa17.48■□□□□ 0.39
PAK1-209ENST00000527535 WRNQ14191 1432 aaPredicted RBP eCLIP17.46■□□□□ 0.39
PAK1-209ENST00000527535 TOP2BQ02880 1626 aa17.43■□□□□ 0.38
PAK1-209ENST00000527535 BIVM-ERCC5R4GMW8 1640 aa17.42■□□□□ 0.38
PAK1-209ENST00000527535 ABCA10Q8WWZ4 1543 aa17.42■□□□□ 0.38
PAK1-209ENST00000527535 SYNJ1O43426 1573 aa17.4■□□□□ 0.38
PAK1-209ENST00000527535 GRIN2BQ13224 1484 aa17.38■□□□□ 0.37
PAK1-209ENST00000527535 GAPVD1Q14C86 1478 aa17.37■□□□□ 0.37
PAK1-209ENST00000527535 SNAPC4Q5SXM2 1469 aa17.37■□□□□ 0.37
PAK1-209ENST00000527535 MAGI1Q96QZ7 1491 aaPredicted RBP17.36■□□□□ 0.37
PAK1-209ENST00000527535 CHD1O14646 1710 aa17.34■□□□□ 0.37
PAK1-209ENST00000527535 ABCA5Q8WWZ7 1642 aa17.34■□□□□ 0.37
PAK1-209ENST00000527535 FBLN2P98095 1184 aa17.33■□□□□ 0.36
PAK1-209ENST00000527535 CHMP7Q8WUX9 453 aaPredicted RBP17.29■□□□□ 0.36
PAK1-209ENST00000527535 SYNJ2O15056 1496 aa17.29■□□□□ 0.36
PAK1-209ENST00000527535 PBRM1Q86U86 1689 aa17.29■□□□□ 0.36
PAK1-209ENST00000527535 ARHGEF11O15085 1522 aa17.23■□□□□ 0.35
PAK1-209ENST00000527535 RIMBP3CA6NJZ7 1639 aa17.23■□□□□ 0.35
PAK1-209ENST00000527535 RIMBP3BA6NNM3 1639 aa17.23■□□□□ 0.35
PAK1-209ENST00000527535 RIMBP3Q9UFD9 1639 aa17.23■□□□□ 0.35
PAK1-209ENST00000527535 TRIM41Q8WV44 630 aa17.21■□□□□ 0.35
PAK1-209ENST00000527535 ERICH3Q5RHP9 1530 aa17.2■□□□□ 0.34
PAK1-209ENST00000527535 CLASP1Q7Z460 1538 aa17.2■□□□□ 0.34
PAK1-209ENST00000527535 ADAMTS12P58397 1594 aa17.18■□□□□ 0.34
PAK1-209ENST00000527535 FHAD1B1AJZ9 1412 aa17.17■□□□□ 0.34
PAK1-209ENST00000527535 GRIN2AQ12879 1464 aa17.16■□□□□ 0.34
PAK1-209ENST00000527535 NUP160Q12769 1436 aa17.11■□□□□ 0.33
PAK1-209ENST00000527535 KIF27Q86VH2 1401 aa17.11■□□□□ 0.33
PAK1-209ENST00000527535 ARAP1Q96P48 1450 aa17.08■□□□□ 0.32
PAK1-209ENST00000527535 IGF1RP08069 1367 aa17.08■□□□□ 0.32
PAK1-209ENST00000527535 CYB5RLQ6IPT4 315 aa17.08■□□□□ 0.32
PAK1-209ENST00000527535 CEP170Q5SW79 1584 aa17.06■□□□□ 0.32
PAK1-209ENST00000527535 CUL7Q14999 1698 aa16.99■□□□□ 0.31
PAK1-209ENST00000527535 SHROOM2Q13796 1616 aa16.97■□□□□ 0.31
PAK1-209ENST00000527535 CARMIL1Q5VZK9 1371 aa16.95■□□□□ 0.3
PAK1-209ENST00000527535 ERCC6L2Q5T890 1561 aa16.94■□□□□ 0.3
PAK1-209ENST00000527535 RUSC2Q8N2Y8 1516 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms