RNA–Protein interactions for RNA: ENST00000527342.1

CREB3L1-201, Transcript of cAMP responsive element binding protein 3 like 1, humanhuman

TSL 3

Gene CREB3L1, Length 438 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L1-201ENST00000527342 NISCHQ9Y2I1 1504 aa14.77□□□□□ -0.04
CREB3L1-201ENST00000527342 ABCC9O60706 1549 aa13.49□□□□□ -0.25
CREB3L1-201ENST00000527342 CCDC180Q9P1Z9 1646 aa13.43□□□□□ -0.26
CREB3L1-201ENST00000527342 DNAJC5BQ9UF47 199 aa12.79□□□□□ -0.36
CREB3L1-201ENST00000527342 UNC13AQ9UPW8 1703 aa12.78□□□□□ -0.36
CREB3L1-201ENST00000527342 RB1CC1Q8TDY2 1594 aa12.77□□□□□ -0.37
CREB3L1-201ENST00000527342 NACADO15069 1562 aa12.6□□□□□ -0.39
CREB3L1-201ENST00000527342 BICRAQ9NZM4 1560 aa12.51□□□□□ -0.41
CREB3L1-201ENST00000527342 DCAF8L2P0C7V8 631 aa12.48□□□□□ -0.41
CREB3L1-201ENST00000527342 PABPN1Q86U42 306 aaKnown RBP eCLIP12.42□□□□□ -0.42
CREB3L1-201ENST00000527342 MYO15BQ96JP2 1530 aa12.33□□□□□ -0.44
CREB3L1-201ENST00000527342 ZCCHC6Q5VYS8 1495 aaKnown RBP12.3□□□□□ -0.44
CREB3L1-201ENST00000527342 DCAF1Q9Y4B6 1507 aa12.27□□□□□ -0.45
CREB3L1-201ENST00000527342 CC2D2AQ9P2K1 1620 aa12.26□□□□□ -0.45
CREB3L1-201ENST00000527342 SCRIBQ14160 1630 aa12.2□□□□□ -0.46
CREB3L1-201ENST00000527342 SHROOM4Q9ULL8 1493 aa12.16□□□□□ -0.46
CREB3L1-201ENST00000527342 EIF4G1Q04637 1599 aaKnown RBP12.15□□□□□ -0.46
CREB3L1-201ENST00000527342 CECR2Q9BXF3 1484 aa12.14□□□□□ -0.47
CREB3L1-201ENST00000527342 DNAJC5Q9H3Z4 198 aa11.8□□□□□ -0.52
CREB3L1-201ENST00000527342 CUX2O14529 1486 aa11.68□□□□□ -0.54
CREB3L1-201ENST00000527342 SMARCA4P51532 1647 aa11.61□□□□□ -0.55
CREB3L1-201ENST00000527342 THOC2Q8NI27 1593 aaKnown RBP11.6□□□□□ -0.55
CREB3L1-201ENST00000527342 ERCC6Q03468 1493 aa11.6□□□□□ -0.55
CREB3L1-201ENST00000527342 KIF21AQ7Z4S6 1674 aa11.59□□□□□ -0.55
CREB3L1-201ENST00000527342 NESP48681 1621 aa11.58□□□□□ -0.56
CREB3L1-201ENST00000527342 HMGXB3Q12766 1538 aa11.58□□□□□ -0.56
CREB3L1-201ENST00000527342 NCAPD3P42695 1498 aa11.57□□□□□ -0.56
CREB3L1-201ENST00000527342 ATAD2BQ9ULI0 1458 aa11.55□□□□□ -0.56
CREB3L1-201ENST00000527342 SMARCA2P51531 1590 aa11.53□□□□□ -0.56
CREB3L1-201ENST00000527342 BAZ1AQ9NRL2 1556 aaPredicted RBP11.5□□□□□ -0.57
CREB3L1-201ENST00000527342 PEG3Q9GZU2 1588 aa11.46□□□□□ -0.57
CREB3L1-201ENST00000527342 LAMC3Q9Y6N6 1575 aa11.44□□□□□ -0.58
CREB3L1-201ENST00000527342 BAZ1BQ9UIG0 1483 aaKnown RBP11.44□□□□□ -0.58
CREB3L1-201ENST00000527342 MROH2BQ7Z745 1585 aa11.37□□□□□ -0.59
CREB3L1-201ENST00000527342 WIZO95785 1651 aa11.3□□□□□ -0.6
CREB3L1-201ENST00000527342 WDR62O43379 1518 aa11.3□□□□□ -0.6
CREB3L1-201ENST00000527342 RSF1Q96T23 1441 aaPredicted RBP11.28□□□□□ -0.6
CREB3L1-201ENST00000527342 MRC2Q9UBG0 1479 aa11.25□□□□□ -0.61
CREB3L1-201ENST00000527342 PRDM2Q13029 1718 aa11.25□□□□□ -0.61
CREB3L1-201ENST00000527342 PDS5BQ9NTI5 1447 aa11.24□□□□□ -0.61
CREB3L1-201ENST00000527342 TRIM41Q8WV44 630 aa11.21□□□□□ -0.61
CREB3L1-201ENST00000527342 CADPSQ9ULU8 1353 aa11.17□□□□□ -0.62
CREB3L1-201ENST00000527342 CEP164Q9UPV0 1460 aa11.16□□□□□ -0.62
CREB3L1-201ENST00000527342 TOP2AP11388 1531 aaKnown RBP11.15□□□□□ -0.62
CREB3L1-201ENST00000527342 SUPT5HO00267 1087 aaKnown RBP11.13□□□□□ -0.63
CREB3L1-201ENST00000527342 RIMBP3CA6NJZ7 1639 aa11.13□□□□□ -0.63
CREB3L1-201ENST00000527342 RIMBP3BA6NNM3 1639 aa11.13□□□□□ -0.63
CREB3L1-201ENST00000527342 RIMBP3Q9UFD9 1639 aa11.13□□□□□ -0.63
CREB3L1-201ENST00000527342 FANCD2Q9BXW9 1451 aa11.12□□□□□ -0.63
CREB3L1-201ENST00000527342 URB2Q14146 1524 aaKnown RBP11.11□□□□□ -0.63
CREB3L1-201ENST00000527342 CHD1O14646 1710 aa11.06□□□□□ -0.64
CREB3L1-201ENST00000527342 CFTRP13569 1480 aa11.06□□□□□ -0.64
CREB3L1-201ENST00000527342 EIF4G3O43432 1585 aaKnown RBP11.02□□□□□ -0.65
CREB3L1-201ENST00000527342 CCDC88BA6NC98 1476 aa11.01□□□□□ -0.65
CREB3L1-201ENST00000527342 ZNF608Q9ULD9 1512 aaPredicted RBP10.99□□□□□ -0.65
CREB3L1-201ENST00000527342 ARHGEF11O15085 1522 aa10.99□□□□□ -0.65
CREB3L1-201ENST00000527342 OSCARQ8IYS5 282 aa10.95□□□□□ -0.66
CREB3L1-201ENST00000527342 TARBP1Q13395 1621 aaKnown RBP10.94□□□□□ -0.66
CREB3L1-201ENST00000527342 TOPBP1Q92547 1522 aa10.93□□□□□ -0.66
CREB3L1-201ENST00000527342 IFT140Q96RY7 1462 aa10.92□□□□□ -0.66
CREB3L1-201ENST00000527342 DNMBPQ6XZF7 1577 aa10.9□□□□□ -0.66
CREB3L1-201ENST00000527342 ABCC8Q09428 1581 aa10.89□□□□□ -0.67
CREB3L1-201ENST00000527342 ARAP1Q96P48 1450 aa10.87□□□□□ -0.67
CREB3L1-201ENST00000527342 WDR97A6NE52 1622 aa10.84□□□□□ -0.67
CREB3L1-201ENST00000527342 PBRM1Q86U86 1689 aa10.81□□□□□ -0.68
CREB3L1-201ENST00000527342 AQRO60306 1485 aaKnown RBP eCLIP10.81□□□□□ -0.68
CREB3L1-201ENST00000527342 CLASP1Q7Z460 1538 aa10.8□□□□□ -0.68
CREB3L1-201ENST00000527342 POLA1P09884 1462 aaPredicted RBP10.8□□□□□ -0.68
CREB3L1-201ENST00000527342 RAD54L2Q9Y4B4 1467 aa10.75□□□□□ -0.69
CREB3L1-201ENST00000527342 CYB5RLQ6IPT4 315 aa10.74□□□□□ -0.69
CREB3L1-201ENST00000527342 SNAPC4Q5SXM2 1469 aa10.74□□□□□ -0.69
CREB3L1-201ENST00000527342 SYNJ1O43426 1573 aa10.72□□□□□ -0.69
CREB3L1-201ENST00000527342 CUX1P39880 1505 aa10.7□□□□□ -0.7
CREB3L1-201ENST00000527342 FGD5Q6ZNL6 1462 aa10.7□□□□□ -0.7
CREB3L1-201ENST00000527342 SOGA1O94964 1423 aa10.7□□□□□ -0.7
CREB3L1-201ENST00000527342 WRNQ14191 1432 aaPredicted RBP eCLIP10.7□□□□□ -0.7
CREB3L1-201ENST00000527342 KIF13AQ9H1H9 1805 aa10.68□□□□□ -0.7
CREB3L1-201ENST00000527342 ABCA5Q8WWZ7 1642 aa10.68□□□□□ -0.7
CREB3L1-201ENST00000527342 TRHP20396 242 aaPredicted RBP10.67□□□□□ -0.7
CREB3L1-201ENST00000527342 TDRD9Q8NDG6 1382 aaKnown RBP10.66□□□□□ -0.7
CREB3L1-201ENST00000527342 ERCC6L2Q5T890 1561 aa10.66□□□□□ -0.7
CREB3L1-201ENST00000527342 MAGI1Q96QZ7 1491 aaPredicted RBP10.66□□□□□ -0.7
CREB3L1-201ENST00000527342 FBLN2P98095 1184 aa10.65□□□□□ -0.7
CREB3L1-201ENST00000527342 SYNJ2O15056 1496 aa10.62□□□□□ -0.71
CREB3L1-201ENST00000527342 GRIN2BQ13224 1484 aa10.61□□□□□ -0.71
CREB3L1-201ENST00000527342 GAPVD1Q14C86 1478 aa10.6□□□□□ -0.71
CREB3L1-201ENST00000527342 ADAMTS12P58397 1594 aa10.6□□□□□ -0.71
CREB3L1-201ENST00000527342 SHROOM2Q13796 1616 aa10.59□□□□□ -0.71
CREB3L1-201ENST00000527342 CEP170Q5SW79 1584 aa10.59□□□□□ -0.71
CREB3L1-201ENST00000527342 TOP2BQ02880 1626 aa10.58□□□□□ -0.72
CREB3L1-201ENST00000527342 CHMP7Q8WUX9 453 aaPredicted RBP10.57□□□□□ -0.72
CREB3L1-201ENST00000527342 ABCA10Q8WWZ4 1543 aa10.57□□□□□ -0.72
CREB3L1-201ENST00000527342 BIVM-ERCC5R4GMW8 1640 aa10.55□□□□□ -0.72
CREB3L1-201ENST00000527342 KIF27Q86VH2 1401 aa10.53□□□□□ -0.72
CREB3L1-201ENST00000527342 GRIN2AQ12879 1464 aa10.53□□□□□ -0.72
CREB3L1-201ENST00000527342 NUP160Q12769 1436 aa10.49□□□□□ -0.73
CREB3L1-201ENST00000527342 TSPOAP1O95153 1857 aa10.49□□□□□ -0.73
CREB3L1-201ENST00000527342 AEBP2Q6ZN18 517 aaPredicted RBP10.47□□□□□ -0.73
CREB3L1-201ENST00000527342 FHAD1B1AJZ9 1412 aa10.47□□□□□ -0.73
CREB3L1-201ENST00000527342 RUSC2Q8N2Y8 1516 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms