RNA–Protein interactions for RNA: ENST00000527371.1

PEX16-206, Transcript of peroxisomal biogenesis factor 16, humanhuman

TSL 3

Gene PEX16, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX16-206ENST00000527371 NISCHQ9Y2I1 1504 aa32.65■■■□□ 2.82
PEX16-206ENST00000527371 ABCC9O60706 1549 aa29.44■■■□□ 2.3
PEX16-206ENST00000527371 CCDC180Q9P1Z9 1646 aa29.24■■■□□ 2.27
PEX16-206ENST00000527371 RB1CC1Q8TDY2 1594 aa27.92■■■□□ 2.06
PEX16-206ENST00000527371 DNAJC5BQ9UF47 199 aa27.8■■■□□ 2.04
PEX16-206ENST00000527371 NACADO15069 1562 aa27.72■■■□□ 2.03
PEX16-206ENST00000527371 DCAF8L2P0C7V8 631 aa27.66■■■□□ 2.02
PEX16-206ENST00000527371 PABPN1Q86U42 306 aaKnown RBP eCLIP27.45■■□□□ 1.98
PEX16-206ENST00000527371 MYO15BQ96JP2 1530 aa27.32■■□□□ 1.96
PEX16-206ENST00000527371 UNC13AQ9UPW8 1703 aa27.24■■□□□ 1.95
PEX16-206ENST00000527371 BICRAQ9NZM4 1560 aa27.16■■□□□ 1.94
PEX16-206ENST00000527371 ZCCHC6Q5VYS8 1495 aaKnown RBP27.02■■□□□ 1.92
PEX16-206ENST00000527371 DCAF1Q9Y4B6 1507 aa26.94■■□□□ 1.9
PEX16-206ENST00000527371 SHROOM4Q9ULL8 1493 aa26.72■■□□□ 1.87
PEX16-206ENST00000527371 SCRIBQ14160 1630 aa26.68■■□□□ 1.86
PEX16-206ENST00000527371 CC2D2AQ9P2K1 1620 aa26.54■■□□□ 1.84
PEX16-206ENST00000527371 CECR2Q9BXF3 1484 aa26.51■■□□□ 1.83
PEX16-206ENST00000527371 EIF4G1Q04637 1599 aaKnown RBP26.47■■□□□ 1.83
PEX16-206ENST00000527371 NCAPD3P42695 1498 aa25.65■■□□□ 1.7
PEX16-206ENST00000527371 ATAD2BQ9ULI0 1458 aa25.55■■□□□ 1.68
PEX16-206ENST00000527371 DNAJC5Q9H3Z4 198 aa25.55■■□□□ 1.68
PEX16-206ENST00000527371 SMARCA4P51532 1647 aa25.45■■□□□ 1.66
PEX16-206ENST00000527371 SMARCA2P51531 1590 aa25.42■■□□□ 1.66
PEX16-206ENST00000527371 ERCC6Q03468 1493 aa25.39■■□□□ 1.65
PEX16-206ENST00000527371 HMGXB3Q12766 1538 aa25.38■■□□□ 1.65
PEX16-206ENST00000527371 CUX2O14529 1486 aa25.37■■□□□ 1.65
PEX16-206ENST00000527371 BAZ1AQ9NRL2 1556 aaPredicted RBP25.31■■□□□ 1.64
PEX16-206ENST00000527371 NESP48681 1621 aa25.27■■□□□ 1.64
PEX16-206ENST00000527371 BAZ1BQ9UIG0 1483 aaKnown RBP25.27■■□□□ 1.64
PEX16-206ENST00000527371 PEG3Q9GZU2 1588 aa25.21■■□□□ 1.63
PEX16-206ENST00000527371 MROH2BQ7Z745 1585 aa25.17■■□□□ 1.62
PEX16-206ENST00000527371 LAMC3Q9Y6N6 1575 aa25.02■■□□□ 1.6
PEX16-206ENST00000527371 THOC2Q8NI27 1593 aaKnown RBP24.97■■□□□ 1.59
PEX16-206ENST00000527371 PDS5BQ9NTI5 1447 aa24.92■■□□□ 1.58
PEX16-206ENST00000527371 CADPSQ9ULU8 1353 aa24.87■■□□□ 1.57
PEX16-206ENST00000527371 KIF21AQ7Z4S6 1674 aa24.85■■□□□ 1.57
PEX16-206ENST00000527371 WIZO95785 1651 aa24.83■■□□□ 1.57
PEX16-206ENST00000527371 MRC2Q9UBG0 1479 aa24.7■■□□□ 1.54
PEX16-206ENST00000527371 RSF1Q96T23 1441 aaPredicted RBP24.64■■□□□ 1.54
PEX16-206ENST00000527371 WDR62O43379 1518 aa24.62■■□□□ 1.53
PEX16-206ENST00000527371 CEP164Q9UPV0 1460 aa24.57■■□□□ 1.52
PEX16-206ENST00000527371 FANCD2Q9BXW9 1451 aa24.56■■□□□ 1.52
PEX16-206ENST00000527371 CFTRP13569 1480 aa24.55■■□□□ 1.52
PEX16-206ENST00000527371 TOP2AP11388 1531 aaKnown RBP24.5■■□□□ 1.51
PEX16-206ENST00000527371 URB2Q14146 1524 aaKnown RBP24.38■■□□□ 1.49
PEX16-206ENST00000527371 TRIM41Q8WV44 630 aa24.37■■□□□ 1.49
PEX16-206ENST00000527371 CCDC88BA6NC98 1476 aa24.28■■□□□ 1.48
PEX16-206ENST00000527371 OSCARQ8IYS5 282 aa24.27■■□□□ 1.48
PEX16-206ENST00000527371 PRDM2Q13029 1718 aa24.15■■□□□ 1.46
PEX16-206ENST00000527371 ZNF608Q9ULD9 1512 aaPredicted RBP24.1■■□□□ 1.45
PEX16-206ENST00000527371 IFT140Q96RY7 1462 aa24.09■■□□□ 1.45
PEX16-206ENST00000527371 TOPBP1Q92547 1522 aa24.08■■□□□ 1.45
PEX16-206ENST00000527371 ABCC8Q09428 1581 aa24■■□□□ 1.43
PEX16-206ENST00000527371 DNMBPQ6XZF7 1577 aa23.95■■□□□ 1.43
PEX16-206ENST00000527371 EIF4G3O43432 1585 aaKnown RBP23.89■■□□□ 1.41
PEX16-206ENST00000527371 RIMBP3CA6NJZ7 1639 aa23.88■■□□□ 1.41
PEX16-206ENST00000527371 RIMBP3BA6NNM3 1639 aa23.88■■□□□ 1.41
PEX16-206ENST00000527371 RIMBP3Q9UFD9 1639 aa23.88■■□□□ 1.41
PEX16-206ENST00000527371 AQRO60306 1485 aaKnown RBP eCLIP23.88■■□□□ 1.41
PEX16-206ENST00000527371 TARBP1Q13395 1621 aaKnown RBP23.86■■□□□ 1.41
PEX16-206ENST00000527371 POLA1P09884 1462 aaPredicted RBP23.83■■□□□ 1.41
PEX16-206ENST00000527371 ARHGEF11O15085 1522 aa23.82■■□□□ 1.4
PEX16-206ENST00000527371 RAD54L2Q9Y4B4 1467 aa23.78■■□□□ 1.4
PEX16-206ENST00000527371 SOGA1O94964 1423 aa23.76■■□□□ 1.39
PEX16-206ENST00000527371 FBLN2P98095 1184 aa23.75■■□□□ 1.39
PEX16-206ENST00000527371 TDRD9Q8NDG6 1382 aaKnown RBP23.74■■□□□ 1.39
PEX16-206ENST00000527371 CYB5RLQ6IPT4 315 aa23.72■■□□□ 1.39
PEX16-206ENST00000527371 CHD1O14646 1710 aa23.71■■□□□ 1.39
PEX16-206ENST00000527371 FGD5Q6ZNL6 1462 aa23.67■■□□□ 1.38
PEX16-206ENST00000527371 CUX1P39880 1505 aa23.64■■□□□ 1.38
PEX16-206ENST00000527371 SNAPC4Q5SXM2 1469 aa23.6■■□□□ 1.37
PEX16-206ENST00000527371 ARAP1Q96P48 1450 aa23.6■■□□□ 1.37
PEX16-206ENST00000527371 CHMP7Q8WUX9 453 aaPredicted RBP23.56■■□□□ 1.36
PEX16-206ENST00000527371 WDR97A6NE52 1622 aa23.55■■□□□ 1.36
PEX16-206ENST00000527371 GRIN2BQ13224 1484 aa23.53■■□□□ 1.36
PEX16-206ENST00000527371 MAGI1Q96QZ7 1491 aaPredicted RBP23.51■■□□□ 1.35
PEX16-206ENST00000527371 SUPT5HO00267 1087 aaKnown RBP23.51■■□□□ 1.35
PEX16-206ENST00000527371 CLASP1Q7Z460 1538 aa23.49■■□□□ 1.35
PEX16-206ENST00000527371 TRHP20396 242 aaPredicted RBP23.46■■□□□ 1.35
PEX16-206ENST00000527371 SYNJ2O15056 1496 aa23.45■■□□□ 1.34
PEX16-206ENST00000527371 GAPVD1Q14C86 1478 aa23.43■■□□□ 1.34
PEX16-206ENST00000527371 SYNJ1O43426 1573 aa23.43■■□□□ 1.34
PEX16-206ENST00000527371 ABCA10Q8WWZ4 1543 aa23.39■■□□□ 1.34
PEX16-206ENST00000527371 PBRM1Q86U86 1689 aa23.35■■□□□ 1.33
PEX16-206ENST00000527371 ABCA5Q8WWZ7 1642 aa23.33■■□□□ 1.32
PEX16-206ENST00000527371 WRNQ14191 1432 aaPredicted RBP eCLIP23.3■■□□□ 1.32
PEX16-206ENST00000527371 GRIN2AQ12879 1464 aa23.22■■□□□ 1.31
PEX16-206ENST00000527371 TOP2BQ02880 1626 aa23.21■■□□□ 1.31
PEX16-206ENST00000527371 BIVM-ERCC5R4GMW8 1640 aa23.19■■□□□ 1.3
PEX16-206ENST00000527371 ADAMTS12P58397 1594 aa23.16■■□□□ 1.3
PEX16-206ENST00000527371 NUP160Q12769 1436 aa23.16■■□□□ 1.3
PEX16-206ENST00000527371 ERCC6L2Q5T890 1561 aa23.14■■□□□ 1.3
PEX16-206ENST00000527371 FHAD1B1AJZ9 1412 aa23.14■■□□□ 1.29
PEX16-206ENST00000527371 CEP170Q5SW79 1584 aa23.13■■□□□ 1.29
PEX16-206ENST00000527371 ERICH3Q5RHP9 1530 aa23.08■■□□□ 1.29
PEX16-206ENST00000527371 SHROOM2Q13796 1616 aa23.02■■□□□ 1.28
PEX16-206ENST00000527371 JPH4Q96JJ6 628 aa22.98■■□□□ 1.27
PEX16-206ENST00000527371 PRG4Q92954 1404 aaPredicted RBP22.96■■□□□ 1.27
PEX16-206ENST00000527371 IGF1RP08069 1367 aa22.85■■□□□ 1.25
PEX16-206ENST00000527371 RUSC2Q8N2Y8 1516 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms