RNA–Protein interactions for RNA: ENST00000527116.5

SNX19-205, Transcript of sorting nexin 19, humanhuman

TSL 2

Gene SNX19, Length 1,323 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-205ENST00000527116 NISCHQ9Y2I1 1504 aa21.31■■□□□ 1
SNX19-205ENST00000527116 CCDC180Q9P1Z9 1646 aa18.89■□□□□ 0.61
SNX19-205ENST00000527116 ABCC9O60706 1549 aa18.31■□□□□ 0.52
SNX19-205ENST00000527116 ZCCHC6Q5VYS8 1495 aaKnown RBP17.81■□□□□ 0.44
SNX19-205ENST00000527116 NACADO15069 1562 aa17.67■□□□□ 0.42
SNX19-205ENST00000527116 RB1CC1Q8TDY2 1594 aa17.64■□□□□ 0.41
SNX19-205ENST00000527116 MYO15BQ96JP2 1530 aa17.64■□□□□ 0.41
SNX19-205ENST00000527116 DCAF1Q9Y4B6 1507 aa17.63■□□□□ 0.41
SNX19-205ENST00000527116 DCAF8L2P0C7V8 631 aa17.55■□□□□ 0.4
SNX19-205ENST00000527116 UNC13AQ9UPW8 1703 aa17.42■□□□□ 0.38
SNX19-205ENST00000527116 BICRAQ9NZM4 1560 aa17.26■□□□□ 0.35
SNX19-205ENST00000527116 SCRIBQ14160 1630 aa17.25■□□□□ 0.35
SNX19-205ENST00000527116 PABPN1Q86U42 306 aaKnown RBP eCLIP17.11■□□□□ 0.33
SNX19-205ENST00000527116 SHROOM4Q9ULL8 1493 aa16.93■□□□□ 0.3
SNX19-205ENST00000527116 DNAJC5BQ9UF47 199 aa16.75■□□□□ 0.27
SNX19-205ENST00000527116 EIF4G1Q04637 1599 aaKnown RBP16.71■□□□□ 0.27
SNX19-205ENST00000527116 CECR2Q9BXF3 1484 aa16.64■□□□□ 0.25
SNX19-205ENST00000527116 CC2D2AQ9P2K1 1620 aa16.61■□□□□ 0.25
SNX19-205ENST00000527116 SMARCA4P51532 1647 aa16.53■□□□□ 0.24
SNX19-205ENST00000527116 MROH2BQ7Z745 1585 aa16.47■□□□□ 0.23
SNX19-205ENST00000527116 BAZ1AQ9NRL2 1556 aaPredicted RBP16.46■□□□□ 0.23
SNX19-205ENST00000527116 PEG3Q9GZU2 1588 aa16.37■□□□□ 0.21
SNX19-205ENST00000527116 ATAD2BQ9ULI0 1458 aa16.37■□□□□ 0.21
SNX19-205ENST00000527116 NCAPD3P42695 1498 aa16.33■□□□□ 0.2
SNX19-205ENST00000527116 WIZO95785 1651 aa16.3■□□□□ 0.2
SNX19-205ENST00000527116 SMARCA2P51531 1590 aa16.3■□□□□ 0.2
SNX19-205ENST00000527116 RSF1Q96T23 1441 aaPredicted RBP16.3■□□□□ 0.2
SNX19-205ENST00000527116 HMGXB3Q12766 1538 aa16.27■□□□□ 0.19
SNX19-205ENST00000527116 BAZ1BQ9UIG0 1483 aaKnown RBP16.19■□□□□ 0.18
SNX19-205ENST00000527116 TOP2AP11388 1531 aaKnown RBP16.09■□□□□ 0.17
SNX19-205ENST00000527116 NESP48681 1621 aa15.95■□□□□ 0.14
SNX19-205ENST00000527116 CCDC88BA6NC98 1476 aa15.9■□□□□ 0.14
SNX19-205ENST00000527116 SUPT5HO00267 1087 aaKnown RBP15.86■□□□□ 0.13
SNX19-205ENST00000527116 LAMC3Q9Y6N6 1575 aa15.84■□□□□ 0.13
SNX19-205ENST00000527116 CADPSQ9ULU8 1353 aa15.81■□□□□ 0.12
SNX19-205ENST00000527116 CFTRP13569 1480 aa15.8■□□□□ 0.12
SNX19-205ENST00000527116 KIF21AQ7Z4S6 1674 aa15.78■□□□□ 0.12
SNX19-205ENST00000527116 PRDM2Q13029 1718 aa15.75■□□□□ 0.11
SNX19-205ENST00000527116 THOC2Q8NI27 1593 aaKnown RBP15.7■□□□□ 0.1
SNX19-205ENST00000527116 ERCC6Q03468 1493 aa15.67■□□□□ 0.1
SNX19-205ENST00000527116 PDS5BQ9NTI5 1447 aa15.66■□□□□ 0.1
SNX19-205ENST00000527116 FANCD2Q9BXW9 1451 aa15.65■□□□□ 0.1
SNX19-205ENST00000527116 CEP164Q9UPV0 1460 aa15.6■□□□□ 0.09
SNX19-205ENST00000527116 MRC2Q9UBG0 1479 aa15.57■□□□□ 0.08
SNX19-205ENST00000527116 WDR62O43379 1518 aa15.57■□□□□ 0.08
SNX19-205ENST00000527116 URB2Q14146 1524 aaKnown RBP15.56■□□□□ 0.08
SNX19-205ENST00000527116 CUX2O14529 1486 aa15.5■□□□□ 0.07
SNX19-205ENST00000527116 TOPBP1Q92547 1522 aa15.45■□□□□ 0.06
SNX19-205ENST00000527116 DNMBPQ6XZF7 1577 aa15.44■□□□□ 0.06
SNX19-205ENST00000527116 CUX1P39880 1505 aa15.44■□□□□ 0.06
SNX19-205ENST00000527116 ABCC8Q09428 1581 aa15.4■□□□□ 0.06
SNX19-205ENST00000527116 SYNJ1O43426 1573 aa15.37■□□□□ 0.05
SNX19-205ENST00000527116 POLA1P09884 1462 aaPredicted RBP15.34■□□□□ 0.05
SNX19-205ENST00000527116 TARBP1Q13395 1621 aaKnown RBP15.33■□□□□ 0.05
SNX19-205ENST00000527116 BIVM-ERCC5R4GMW8 1640 aa15.33■□□□□ 0.04
SNX19-205ENST00000527116 FGD5Q6ZNL6 1462 aa15.31■□□□□ 0.04
SNX19-205ENST00000527116 TOP2BQ02880 1626 aa15.31■□□□□ 0.04
SNX19-205ENST00000527116 WRNQ14191 1432 aaPredicted RBP eCLIP15.29■□□□□ 0.04
SNX19-205ENST00000527116 ZNF608Q9ULD9 1512 aaPredicted RBP15.29■□□□□ 0.04
SNX19-205ENST00000527116 RAD54L2Q9Y4B4 1467 aa15.28■□□□□ 0.04
SNX19-205ENST00000527116 WDR97A6NE52 1622 aa15.27■□□□□ 0.04
SNX19-205ENST00000527116 IFT140Q96RY7 1462 aa15.26■□□□□ 0.03
SNX19-205ENST00000527116 EIF4G3O43432 1585 aaKnown RBP15.21■□□□□ 0.03
SNX19-205ENST00000527116 SOGA1O94964 1423 aa15.2■□□□□ 0.02
SNX19-205ENST00000527116 ABCA10Q8WWZ4 1543 aa15.17■□□□□ 0.02
SNX19-205ENST00000527116 AQRO60306 1485 aaKnown RBP eCLIP15.16■□□□□ 0.02
SNX19-205ENST00000527116 ABCA5Q8WWZ7 1642 aa15.15■□□□□ 0.02
SNX19-205ENST00000527116 TDRD9Q8NDG6 1382 aaKnown RBP15.13■□□□□ 0.01
SNX19-205ENST00000527116 PBRM1Q86U86 1689 aa15.09■□□□□ 0.01
SNX19-205ENST00000527116 GAPVD1Q14C86 1478 aa15.05■□□□□ -0
SNX19-205ENST00000527116 SNAPC4Q5SXM2 1469 aa15.02■□□□□ -0
SNX19-205ENST00000527116 CHD1O14646 1710 aa15.02■□□□□ -0
SNX19-205ENST00000527116 GRIN2BQ13224 1484 aa15.01□□□□□ -0.01
SNX19-205ENST00000527116 RUSC2Q8N2Y8 1516 aa14.99□□□□□ -0.01
SNX19-205ENST00000527116 ADAMTS12P58397 1594 aa14.98□□□□□ -0.01
SNX19-205ENST00000527116 ERICH3Q5RHP9 1530 aa14.96□□□□□ -0.01
SNX19-205ENST00000527116 MAGI1Q96QZ7 1491 aaPredicted RBP14.96□□□□□ -0.01
SNX19-205ENST00000527116 CHIC1Q5VXU3 224 aa14.95□□□□□ -0.02
SNX19-205ENST00000527116 TRIM41Q8WV44 630 aa14.93□□□□□ -0.02
SNX19-205ENST00000527116 SYNJ2O15056 1496 aa14.92□□□□□ -0.02
SNX19-205ENST00000527116 KIF27Q86VH2 1401 aa14.92□□□□□ -0.02
SNX19-205ENST00000527116 IGF1RP08069 1367 aa14.91□□□□□ -0.02
SNX19-205ENST00000527116 GRIN2AQ12879 1464 aa14.86□□□□□ -0.03
SNX19-205ENST00000527116 FHAD1B1AJZ9 1412 aa14.86□□□□□ -0.03
SNX19-205ENST00000527116 DNAJC5Q9H3Z4 198 aa14.86□□□□□ -0.03
SNX19-205ENST00000527116 CUL7Q14999 1698 aa14.85□□□□□ -0.03
SNX19-205ENST00000527116 CLASP1Q7Z460 1538 aa14.85□□□□□ -0.03
SNX19-205ENST00000527116 CEP170Q5SW79 1584 aa14.85□□□□□ -0.03
SNX19-205ENST00000527116 NUP160Q12769 1436 aa14.82□□□□□ -0.04
SNX19-205ENST00000527116 OSCARQ8IYS5 282 aa14.81□□□□□ -0.04
SNX19-205ENST00000527116 FBLN2P98095 1184 aa14.8□□□□□ -0.04
SNX19-205ENST00000527116 CHMP7Q8WUX9 453 aaPredicted RBP14.78□□□□□ -0.04
SNX19-205ENST00000527116 CARMIL1Q5VZK9 1371 aa14.78□□□□□ -0.04
SNX19-205ENST00000527116 PRXQ9BXM0 1461 aa14.77□□□□□ -0.04
SNX19-205ENST00000527116 SHROOM2Q13796 1616 aa14.74□□□□□ -0.05
SNX19-205ENST00000527116 RIMBP3CA6NJZ7 1639 aa14.72□□□□□ -0.05
SNX19-205ENST00000527116 RIMBP3BA6NNM3 1639 aa14.72□□□□□ -0.05
SNX19-205ENST00000527116 RIMBP3Q9UFD9 1639 aa14.72□□□□□ -0.05
SNX19-205ENST00000527116 ERCC6L2Q5T890 1561 aa14.71□□□□□ -0.05
SNX19-205ENST00000527116 RAPGEF2Q9Y4G8 1499 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms