RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 NISCHQ9Y2I1 1504 aa41.22■■■■■ 4.19
NR1H3-229ENST00000527464 CCDC180Q9P1Z9 1646 aa36.74■■■■□ 3.47
NR1H3-229ENST00000527464 ABCC9O60706 1549 aa35.99■■■■□ 3.35
NR1H3-229ENST00000527464 RB1CC1Q8TDY2 1594 aa34.64■■■■□ 3.14
NR1H3-229ENST00000527464 NACADO15069 1562 aa34.58■■■■□ 3.13
NR1H3-229ENST00000527464 DCAF8L2P0C7V8 631 aa34.43■■■■□ 3.1
NR1H3-229ENST00000527464 MYO15BQ96JP2 1530 aa34.38■■■■□ 3.09
NR1H3-229ENST00000527464 ZCCHC6Q5VYS8 1495 aaKnown RBP34.29■■■■□ 3.08
NR1H3-229ENST00000527464 DCAF1Q9Y4B6 1507 aa34.15■■■■□ 3.06
NR1H3-229ENST00000527464 UNC13AQ9UPW8 1703 aa33.79■■■■□ 3
NR1H3-229ENST00000527464 PABPN1Q86U42 306 aaKnown RBP eCLIP33.6■■■□□ 2.97
NR1H3-229ENST00000527464 BICRAQ9NZM4 1560 aa33.55■■■□□ 2.96
NR1H3-229ENST00000527464 SCRIBQ14160 1630 aa33.42■■■□□ 2.94
NR1H3-229ENST00000527464 SHROOM4Q9ULL8 1493 aa33.3■■■□□ 2.92
NR1H3-229ENST00000527464 DNAJC5BQ9UF47 199 aa33.15■■■□□ 2.9
NR1H3-229ENST00000527464 EIF4G1Q04637 1599 aaKnown RBP32.69■■■□□ 2.82
NR1H3-229ENST00000527464 CC2D2AQ9P2K1 1620 aa32.58■■■□□ 2.81
NR1H3-229ENST00000527464 CECR2Q9BXF3 1484 aa32.39■■■□□ 2.78
NR1H3-229ENST00000527464 SMARCA4P51532 1647 aa32■■■□□ 2.71
NR1H3-229ENST00000527464 BAZ1AQ9NRL2 1556 aaPredicted RBP31.97■■■□□ 2.71
NR1H3-229ENST00000527464 NCAPD3P42695 1498 aa31.91■■■□□ 2.7
NR1H3-229ENST00000527464 ATAD2BQ9ULI0 1458 aa31.87■■■□□ 2.69
NR1H3-229ENST00000527464 SMARCA2P51531 1590 aa31.85■■■□□ 2.69
NR1H3-229ENST00000527464 PEG3Q9GZU2 1588 aa31.73■■■□□ 2.67
NR1H3-229ENST00000527464 HMGXB3Q12766 1538 aa31.73■■■□□ 2.67
NR1H3-229ENST00000527464 MROH2BQ7Z745 1585 aa31.73■■■□□ 2.67
NR1H3-229ENST00000527464 BAZ1BQ9UIG0 1483 aaKnown RBP31.59■■■□□ 2.65
NR1H3-229ENST00000527464 WIZO95785 1651 aa31.35■■■□□ 2.61
NR1H3-229ENST00000527464 RSF1Q96T23 1441 aaPredicted RBP31.33■■■□□ 2.61
NR1H3-229ENST00000527464 NESP48681 1621 aa31.09■■■□□ 2.57
NR1H3-229ENST00000527464 LAMC3Q9Y6N6 1575 aa31.09■■■□□ 2.57
NR1H3-229ENST00000527464 ERCC6Q03468 1493 aa31.07■■■□□ 2.56
NR1H3-229ENST00000527464 TOP2AP11388 1531 aaKnown RBP31.06■■■□□ 2.56
NR1H3-229ENST00000527464 CADPSQ9ULU8 1353 aa30.96■■■□□ 2.55
NR1H3-229ENST00000527464 PDS5BQ9NTI5 1447 aa30.89■■■□□ 2.53
NR1H3-229ENST00000527464 CUX2O14529 1486 aa30.84■■■□□ 2.53
NR1H3-229ENST00000527464 CFTRP13569 1480 aa30.74■■■□□ 2.51
NR1H3-229ENST00000527464 KIF21AQ7Z4S6 1674 aa30.74■■■□□ 2.51
NR1H3-229ENST00000527464 THOC2Q8NI27 1593 aaKnown RBP30.69■■■□□ 2.5
NR1H3-229ENST00000527464 CCDC88BA6NC98 1476 aa30.69■■■□□ 2.5
NR1H3-229ENST00000527464 FANCD2Q9BXW9 1451 aa30.57■■■□□ 2.48
NR1H3-229ENST00000527464 CEP164Q9UPV0 1460 aa30.56■■■□□ 2.48
NR1H3-229ENST00000527464 MRC2Q9UBG0 1479 aa30.55■■■□□ 2.48
NR1H3-229ENST00000527464 PRDM2Q13029 1718 aa30.5■■■□□ 2.47
NR1H3-229ENST00000527464 WDR62O43379 1518 aa30.45■■■□□ 2.47
NR1H3-229ENST00000527464 SUPT5HO00267 1087 aaKnown RBP30.38■■■□□ 2.45
NR1H3-229ENST00000527464 URB2Q14146 1524 aaKnown RBP30.26■■■□□ 2.43
NR1H3-229ENST00000527464 ABCC8Q09428 1581 aa30.14■■■□□ 2.42
NR1H3-229ENST00000527464 TOPBP1Q92547 1522 aa30.07■■■□□ 2.4
NR1H3-229ENST00000527464 DNAJC5Q9H3Z4 198 aa30.05■■■□□ 2.4
NR1H3-229ENST00000527464 DNMBPQ6XZF7 1577 aa30.04■■■□□ 2.4
NR1H3-229ENST00000527464 IFT140Q96RY7 1462 aa29.95■■■□□ 2.39
NR1H3-229ENST00000527464 POLA1P09884 1462 aaPredicted RBP29.8■■■□□ 2.36
NR1H3-229ENST00000527464 CUX1P39880 1505 aa29.77■■■□□ 2.36
NR1H3-229ENST00000527464 ZNF608Q9ULD9 1512 aaPredicted RBP29.76■■■□□ 2.35
NR1H3-229ENST00000527464 TARBP1Q13395 1621 aaKnown RBP29.75■■■□□ 2.35
NR1H3-229ENST00000527464 FGD5Q6ZNL6 1462 aa29.7■■■□□ 2.35
NR1H3-229ENST00000527464 SOGA1O94964 1423 aa29.7■■■□□ 2.34
NR1H3-229ENST00000527464 EIF4G3O43432 1585 aaKnown RBP29.64■■■□□ 2.34
NR1H3-229ENST00000527464 RAD54L2Q9Y4B4 1467 aa29.64■■■□□ 2.34
NR1H3-229ENST00000527464 AQRO60306 1485 aaKnown RBP eCLIP29.59■■■□□ 2.339e-8■■■■□ 21.2
NR1H3-229ENST00000527464 WDR97A6NE52 1622 aa29.59■■■□□ 2.33
NR1H3-229ENST00000527464 WRNQ14191 1432 aaPredicted RBP eCLIP29.56■■■□□ 2.32
NR1H3-229ENST00000527464 OSCARQ8IYS5 282 aa29.53■■■□□ 2.32
NR1H3-229ENST00000527464 TOP2BQ02880 1626 aa29.51■■■□□ 2.31
NR1H3-229ENST00000527464 TDRD9Q8NDG6 1382 aaKnown RBP29.51■■■□□ 2.31
NR1H3-229ENST00000527464 BIVM-ERCC5R4GMW8 1640 aa29.5■■■□□ 2.31
NR1H3-229ENST00000527464 ABCA10Q8WWZ4 1543 aa29.45■■■□□ 2.3
NR1H3-229ENST00000527464 SYNJ1O43426 1573 aa29.44■■■□□ 2.3
NR1H3-229ENST00000527464 GRIN2BQ13224 1484 aa29.37■■■□□ 2.29
NR1H3-229ENST00000527464 GAPVD1Q14C86 1478 aa29.35■■■□□ 2.29
NR1H3-229ENST00000527464 MAGI1Q96QZ7 1491 aaPredicted RBP29.33■■■□□ 2.29
NR1H3-229ENST00000527464 ABCA5Q8WWZ7 1642 aa29.31■■■□□ 2.28
NR1H3-229ENST00000527464 SNAPC4Q5SXM2 1469 aa29.31■■■□□ 2.28
NR1H3-229ENST00000527464 CHD1O14646 1710 aa29.3■■■□□ 2.28
NR1H3-229ENST00000527464 PBRM1Q86U86 1689 aa29.27■■■□□ 2.28
NR1H3-229ENST00000527464 FBLN2P98095 1184 aa29.25■■■□□ 2.27
NR1H3-229ENST00000527464 CHMP7Q8WUX9 453 aaPredicted RBP29.2■■■□□ 2.26
NR1H3-229ENST00000527464 SYNJ2O15056 1496 aa29.2■■■□□ 2.26
NR1H3-229ENST00000527464 ERICH3Q5RHP9 1530 aa29.1■■■□□ 2.25
NR1H3-229ENST00000527464 ADAMTS12P58397 1594 aa29.04■■■□□ 2.24
NR1H3-229ENST00000527464 FHAD1B1AJZ9 1412 aa29.03■■■□□ 2.24
NR1H3-229ENST00000527464 RIMBP3CA6NJZ7 1639 aa29.02■■■□□ 2.24
NR1H3-229ENST00000527464 RIMBP3BA6NNM3 1639 aa29.02■■■□□ 2.24
NR1H3-229ENST00000527464 RIMBP3Q9UFD9 1639 aa29.02■■■□□ 2.24
NR1H3-229ENST00000527464 ARHGEF11O15085 1522 aa29.01■■■□□ 2.23
NR1H3-229ENST00000527464 CLASP1Q7Z460 1538 aa29■■■□□ 2.23
NR1H3-229ENST00000527464 GRIN2AQ12879 1464 aa28.98■■■□□ 2.23
NR1H3-229ENST00000527464 KIF27Q86VH2 1401 aa28.97■■■□□ 2.23
NR1H3-229ENST00000527464 TRIM41Q8WV44 630 aa28.92■■■□□ 2.22
NR1H3-229ENST00000527464 NUP160Q12769 1436 aa28.87■■■□□ 2.21
NR1H3-229ENST00000527464 IGF1RP08069 1367 aa28.86■■■□□ 2.21
NR1H3-229ENST00000527464 CEP170Q5SW79 1584 aa28.81■■■□□ 2.2
NR1H3-229ENST00000527464 CUL7Q14999 1698 aa28.8■■■□□ 2.2
NR1H3-229ENST00000527464 ARAP1Q96P48 1450 aa28.76■■■□□ 2.19
NR1H3-229ENST00000527464 CYB5RLQ6IPT4 315 aa28.74■■■□□ 2.19
NR1H3-229ENST00000527464 CARMIL1Q5VZK9 1371 aa28.68■■■□□ 2.18
NR1H3-229ENST00000527464 SHROOM2Q13796 1616 aa28.66■■■□□ 2.18
NR1H3-229ENST00000527464 RUSC2Q8N2Y8 1516 aa28.6■■■□□ 2.17
NR1H3-229ENST00000527464 JPH4Q96JJ6 628 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 1632.4 ms