RNA–Protein interactions for RNA: ENST00000527238.5

PKNOX2-203, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 4

Gene PKNOX2, Length 545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-203ENST00000527238 NISCHQ9Y2I1 1504 aa19.91■□□□□ 0.78
PKNOX2-203ENST00000527238 CCDC180Q9P1Z9 1646 aa17.75■□□□□ 0.43
PKNOX2-203ENST00000527238 ABCC9O60706 1549 aa17.67■□□□□ 0.42
PKNOX2-203ENST00000527238 RB1CC1Q8TDY2 1594 aa16.77■□□□□ 0.27
PKNOX2-203ENST00000527238 DCAF8L2P0C7V8 631 aa16.72■□□□□ 0.27
PKNOX2-203ENST00000527238 NACADO15069 1562 aa16.67■□□□□ 0.26
PKNOX2-203ENST00000527238 UNC13AQ9UPW8 1703 aa16.61■□□□□ 0.25
PKNOX2-203ENST00000527238 ZCCHC6Q5VYS8 1495 aaKnown RBP16.57■□□□□ 0.24
PKNOX2-203ENST00000527238 PABPN1Q86U42 306 aaKnown RBP eCLIP16.48■□□□□ 0.23
PKNOX2-203ENST00000527238 MYO15BQ96JP2 1530 aa16.43■□□□□ 0.22
PKNOX2-203ENST00000527238 BICRAQ9NZM4 1560 aa16.41■□□□□ 0.22
PKNOX2-203ENST00000527238 DNAJC5BQ9UF47 199 aa16.4■□□□□ 0.22
PKNOX2-203ENST00000527238 SCRIBQ14160 1630 aa16.35■□□□□ 0.21
PKNOX2-203ENST00000527238 DCAF1Q9Y4B6 1507 aa16.34■□□□□ 0.21
PKNOX2-203ENST00000527238 CC2D2AQ9P2K1 1620 aa15.95■□□□□ 0.14
PKNOX2-203ENST00000527238 SHROOM4Q9ULL8 1493 aa15.94■□□□□ 0.14
PKNOX2-203ENST00000527238 EIF4G1Q04637 1599 aaKnown RBP15.93■□□□□ 0.14
PKNOX2-203ENST00000527238 CECR2Q9BXF3 1484 aa15.81■□□□□ 0.12
PKNOX2-203ENST00000527238 SMARCA4P51532 1647 aa15.54■□□□□ 0.08
PKNOX2-203ENST00000527238 ATAD2BQ9ULI0 1458 aa15.45■□□□□ 0.06
PKNOX2-203ENST00000527238 MROH2BQ7Z745 1585 aa15.44■□□□□ 0.06
PKNOX2-203ENST00000527238 BAZ1AQ9NRL2 1556 aaPredicted RBP15.4■□□□□ 0.06
PKNOX2-203ENST00000527238 NCAPD3P42695 1498 aa15.38■□□□□ 0.05
PKNOX2-203ENST00000527238 SMARCA2P51531 1590 aa15.34■□□□□ 0.05
PKNOX2-203ENST00000527238 HMGXB3Q12766 1538 aa15.33■□□□□ 0.05
PKNOX2-203ENST00000527238 WIZO95785 1651 aa15.31■□□□□ 0.04
PKNOX2-203ENST00000527238 BAZ1BQ9UIG0 1483 aaKnown RBP15.3■□□□□ 0.04
PKNOX2-203ENST00000527238 NESP48681 1621 aa15.29■□□□□ 0.04
PKNOX2-203ENST00000527238 PEG3Q9GZU2 1588 aa15.29■□□□□ 0.04
PKNOX2-203ENST00000527238 SUPT5HO00267 1087 aaKnown RBP15.2■□□□□ 0.02
PKNOX2-203ENST00000527238 ERCC6Q03468 1493 aa15.14■□□□□ 0.01
PKNOX2-203ENST00000527238 RSF1Q96T23 1441 aaPredicted RBP15.14■□□□□ 0.01
PKNOX2-203ENST00000527238 KIF21AQ7Z4S6 1674 aa15.1■□□□□ 0.01
PKNOX2-203ENST00000527238 THOC2Q8NI27 1593 aaKnown RBP15.05■□□□□ -0
PKNOX2-203ENST00000527238 LAMC3Q9Y6N6 1575 aa15.02■□□□□ -0
PKNOX2-203ENST00000527238 TOP2AP11388 1531 aaKnown RBP15.02□□□□□ -0.01
PKNOX2-203ENST00000527238 CUX2O14529 1486 aa14.97□□□□□ -0.01
PKNOX2-203ENST00000527238 CADPSQ9ULU8 1353 aa14.94□□□□□ -0.02
PKNOX2-203ENST00000527238 PDS5BQ9NTI5 1447 aa14.87□□□□□ -0.03
PKNOX2-203ENST00000527238 CCDC88BA6NC98 1476 aa14.85□□□□□ -0.03
PKNOX2-203ENST00000527238 CFTRP13569 1480 aa14.84□□□□□ -0.03
PKNOX2-203ENST00000527238 FANCD2Q9BXW9 1451 aa14.84□□□□□ -0.03
PKNOX2-203ENST00000527238 MRC2Q9UBG0 1479 aa14.83□□□□□ -0.03
PKNOX2-203ENST00000527238 CEP164Q9UPV0 1460 aa14.82□□□□□ -0.04
PKNOX2-203ENST00000527238 WDR62O43379 1518 aa14.82□□□□□ -0.04
PKNOX2-203ENST00000527238 PRDM2Q13029 1718 aa14.8□□□□□ -0.04
PKNOX2-203ENST00000527238 URB2Q14146 1524 aaKnown RBP14.77□□□□□ -0.04
PKNOX2-203ENST00000527238 DNAJC5Q9H3Z4 198 aa14.72□□□□□ -0.05
PKNOX2-203ENST00000527238 CHIC1Q5VXU3 224 aa14.66□□□□□ -0.06
PKNOX2-203ENST00000527238 TOPBP1Q92547 1522 aa14.61□□□□□ -0.07
PKNOX2-203ENST00000527238 ZNF608Q9ULD9 1512 aaPredicted RBP14.59□□□□□ -0.07
PKNOX2-203ENST00000527238 DNMBPQ6XZF7 1577 aa14.55□□□□□ -0.08
PKNOX2-203ENST00000527238 EIF4G3O43432 1585 aaKnown RBP14.5□□□□□ -0.09
PKNOX2-203ENST00000527238 CUX1P39880 1505 aa14.49□□□□□ -0.09
PKNOX2-203ENST00000527238 TARBP1Q13395 1621 aaKnown RBP14.48□□□□□ -0.09
PKNOX2-203ENST00000527238 POLA1P09884 1462 aaPredicted RBP14.48□□□□□ -0.09
PKNOX2-203ENST00000527238 RAD54L2Q9Y4B4 1467 aa14.48□□□□□ -0.09
PKNOX2-203ENST00000527238 IFT140Q96RY7 1462 aa14.46□□□□□ -0.09
PKNOX2-203ENST00000527238 AQRO60306 1485 aaKnown RBP eCLIP14.43□□□□□ -0.1
PKNOX2-203ENST00000527238 FGD5Q6ZNL6 1462 aa14.43□□□□□ -0.1
PKNOX2-203ENST00000527238 CHD1O14646 1710 aa14.4□□□□□ -0.1
PKNOX2-203ENST00000527238 ABCC8Q09428 1581 aa14.39□□□□□ -0.11
PKNOX2-203ENST00000527238 WDR97A6NE52 1622 aa14.37□□□□□ -0.11
PKNOX2-203ENST00000527238 TDRD9Q8NDG6 1382 aaKnown RBP14.35□□□□□ -0.11
PKNOX2-203ENST00000527238 TRIM41Q8WV44 630 aa14.35□□□□□ -0.11
PKNOX2-203ENST00000527238 SYNJ1O43426 1573 aa14.34□□□□□ -0.11
PKNOX2-203ENST00000527238 SOGA1O94964 1423 aa14.33□□□□□ -0.11
PKNOX2-203ENST00000527238 SNAPC4Q5SXM2 1469 aa14.3□□□□□ -0.12
PKNOX2-203ENST00000527238 PBRM1Q86U86 1689 aa14.29□□□□□ -0.12
PKNOX2-203ENST00000527238 RIMBP3CA6NJZ7 1639 aa14.27□□□□□ -0.12
PKNOX2-203ENST00000527238 RIMBP3BA6NNM3 1639 aa14.27□□□□□ -0.12
PKNOX2-203ENST00000527238 RIMBP3Q9UFD9 1639 aa14.27□□□□□ -0.12
PKNOX2-203ENST00000527238 OSCARQ8IYS5 282 aa14.27□□□□□ -0.13
PKNOX2-203ENST00000527238 BIVM-ERCC5R4GMW8 1640 aa14.26□□□□□ -0.13
PKNOX2-203ENST00000527238 WRNQ14191 1432 aaPredicted RBP eCLIP14.25□□□□□ -0.13
PKNOX2-203ENST00000527238 ABCA5Q8WWZ7 1642 aa14.25□□□□□ -0.13
PKNOX2-203ENST00000527238 TOP2BQ02880 1626 aa14.24□□□□□ -0.13
PKNOX2-203ENST00000527238 FBLN2P98095 1184 aa14.23□□□□□ -0.13
PKNOX2-203ENST00000527238 ARHGEF11O15085 1522 aa14.21□□□□□ -0.13
PKNOX2-203ENST00000527238 ABCA10Q8WWZ4 1543 aa14.2□□□□□ -0.14
PKNOX2-203ENST00000527238 GRIN2BQ13224 1484 aa14.18□□□□□ -0.14
PKNOX2-203ENST00000527238 GAPVD1Q14C86 1478 aa14.18□□□□□ -0.14
PKNOX2-203ENST00000527238 CLASP1Q7Z460 1538 aa14.15□□□□□ -0.14
PKNOX2-203ENST00000527238 ADAMTS12P58397 1594 aa14.14□□□□□ -0.15
PKNOX2-203ENST00000527238 MAGI1Q96QZ7 1491 aaPredicted RBP14.14□□□□□ -0.15
PKNOX2-203ENST00000527238 EEA1Q15075 1411 aa14.14□□□□□ -0.15
PKNOX2-203ENST00000527238 SYNJ2O15056 1496 aa14.12□□□□□ -0.15
PKNOX2-203ENST00000527238 ARAP1Q96P48 1450 aa14.12□□□□□ -0.15
PKNOX2-203ENST00000527238 CEP170Q5SW79 1584 aa14.09□□□□□ -0.15
PKNOX2-203ENST00000527238 CHMP7Q8WUX9 453 aaPredicted RBP14.08□□□□□ -0.16
PKNOX2-203ENST00000527238 ERCC6L2Q5T890 1561 aa14.08□□□□□ -0.16
PKNOX2-203ENST00000527238 GRIN2AQ12879 1464 aa14.05□□□□□ -0.16
PKNOX2-203ENST00000527238 CYB5RLQ6IPT4 315 aa14.03□□□□□ -0.16
PKNOX2-203ENST00000527238 LOC105371045A0A1W2PR82 267 aa14.02□□□□□ -0.17
PKNOX2-203ENST00000527238 ERICH3Q5RHP9 1530 aa14□□□□□ -0.17
PKNOX2-203ENST00000527238 FAM9AQ8IZU1 332 aaPredicted RBP14□□□□□ -0.17
PKNOX2-203ENST00000527238 RUSC2Q8N2Y8 1516 aa13.99□□□□□ -0.17
PKNOX2-203ENST00000527238 KIF21BO75037 1637 aa13.98□□□□□ -0.17
PKNOX2-203ENST00000527238 FHAD1B1AJZ9 1412 aa13.98□□□□□ -0.17
PKNOX2-203ENST00000527238 NUP160Q12769 1436 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms